RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 WWC3Q9ULE0 1092 aa21.86■■□□□ 1.09
C9orf78-206ENST00000492991 BCS1LQ9Y276 419 aa21.86■■□□□ 1.09
C9orf78-206ENST00000492991 FCHSD2O94868 740 aa21.85■■□□□ 1.09
C9orf78-206ENST00000492991 USPL1Q5W0Q7 1092 aa21.85■■□□□ 1.09
C9orf78-206ENST00000492991 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
C9orf78-206ENST00000492991 ZBTB1Q9Y2K1 713 aa21.85■■□□□ 1.09
C9orf78-206ENST00000492991 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
C9orf78-206ENST00000492991 PRKAR2BP31323 418 aa21.84■■□□□ 1.09
C9orf78-206ENST00000492991 PHACTR3Q96KR7 559 aa21.84■■□□□ 1.09
C9orf78-206ENST00000492991 COL15A1P39059 1388 aa21.84■■□□□ 1.09
C9orf78-206ENST00000492991 UBR2Q8IWV8 1755 aa21.84■■□□□ 1.09
C9orf78-206ENST00000492991 A0A087WZG4 1122 aa21.83■■□□□ 1.09
C9orf78-206ENST00000492991 EIF5P55010 431 aaKnown RBP21.83■■□□□ 1.09
C9orf78-206ENST00000492991 ZNF496Q96IT1 587 aaPredicted RBP21.83■■□□□ 1.09
C9orf78-206ENST00000492991 HEG1Q9ULI3 1381 aa21.83■■□□□ 1.08
C9orf78-206ENST00000492991 SENP3-EIF4A1A0A087X0R7 540 aa21.82■■□□□ 1.08
C9orf78-206ENST00000492991 N4BP2Q86UW6 1770 aaPredicted RBP21.82■■□□□ 1.08
C9orf78-206ENST00000492991 NFIXQ14938 502 aa21.81■■□□□ 1.08
C9orf78-206ENST00000492991 FMNL2Q96PY5 1086 aa21.81■■□□□ 1.08
C9orf78-206ENST00000492991 BCL2L12Q9HB09 334 aa21.81■■□□□ 1.08
C9orf78-206ENST00000492991 HTATSF1O43719 755 aaKnown RBP21.8■■□□□ 1.08
C9orf78-206ENST00000492991 U2AF1L5P0DN76 240 aaPredicted RBP21.8■■□□□ 1.08
C9orf78-206ENST00000492991 U2AF1Q01081 240 aaKnown RBP eCLIP21.8■■□□□ 1.08
C9orf78-206ENST00000492991 DALRD3Q5D0E6 543 aaKnown RBP21.8■■□□□ 1.08
C9orf78-206ENST00000492991 ARHGAP27Q6ZUM4 889 aa21.8■■□□□ 1.08
C9orf78-206ENST00000492991 CANXP27824 592 aaKnown RBP21.79■■□□□ 1.08
C9orf78-206ENST00000492991 BRCA1P38398 1863 aaKnown RBP21.78■■□□□ 1.08
C9orf78-206ENST00000492991 IL6STP40189 918 aaPredicted RBP21.78■■□□□ 1.08
C9orf78-206ENST00000492991 SIPA1L3O60292 1781 aaPredicted RBP21.78■■□□□ 1.08
C9orf78-206ENST00000492991 BTBD11A6QL63 1104 aa21.77■■□□□ 1.08
C9orf78-206ENST00000492991 RTF1Q92541 710 aaKnown RBP21.77■■□□□ 1.08
C9orf78-206ENST00000492991 SERPINB2P05120 415 aa21.76■■□□□ 1.07
C9orf78-206ENST00000492991 ARFGEF1Q9Y6D6 1849 aa21.75■■□□□ 1.07
C9orf78-206ENST00000492991 CHRNA5P30532 468 aa21.74■■□□□ 1.07
C9orf78-206ENST00000492991 ZNF526Q8TF50 670 aaPredicted RBP21.74■■□□□ 1.07
C9orf78-206ENST00000492991 NRXN2Q9P2S2 1712 aa21.74■■□□□ 1.07
C9orf78-206ENST00000492991 PDZRN3Q9UPQ7 1066 aa21.73■■□□□ 1.07
C9orf78-206ENST00000492991 KIF3CO14782 793 aa21.72■■□□□ 1.07
C9orf78-206ENST00000492991 KCNQ3O43525 872 aa21.71■■□□□ 1.07
C9orf78-206ENST00000492991 A1BGP04217 495 aa21.71■■□□□ 1.07
C9orf78-206ENST00000492991 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
C9orf78-206ENST00000492991 NPM2Q86SE8 214 aaKnown RBP21.71■■□□□ 1.07
C9orf78-206ENST00000492991 C9orf131Q5VYM1 1079 aa21.7■■□□□ 1.06
C9orf78-206ENST00000492991 AFDNP55196 1824 aaKnown RBP21.69■■□□□ 1.06
C9orf78-206ENST00000492991 RGL2O15211 777 aa21.69■■□□□ 1.06
C9orf78-206ENST00000492991 NEFMP07197 916 aa21.69■■□□□ 1.06
C9orf78-206ENST00000492991 TAF7Q15545 349 aaPredicted RBP21.69■■□□□ 1.06
C9orf78-206ENST00000492991 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
C9orf78-206ENST00000492991 MCM10Q7L590 875 aa21.69■■□□□ 1.06
C9orf78-206ENST00000492991 TBC1D2BQ9UPU7 963 aa21.69■■□□□ 1.06
C9orf78-206ENST00000492991 USP16Q9Y5T5 823 aa21.69■■□□□ 1.06
C9orf78-206ENST00000492991 H0YIN7 160 aa21.68■■□□□ 1.06
C9orf78-206ENST00000492991 TTLL6Q8N841 843 aa21.68■■□□□ 1.06
C9orf78-206ENST00000492991 BRIP1Q9BX63 1249 aa21.68■■□□□ 1.06
C9orf78-206ENST00000492991 CAMTA2O94983 1202 aa21.67■■□□□ 1.06
C9orf78-206ENST00000492991 HSPA6P17066 643 aa21.67■■□□□ 1.06
C9orf78-206ENST00000492991 CLEC4GQ6UXB4 293 aa21.67■■□□□ 1.06
C9orf78-206ENST00000492991 PNNQ9H307 717 aaKnown RBP21.67■■□□□ 1.06
C9orf78-206ENST00000492991 CARMIL3Q8ND23 1372 aa21.66■■□□□ 1.06
C9orf78-206ENST00000492991 TOMM70O94826 608 aa21.66■■□□□ 1.06
C9orf78-206ENST00000492991 PDE6BP35913 854 aa21.66■■□□□ 1.06
C9orf78-206ENST00000492991 BICDL1Q6ZP65 573 aa21.66■■□□□ 1.06
C9orf78-206ENST00000492991 C2CD5Q86YS7 1000 aa21.66■■□□□ 1.06
C9orf78-206ENST00000492991 SETDB2Q96T68 719 aa21.66■■□□□ 1.06
C9orf78-206ENST00000492991 ZC3H4Q9UPT8 1303 aaKnown RBP21.65■■□□□ 1.06
C9orf78-206ENST00000492991 DCTN1Q14203 1278 aa21.65■■□□□ 1.06
C9orf78-206ENST00000492991 DZIP3Q86Y13 1208 aaKnown RBP21.65■■□□□ 1.06
C9orf78-206ENST00000492991 PNISRQ8TF01 805 aaKnown RBP21.65■■□□□ 1.06
C9orf78-206ENST00000492991 PLEKHF1Q96S99 279 aa21.65■■□□□ 1.06
C9orf78-206ENST00000492991 ZNF330Q9Y3S2 320 aaPredicted RBP21.65■■□□□ 1.06
C9orf78-206ENST00000492991 PRR5LQ6MZQ0 368 aa21.64■■□□□ 1.05
C9orf78-206ENST00000492991 RNF181Q9P0P0 153 aa21.64■■□□□ 1.05
C9orf78-206ENST00000492991 SCN7AQ01118 1682 aa21.63■■□□□ 1.05
C9orf78-206ENST00000492991 KDM2BQ8NHM5 1336 aa21.62■■□□□ 1.05
C9orf78-206ENST00000492991 CEP350Q5VT06 3117 aa21.62■■□□□ 1.05
C9orf78-206ENST00000492991 DLEC1Q9Y238 1755 aa21.61■■□□□ 1.05
C9orf78-206ENST00000492991 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
C9orf78-206ENST00000492991 LMNB1P20700 586 aa21.61■■□□□ 1.05
C9orf78-206ENST00000492991 RALBP1Q15311 655 aa21.61■■□□□ 1.05
C9orf78-206ENST00000492991 NFE2L2Q16236 605 aa21.61■■□□□ 1.05
C9orf78-206ENST00000492991 ZNF652Q9Y2D9 606 aa21.61■■□□□ 1.05
C9orf78-206ENST00000492991 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
C9orf78-206ENST00000492991 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
C9orf78-206ENST00000492991 NBPF26B4DH59 902 aa21.59■■□□□ 1.05
C9orf78-206ENST00000492991 NBPF10Q6P3W6 841 aaKnown RBP21.59■■□□□ 1.05
C9orf78-206ENST00000492991 NBPF15Q8N660 670 aa21.59■■□□□ 1.05
C9orf78-206ENST00000492991 RBM46Q8TBY0 533 aaKnown RBP21.59■■□□□ 1.05
C9orf78-206ENST00000492991 SBF1O95248 1867 aa21.58■■□□□ 1.05
C9orf78-206ENST00000492991 ST5P78524 1137 aa21.58■■□□□ 1.05
C9orf78-206ENST00000492991 STYK1Q6J9G0 422 aa21.58■■□□□ 1.05
C9orf78-206ENST00000492991 CNKSR1Q969H4 720 aa21.57■■□□□ 1.04
C9orf78-206ENST00000492991 ZNF622Q969S3 477 aaKnown RBP eCLIP21.57■■□□□ 1.044e-10■■□□□ 11.7
C9orf78-206ENST00000492991 SRGNP10124 158 aa21.56■■□□□ 1.04
C9orf78-206ENST00000492991 PIP4K2AP48426 406 aaPredicted RBP21.56■■□□□ 1.04
C9orf78-206ENST00000492991 RASSF7Q02833 373 aa21.56■■□□□ 1.04
C9orf78-206ENST00000492991 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
C9orf78-206ENST00000492991 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
C9orf78-206ENST00000492991 KLRG2A4D1S0 409 aaPredicted RBP21.55■■□□□ 1.04
C9orf78-206ENST00000492991 NFKBIEO00221 500 aa21.55■■□□□ 1.04
C9orf78-206ENST00000492991 NPHP1O15259 732 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms