RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 CCDC14Q49A88 953 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 VPS36Q86VN1 386 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 PPM1EQ8WY54 764 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 TCHPQ9BT92 498 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 CCDC39Q9UFE4 941 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 CCDC88BA6NC98 1476 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 VPS37CA5D8V6 355 aaPredicted RBP6.29□□□□□ -1.4
FN1-224ENST00000492816 CACYBPQ9HB71 228 aaKnown RBP6.29□□□□□ -1.4
FN1-224ENST00000492816 ATAD2Q6PL18 1390 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 SLC8A3P57103 927 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 CDC37L1Q7L3B6 337 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 HOOK3Q86VS8 718 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 TRPC5Q9UL62 973 aaPredicted RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 IRX3P78415 501 aaPredicted RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 IFNL2Q8IZJ0 200 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 KRT23Q9C075 422 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 AQRO60306 1485 aaKnown RBP eCLIP6.28□□□□□ -1.42e-14■■■■■ 29.3
FN1-224ENST00000492816 CCDC175P0C221 793 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 CCDC191Q8NCU4 936 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 ACSBG1Q96GR2 724 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 AMOTL2Q9Y2J4 779 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 TTF1Q15361 905 aaPredicted RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 IMMTQ16891 758 aaKnown RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 GOLGA1Q92805 767 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 ERCC4Q92889 916 aaPredicted RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 CRNKL1Q9BZJ0 848 aaKnown RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 EIF4E1BA6NMX2 242 aaKnown RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 CTNNA2P26232 953 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 TNFAIP1Q13829 316 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 AFAP1Q8N556 730 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 SDF4Q9BRK5 362 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 SRCIN1Q9C0H9 1055 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 GGNBP2Q9H3C7 697 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 SYNCQ9H7C4 482 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 SH3BP5O60239 455 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 NOM1Q5C9Z4 860 aaKnown RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 ATAD2BQ9ULI0 1458 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 HMGB1P1B2RPK0 211 aaPredicted RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 ADRA2BP18089 450 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 CNGA1P29973 690 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 ERMNQ8TAM6 284 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 ORC3Q9UBD5 711 aaPredicted RBP6.28□□□□□ -1.4
FN1-224ENST00000492816 MAST3O60307 1309 aa6.28□□□□□ -1.4
FN1-224ENST00000492816 MINDY4BA8MYZ0 360 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 ENOX2Q16206 610 aaKnown RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 SYCP3Q8IZU3 236 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 MSANTD4Q8NCY6 345 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 NAPBQ9H115 298 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 RAD50Q92878 1312 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 KDM4AO75164 1064 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 PDE4AP27815 886 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 ALDH1B1P30837 517 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 UTP14CQ5TAP6 766 aaKnown RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 SREK1Q8WXA9 508 aaKnown RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 IMPG2Q9BZV3 1241 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 NAIPQ13075 1403 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 CC2D2AQ9P2K1 1620 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 DHX8Q14562 1220 aaKnown RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 SMC1AQ14683 1233 aaKnown RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 PLB1Q6P1J6 1458 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 MYBBP1AQ9BQG0 1328 aaKnown RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 STX6O43752 255 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 ARMC9Q7Z3E5 817 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 CEP57L1Q8IYX8 460 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 HINFPQ9BQA5 517 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 DDX23Q9BUQ8 820 aaKnown RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 WWC3Q9ULE0 1092 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 DENND4BO75064 1496 aaPredicted RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 GAS8O95995 478 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 LMAN1P49257 510 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 SULT6B1Q6IMI4 303 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 MYD88Q99836 296 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 MBIPQ9NS73 344 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 TMEM132EQ6IEE7 984 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 ZCRB1Q8TBF4 217 aaKnown RBP6.27□□□□□ -1.41
FN1-224ENST00000492816 AS3MTQ9HBK9 375 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 CCDC61Q9Y6R9 512 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 SNX16P57768 344 aa6.27□□□□□ -1.41
FN1-224ENST00000492816 FOXD4L5Q5VV16 416 aaPredicted RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 FOXD4L4Q8WXT5 416 aaPredicted RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 FAM193BQ96PV7 902 aaPredicted RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 TRIM6Q9C030 488 aaPredicted RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 LRRC27Q9C0I9 530 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 TNRQ92752 1358 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 GOLGA6L10A6NI86 522 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 RAB3IL1Q8TBN0 382 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 ANKRD2Q9GZV1 360 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 PHACTR2O75167 634 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 CFAP70Q5T0N1 1121 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 CATIPQ7Z7H3 387 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 NUTM1Q86Y26 1132 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 ZNF397Q8NF99 534 aaPredicted RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 CCNL1Q9UK58 526 aaPredicted RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 CD2APQ9Y5K6 639 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 NOP56O00567 594 aaKnown RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 KINO60870 393 aaKnown RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 UBA5Q9GZZ9 404 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 SIL1Q9H173 461 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 ACTN2P35609 894 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms