RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
LRTM1-202ENST00000493075 DDX10Q13206 875 aaKnown RBP15.27■□□□□ 0.04
LRTM1-202ENST00000493075 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
LRTM1-202ENST00000493075 PLEKHF1Q96S99 279 aa15.27■□□□□ 0.04
LRTM1-202ENST00000493075 TJP1Q07157 1748 aa15.27■□□□□ 0.04
LRTM1-202ENST00000493075 MYH14Q7Z406 1995 aaKnown RBP15.26■□□□□ 0.03
LRTM1-202ENST00000493075 MCM10Q7L590 875 aa15.26■□□□□ 0.03
LRTM1-202ENST00000493075 C10orf71Q711Q0 1435 aa15.26■□□□□ 0.03
LRTM1-202ENST00000493075 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
LRTM1-202ENST00000493075 KCNQ3O43525 872 aa15.25■□□□□ 0.03
LRTM1-202ENST00000493075 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
LRTM1-202ENST00000493075 IL6STP40189 918 aaPredicted RBP15.25■□□□□ 0.03
LRTM1-202ENST00000493075 DDR1Q08345 913 aa15.25■□□□□ 0.03
LRTM1-202ENST00000493075 TAF7Q15545 349 aaPredicted RBP15.25■□□□□ 0.03
LRTM1-202ENST00000493075 COL15A1P39059 1388 aa15.25■□□□□ 0.03
LRTM1-202ENST00000493075 A0A0G2JLW4 131 aa15.24■□□□□ 0.03
LRTM1-202ENST00000493075 BCL2L12Q9HB09 334 aa15.24■□□□□ 0.03
LRTM1-202ENST00000493075 PXDNLA1KZ92 1463 aa15.24■□□□□ 0.03
LRTM1-202ENST00000493075 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
LRTM1-202ENST00000493075 DPEP1P16444 411 aa15.23■□□□□ 0.03
LRTM1-202ENST00000493075 DCTN1Q14203 1278 aa15.23■□□□□ 0.03
LRTM1-202ENST00000493075 KCNA3P22001 575 aa15.22■□□□□ 0.03
LRTM1-202ENST00000493075 NFIXQ14938 502 aa15.22■□□□□ 0.03
LRTM1-202ENST00000493075 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
LRTM1-202ENST00000493075 PNISRQ8TF01 805 aaKnown RBP15.22■□□□□ 0.03
LRTM1-202ENST00000493075 A1BGP04217 495 aa15.21■□□□□ 0.03
LRTM1-202ENST00000493075 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
LRTM1-202ENST00000493075 USP16Q9Y5T5 823 aa15.21■□□□□ 0.03
LRTM1-202ENST00000493075 UBR2Q8IWV8 1755 aa15.21■□□□□ 0.02
LRTM1-202ENST00000493075 C4AP0C0L4 1744 aa15.21■□□□□ 0.02
LRTM1-202ENST00000493075 GOLGB1Q14789 3259 aaKnown RBP15.21■□□□□ 0.02
LRTM1-202ENST00000493075 MYBBP1AQ9BQG0 1328 aaKnown RBP15.2■□□□□ 0.02
LRTM1-202ENST00000493075 SERPINB2P05120 415 aa15.2■□□□□ 0.02
LRTM1-202ENST00000493075 PIM2Q9P1W9 311 aa15.2■□□□□ 0.02
LRTM1-202ENST00000493075 BCS1LQ9Y276 419 aa15.2■□□□□ 0.02
LRTM1-202ENST00000493075 MAPK8IP3Q9UPT6 1336 aa15.19■□□□□ 0.02
LRTM1-202ENST00000493075 WWC3Q9ULE0 1092 aa15.19■□□□□ 0.02
LRTM1-202ENST00000493075 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
LRTM1-202ENST00000493075 CHD4Q14839 1912 aa15.18■□□□□ 0.02
LRTM1-202ENST00000493075 SIPA1L3O60292 1781 aaPredicted RBP15.18■□□□□ 0.02
LRTM1-202ENST00000493075 RGL2O15211 777 aa15.17■□□□□ 0.02
LRTM1-202ENST00000493075 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
LRTM1-202ENST00000493075 DALRD3Q5D0E6 543 aaKnown RBP15.17■□□□□ 0.02
LRTM1-202ENST00000493075 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
LRTM1-202ENST00000493075 KIF13BQ9NQT8 1826 aa15.17■□□□□ 0.02
LRTM1-202ENST00000493075 PRAMEF22A3QJZ6 481 aa15.17■□□□□ 0.02
LRTM1-202ENST00000493075 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
LRTM1-202ENST00000493075 TBC1D9BQ66K14 1250 aa15.17■□□□□ 0.02
LRTM1-202ENST00000493075 CLEC4GQ6UXB4 293 aa15.17■□□□□ 0.02
LRTM1-202ENST00000493075 ZNF330Q9Y3S2 320 aaPredicted RBP15.17■□□□□ 0.02
LRTM1-202ENST00000493075 CHRNA5P30532 468 aa15.16■□□□□ 0.02
LRTM1-202ENST00000493075 ARHGAP27Q6ZUM4 889 aa15.16■□□□□ 0.02
LRTM1-202ENST00000493075 DZIP3Q86Y13 1208 aaKnown RBP15.16■□□□□ 0.02
LRTM1-202ENST00000493075 BABAM1Q9NWV8 329 aa15.16■□□□□ 0.02
LRTM1-202ENST00000493075 PDZRN3Q9UPQ7 1066 aa15.16■□□□□ 0.02
LRTM1-202ENST00000493075 VIRMAQ69YN4 1812 aaKnown RBP15.15■□□□□ 0.02
LRTM1-202ENST00000493075 ADCY9O60503 1353 aa15.15■□□□□ 0.02
LRTM1-202ENST00000493075 NBPF26B4DH59 902 aa15.15■□□□□ 0.02
LRTM1-202ENST00000493075 GIGYF1O75420 1035 aaPredicted RBP15.15■□□□□ 0.02
LRTM1-202ENST00000493075 RIPK4P57078 832 aa15.15■□□□□ 0.02
LRTM1-202ENST00000493075 EIF4A1P60842 406 aaKnown RBP15.15■□□□□ 0.02
LRTM1-202ENST00000493075 NBPF10Q6P3W6 841 aaKnown RBP15.15■□□□□ 0.02
LRTM1-202ENST00000493075 BICDL1Q6ZP65 573 aa15.15■□□□□ 0.02
LRTM1-202ENST00000493075 NBPF15Q8N660 670 aa15.15■□□□□ 0.02
LRTM1-202ENST00000493075 SETDB2Q96T68 719 aa15.15■□□□□ 0.02
LRTM1-202ENST00000493075 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
LRTM1-202ENST00000493075 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
LRTM1-202ENST00000493075 C1QTNF8P60827 252 aa15.14■□□□□ 0.01
LRTM1-202ENST00000493075 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
LRTM1-202ENST00000493075 BRIP1Q9BX63 1249 aa15.14■□□□□ 0.01
LRTM1-202ENST00000493075 ATP10DQ9P241 1426 aa15.14■□□□□ 0.01
LRTM1-202ENST00000493075 KIAA1551Q9HCM1 1747 aa15.13■□□□□ 0.01
LRTM1-202ENST00000493075 H0YIN7 160 aa15.13■□□□□ 0.01
LRTM1-202ENST00000493075 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
LRTM1-202ENST00000493075 ZNF652Q9Y2D9 606 aa15.13■□□□□ 0.01
LRTM1-202ENST00000493075 CARMIL3Q8ND23 1372 aa15.12■□□□□ 0.01
LRTM1-202ENST00000493075 PDE6BP35913 854 aa15.12■□□□□ 0.01
LRTM1-202ENST00000493075 PIP4K2AP48426 406 aaPredicted RBP15.12■□□□□ 0.01
LRTM1-202ENST00000493075 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
LRTM1-202ENST00000493075 PRR5LQ6MZQ0 368 aa15.12■□□□□ 0.01
LRTM1-202ENST00000493075 RUNDC1Q96C34 613 aa15.12■□□□□ 0.01
LRTM1-202ENST00000493075 GPBP1L1Q9HC44 474 aaPredicted RBP15.12■□□□□ 0.01
LRTM1-202ENST00000493075 C2CD5Q86YS7 1000 aa15.11■□□□□ 0.01
LRTM1-202ENST00000493075 TTLL6Q8N841 843 aa15.11■□□□□ 0.01
LRTM1-202ENST00000493075 ADAMTS8Q9UP79 889 aa15.11■□□□□ 0.01
LRTM1-202ENST00000493075 TSPYL4Q9UJ04 414 aa15.1■□□□□ 0.01
LRTM1-202ENST00000493075 NRXN2Q9P2S2 1712 aa15.09■□□□□ 0.01
LRTM1-202ENST00000493075 N4BP2Q86UW6 1770 aaPredicted RBP15.09■□□□□ 0.01
LRTM1-202ENST00000493075 ERVV-1B6SEH8 477 aa15.09■□□□□ 0.01
LRTM1-202ENST00000493075 CNBD1Q8NA66 436 aa15.09■□□□□ 0.01
LRTM1-202ENST00000493075 ERBB4Q15303 1308 aa15.08■□□□□ 0.01
LRTM1-202ENST00000493075 ST5P78524 1137 aa15.08■□□□□ 0
LRTM1-202ENST00000493075 C9orf131Q5VYM1 1079 aa15.08■□□□□ 0
LRTM1-202ENST00000493075 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
LRTM1-202ENST00000493075 NBPF5PQ86XG9 351 aaPredicted RBP15.07■□□□□ 0
LRTM1-202ENST00000493075 CCDC146Q8IYE0 955 aa15.07■□□□□ 0
LRTM1-202ENST00000493075 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
LRTM1-202ENST00000493075 CHL1O00533 1208 aa15.06■□□□□ 0
LRTM1-202ENST00000493075 NPHP1O15259 732 aa15.06■□□□□ 0
LRTM1-202ENST00000493075 NEUROD2Q15784 382 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms