RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 NCAPD2Q15021 1401 aa8.23□□□□□ -1.09
RBM39-237ENST00000492779 KCNQ4P56696 695 aa8.23□□□□□ -1.09
RBM39-237ENST00000492779 NUCB1Q02818 461 aa8.23□□□□□ -1.09
RBM39-237ENST00000492779 BECN1Q14457 450 aa8.23□□□□□ -1.09
RBM39-237ENST00000492779 PLEKHO1Q53GL0 409 aaPredicted RBP8.23□□□□□ -1.09
RBM39-237ENST00000492779 GNAT3A8MTJ3 354 aa8.23□□□□□ -1.09
RBM39-237ENST00000492779 ZBTB7BO15156 539 aaPredicted RBP8.23□□□□□ -1.09
RBM39-237ENST00000492779 PKP1Q13835 747 aa8.23□□□□□ -1.09
RBM39-237ENST00000492779 NGEFQ8N5V2 710 aa8.23□□□□□ -1.09
RBM39-237ENST00000492779 TNPO1Q92973 898 aaKnown RBP8.23□□□□□ -1.09
RBM39-237ENST00000492779 MYH16Q9H6N6 1097 aa8.23□□□□□ -1.09
RBM39-237ENST00000492779 OVOS2A0A0G2JMS6 1433 aa8.22□□□□□ -1.09
RBM39-237ENST00000492779 DISP2A7MBM2 1401 aa8.22□□□□□ -1.09
RBM39-237ENST00000492779 ATRNO75882 1429 aa8.22□□□□□ -1.09
RBM39-237ENST00000492779 PRAMEF22A3QJZ6 481 aa8.22□□□□□ -1.09
RBM39-237ENST00000492779 C8orf58Q8NAV2 365 aa8.22□□□□□ -1.09
RBM39-237ENST00000492779 GAS2L2Q8NHY3 880 aa8.22□□□□□ -1.09
RBM39-237ENST00000492779 KDM6AO15550 1401 aaPredicted RBP8.22□□□□□ -1.09
RBM39-237ENST00000492779 VAMP4O75379 141 aa8.21□□□□□ -1.09
RBM39-237ENST00000492779 GSPT1P15170 499 aaKnown RBP8.21□□□□□ -1.09
RBM39-237ENST00000492779 C1orf141Q5JVX7 400 aa8.21□□□□□ -1.09
RBM39-237ENST00000492779 SPG7Q9UQ90 795 aa8.21□□□□□ -1.09
RBM39-237ENST00000492779 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.09
RBM39-237ENST00000492779 RNMTO43148 476 aaKnown RBP8.21□□□□□ -1.1
RBM39-237ENST00000492779 RXRBP28702 533 aa8.21□□□□□ -1.1
RBM39-237ENST00000492779 PRIM1P49642 420 aaKnown RBP8.21□□□□□ -1.1
RBM39-237ENST00000492779 ZNF772Q68DY9 489 aaPredicted RBP8.21□□□□□ -1.1
RBM39-237ENST00000492779 TBC1D9Q6ZT07 1266 aa8.21□□□□□ -1.1
RBM39-237ENST00000492779 BARGINQ6ZT62 677 aa8.21□□□□□ -1.1
RBM39-237ENST00000492779 IFNL2Q8IZJ0 200 aa8.21□□□□□ -1.1
RBM39-237ENST00000492779 SSFA2P28290 1259 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 RBM25P49756 843 aaKnown RBP8.2□□□□□ -1.1
RBM39-237ENST00000492779 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
RBM39-237ENST00000492779 RBM6P78332 1123 aaKnown RBP8.2□□□□□ -1.1
RBM39-237ENST00000492779 AMOTQ4VCS5 1084 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 AKAP4Q5JQC9 854 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 ANKRD45Q5TZF3 282 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 CHD1LQ86WJ1 897 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 RTF1Q92541 710 aaKnown RBP8.2□□□□□ -1.1
RBM39-237ENST00000492779 NECTIN2Q92692 538 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 NWD2Q9ULI1 1742 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 PIP4K2AP48426 406 aaPredicted RBP8.2□□□□□ -1.1
RBM39-237ENST00000492779 MRPL50Q8N5N7 158 aaKnown RBP8.2□□□□□ -1.1
RBM39-237ENST00000492779 MBIPQ9NS73 344 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 CHMP5Q9NZZ3 219 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 DDX19BQ9UMR2 479 aa8.2□□□□□ -1.1
RBM39-237ENST00000492779 ABCC6O95255 1503 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 ONECUT3O60422 494 aaPredicted RBP8.19□□□□□ -1.1
RBM39-237ENST00000492779 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
RBM39-237ENST00000492779 SLC4A2P04920 1241 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 PIGBQ92521 554 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 ASAP1Q9ULH1 1129 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 THRAP3Q9Y2W1 955 aaKnown RBP8.19□□□□□ -1.1
RBM39-237ENST00000492779 PCDH11XQ9BZA7 1347 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 PCDH11YQ9BZA8 1340 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 GOLGA6L3A6NEY3 463 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 FGD1P98174 961 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 SMIM5Q71RC9 77 aa8.19□□□□□ -1.1
RBM39-237ENST00000492779 RGS12O14924 1447 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 SHANK3Q9BYB0 1731 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 TRIM37O94972 964 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 PNNQ9H307 717 aaKnown RBP8.18□□□□□ -1.1
RBM39-237ENST00000492779 UPF2Q9HAU5 1272 aaKnown RBP8.18□□□□□ -1.1
RBM39-237ENST00000492779 BTBD11A6QL63 1104 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 SMARCA5O60264 1052 aaPredicted RBP8.18□□□□□ -1.1
RBM39-237ENST00000492779 IGSF3O75054 1194 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 CABP4P57796 275 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 TEFQ10587 303 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 KRT27Q7Z3Y8 459 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 ZNF428Q96B54 188 aa8.18□□□□□ -1.1
RBM39-237ENST00000492779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.12e-26■■■□□ 15.2
RBM39-237ENST00000492779 CEMIPQ8WUJ3 1361 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 AAMPQ13685 434 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 DCAF5Q96JK2 942 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 SLC52A2Q9HAB3 445 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 GRPEL1Q9HAV7 217 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 TSPYL4Q9UJ04 414 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 LRRC37A3O60309 1634 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 TNS2Q63HR2 1409 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 DTNBO60941 627 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
RBM39-237ENST00000492779 ANXA1P04083 346 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 ZNF853P0CG23 659 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 RAB3GAP1Q15042 981 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
RBM39-237ENST00000492779 NSFL1CQ9UNZ2 370 aaKnown RBP8.17□□□□□ -1.1
RBM39-237ENST00000492779 BRWD3Q6RI45 1802 aa8.16□□□□□ -1.1
RBM39-237ENST00000492779 APBB1O00213 710 aa8.16□□□□□ -1.1
RBM39-237ENST00000492779 CHL1O00533 1208 aa8.16□□□□□ -1.1
RBM39-237ENST00000492779 TAF7Q15545 349 aaPredicted RBP8.16□□□□□ -1.1
RBM39-237ENST00000492779 ILDR2Q71H61 639 aa8.16□□□□□ -1.1
RBM39-237ENST00000492779 PLEKHM2Q8IWE5 1019 aa8.16□□□□□ -1.1
RBM39-237ENST00000492779 ZNF496Q96IT1 587 aaPredicted RBP8.16□□□□□ -1.1
RBM39-237ENST00000492779 NKX1-1Q15270 411 aaPredicted RBP8.15□□□□□ -1.1
RBM39-237ENST00000492779 BMP2KLQ5H9B9 411 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 TSHZ3Q63HK5 1081 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 ZGPATQ8N5A5 531 aaKnown RBP8.15□□□□□ -1.1
RBM39-237ENST00000492779 SNX21Q969T3 373 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms