RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PPP4R3AQ6IN85 833 aa18.99■□□□□ 0.63
BRAT1-206ENST00000493232 ZNF213O14771 459 aa18.99■□□□□ 0.63
BRAT1-206ENST00000493232 SMARCA5O60264 1052 aaPredicted RBP18.99■□□□□ 0.63
BRAT1-206ENST00000493232 WDHD1O75717 1129 aaPredicted RBP18.99■□□□□ 0.63
BRAT1-206ENST00000493232 BRPF3Q9ULD4 1205 aa18.99■□□□□ 0.63
BRAT1-206ENST00000493232 ENOX2Q16206 610 aaKnown RBP18.99■□□□□ 0.63
BRAT1-206ENST00000493232 SLC12A7Q9Y666 1083 aa18.99■□□□□ 0.63
BRAT1-206ENST00000493232 NEBLO76041 1014 aa18.99■□□□□ 0.63
BRAT1-206ENST00000493232 KIF20AO95235 890 aa18.99■□□□□ 0.63
BRAT1-206ENST00000493232 FGFR1OPO95684 399 aaKnown RBP18.99■□□□□ 0.63
BRAT1-206ENST00000493232 TMEM266Q2M3C6 531 aa18.98■□□□□ 0.63
BRAT1-206ENST00000493232 EMILIN1Q9Y6C2 1016 aa18.98■□□□□ 0.63
BRAT1-206ENST00000493232 NCOA1Q15788 1441 aa18.98■□□□□ 0.63
BRAT1-206ENST00000493232 FERMT3Q86UX7 667 aa18.98■□□□□ 0.63
BRAT1-206ENST00000493232 USHBP1Q8N6Y0 703 aa18.98■□□□□ 0.63
BRAT1-206ENST00000493232 CUL5Q93034 780 aa18.98■□□□□ 0.63
BRAT1-206ENST00000493232 RPGRQ92834 1020 aaKnown RBP18.98■□□□□ 0.63
BRAT1-206ENST00000493232 EHMT1Q9H9B1 1298 aa18.98■□□□□ 0.63
BRAT1-206ENST00000493232 LRRFIP2Q9Y608 721 aaKnown RBP18.98■□□□□ 0.63
BRAT1-206ENST00000493232 SPA17Q15506 151 aa18.97■□□□□ 0.63
BRAT1-206ENST00000493232 ABCC5O15440 1437 aa18.97■□□□□ 0.63
BRAT1-206ENST00000493232 CTAGE5O15320 804 aa18.97■□□□□ 0.63
BRAT1-206ENST00000493232 MPRIPQ6WCQ1 1025 aa18.97■□□□□ 0.63
BRAT1-206ENST00000493232 TTF1Q15361 905 aaPredicted RBP18.97■□□□□ 0.63
BRAT1-206ENST00000493232 CCDC183Q5T5S1 534 aa18.97■□□□□ 0.63
BRAT1-206ENST00000493232 PTPN23Q9H3S7 1636 aa18.97■□□□□ 0.63
BRAT1-206ENST00000493232 SFPQP23246 707 aaKnown RBP eCLIP18.97■□□□□ 0.63
BRAT1-206ENST00000493232 GBP2P32456 591 aaPredicted RBP18.97■□□□□ 0.63
BRAT1-206ENST00000493232 ZSCAN12O43309 604 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 VPS36Q86VN1 386 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 EVI5LQ96CN4 794 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 A0A087WZG4 1122 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 GBP3Q9H0R5 595 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 LIMCH1Q9UPQ0 1083 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 SCAF11Q99590 1463 aaKnown RBP18.96■□□□□ 0.63
BRAT1-206ENST00000493232 RANBP6O60518 1105 aaKnown RBP18.96■□□□□ 0.63
BRAT1-206ENST00000493232 CUL7Q14999 1698 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 EXOC5O00471 708 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 FLIIQ13045 1269 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 CCDC96Q2M329 555 aa18.96■□□□□ 0.63
BRAT1-206ENST00000493232 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
BRAT1-206ENST00000493232 CALRP27797 417 aaKnown RBP18.95■□□□□ 0.62
BRAT1-206ENST00000493232 SSRP1Q08945 709 aaKnown RBP18.95■□□□□ 0.62
BRAT1-206ENST00000493232 PCF11O94913 1555 aaKnown RBP18.95■□□□□ 0.62
BRAT1-206ENST00000493232 SYCE3A1L190 88 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 FOXO3O43524 673 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 LDHCP07864 332 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 TAX1BP1Q86VP1 789 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 CENPHQ9H3R5 247 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 CCDC194A0A1B0GVG4 234 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 GOLGA8AA7E2F4 631 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 GOLGA8BA8MQT2 603 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 IFNL2Q8IZJ0 200 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 MPNDQ8N594 471 aa18.95■□□□□ 0.62
BRAT1-206ENST00000493232 CATIPQ7Z7H3 387 aa18.94■□□□□ 0.62
BRAT1-206ENST00000493232 CDC5LQ99459 802 aaKnown RBP18.94■□□□□ 0.62
BRAT1-206ENST00000493232 ECHDC1Q9NTX5 307 aa18.94■□□□□ 0.62
BRAT1-206ENST00000493232 F6X3S4 739 aa18.94■□□□□ 0.62
BRAT1-206ENST00000493232 CCDC12Q8WUD4 166 aaPredicted RBP18.94■□□□□ 0.62
BRAT1-206ENST00000493232 SSR1P43307 286 aaKnown RBP18.94■□□□□ 0.62
BRAT1-206ENST00000493232 DHX29Q7Z478 1369 aaKnown RBP18.94■□□□□ 0.62
BRAT1-206ENST00000493232 IFIT3O14879 490 aaKnown RBP18.93■□□□□ 0.62
BRAT1-206ENST00000493232 CAMK4Q16566 473 aa18.93■□□□□ 0.62
BRAT1-206ENST00000493232 IL27Q8NEV9 243 aa18.93■□□□□ 0.62
BRAT1-206ENST00000493232 UBXN4Q92575 508 aa18.93■□□□□ 0.62
BRAT1-206ENST00000493232 ADGRF5Q8IZF2 1346 aa18.93■□□□□ 0.62
BRAT1-206ENST00000493232 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
BRAT1-206ENST00000493232 ESPNB1AK53 854 aa18.92■□□□□ 0.62
BRAT1-206ENST00000493232 CACNA2D4Q7Z3S7 1137 aa18.92■□□□□ 0.62
BRAT1-206ENST00000493232 CWC25Q9NXE8 425 aaPredicted RBP18.92■□□□□ 0.62
BRAT1-206ENST00000493232 IL16Q14005 1332 aa18.92■□□□□ 0.62
BRAT1-206ENST00000493232 IDI1Q13907 227 aa18.92■□□□□ 0.62
BRAT1-206ENST00000493232 SCLT1Q96NL6 688 aa18.92■□□□□ 0.62
BRAT1-206ENST00000493232 UQCRHLA0A096LP55 91 aa18.91■□□□□ 0.62
BRAT1-206ENST00000493232 UQCRHP07919 91 aa18.91■□□□□ 0.62
BRAT1-206ENST00000493232 NLRP5P59047 1200 aa18.91■□□□□ 0.62
BRAT1-206ENST00000493232 KIF5BP33176 963 aa18.91■□□□□ 0.62
BRAT1-206ENST00000493232 KRT28Q7Z3Y7 464 aa18.91■□□□□ 0.62
BRAT1-206ENST00000493232 PYM1Q9BRP8 204 aaKnown RBP18.91■□□□□ 0.62
BRAT1-206ENST00000493232 PLB1Q6P1J6 1458 aa18.91■□□□□ 0.62
BRAT1-206ENST00000493232 BAG4O95429 457 aaKnown RBP18.91■□□□□ 0.62
BRAT1-206ENST00000493232 DDX19AQ9NUU7 478 aaKnown RBP18.91■□□□□ 0.62
BRAT1-206ENST00000493232 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
BRAT1-206ENST00000493232 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 ADAMTS2O95450 1211 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 RBM10P98175 930 aaKnown RBP18.9■□□□□ 0.62
BRAT1-206ENST00000493232 PDCL2Q8N4E4 241 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 ANKRD36BQ8N2N9 1353 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 DENND4BO75064 1496 aaPredicted RBP18.9■□□□□ 0.62
BRAT1-206ENST00000493232 KIF5CO60282 957 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 TOP1P11387 765 aaKnown RBP18.9■□□□□ 0.62
BRAT1-206ENST00000493232 FAM193AP78312 1265 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 SPTY2D1Q68D10 685 aaPredicted RBP18.9■□□□□ 0.62
BRAT1-206ENST00000493232 ZSCAN30Q86W11 494 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 KLHL10Q6JEL2 608 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 PPP1R42Q7Z4L9 355 aa18.9■□□□□ 0.62
BRAT1-206ENST00000493232 TRIM27P14373 513 aa18.89■□□□□ 0.62
BRAT1-206ENST00000493232 NOS1P29475 1434 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms