RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 HOXB7P09629 217 aa15.76■□□□□ 0.11
PRAME-213ENST00000492657 CABLES1Q8TDN4 633 aa15.76■□□□□ 0.11
PRAME-213ENST00000492657 CIZ1Q9ULV3 898 aaPredicted RBP15.76■□□□□ 0.11
PRAME-213ENST00000492657 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
PRAME-213ENST00000492657 MAP4K4O95819 1239 aaPredicted RBP15.76■□□□□ 0.11
PRAME-213ENST00000492657 LMO7Q8WWI1 1683 aa15.76■□□□□ 0.11
PRAME-213ENST00000492657 GOLGA6L3A6NEY3 463 aa15.76■□□□□ 0.11
PRAME-213ENST00000492657 SLC39A6Q13433 755 aa15.75■□□□□ 0.11
PRAME-213ENST00000492657 POLA2Q14181 598 aa15.75■□□□□ 0.11
PRAME-213ENST00000492657 ESYT1Q9BSJ8 1104 aa15.75■□□□□ 0.11
PRAME-213ENST00000492657 NLRP2Q9NX02 1062 aa15.75■□□□□ 0.11
PRAME-213ENST00000492657 PHRF1Q9P1Y6 1649 aaKnown RBP15.75■□□□□ 0.11
PRAME-213ENST00000492657 STAP2Q9UGK3 403 aa15.75■□□□□ 0.11
PRAME-213ENST00000492657 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
PRAME-213ENST00000492657 CHMLP26374 656 aa15.74■□□□□ 0.11
PRAME-213ENST00000492657 DBF4Q9UBU7 674 aaPredicted RBP15.74■□□□□ 0.11
PRAME-213ENST00000492657 TRPM3Q9HCF6 1732 aaPredicted RBP15.74■□□□□ 0.11
PRAME-213ENST00000492657 RHPN1Q8TCX5 695 aa15.74■□□□□ 0.11
PRAME-213ENST00000492657 ERBB3P21860 1342 aa15.73■□□□□ 0.11
PRAME-213ENST00000492657 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
PRAME-213ENST00000492657 IL25Q9H293 177 aa15.73■□□□□ 0.11
PRAME-213ENST00000492657 PALD1Q9ULE6 856 aa15.73■□□□□ 0.11
PRAME-213ENST00000492657 N4BP2Q86UW6 1770 aaPredicted RBP15.73■□□□□ 0.11
PRAME-213ENST00000492657 NCAPD2Q15021 1401 aa15.73■□□□□ 0.11
PRAME-213ENST00000492657 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
PRAME-213ENST00000492657 DDX11L8A8MPP1 907 aa15.72■□□□□ 0.11
PRAME-213ENST00000492657 ATF3P18847 181 aa15.72■□□□□ 0.11
PRAME-213ENST00000492657 PKP1Q13835 747 aa15.72■□□□□ 0.11
PRAME-213ENST00000492657 CHRNA2Q15822 529 aa15.72■□□□□ 0.11
PRAME-213ENST00000492657 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
PRAME-213ENST00000492657 ZGPATQ8N5A5 531 aaKnown RBP15.72■□□□□ 0.11
PRAME-213ENST00000492657 ANO2Q9NQ90 1003 aa15.72■□□□□ 0.11
PRAME-213ENST00000492657 TUBGCP6Q96RT7 1819 aa15.72■□□□□ 0.11
PRAME-213ENST00000492657 TMEM94Q12767 1356 aa15.71■□□□□ 0.11
PRAME-213ENST00000492657 GBP4Q96PP9 640 aa15.71■□□□□ 0.1
PRAME-213ENST00000492657 HEG1Q9ULI3 1381 aa15.7■□□□□ 0.1
PRAME-213ENST00000492657 RAB11FIP3O75154 756 aa15.7■□□□□ 0.1
PRAME-213ENST00000492657 KSR2Q6VAB6 950 aa15.7■□□□□ 0.1
PRAME-213ENST00000492657 RAPGEF4Q8WZA2 1011 aa15.7■□□□□ 0.1
PRAME-213ENST00000492657 C9orf78Q9NZ63 289 aaPredicted RBP15.7■□□□□ 0.1
PRAME-213ENST00000492657 PA2G4Q9UQ80 394 aaKnown RBP15.7■□□□□ 0.1
PRAME-213ENST00000492657 ST18O60284 1047 aa15.7■□□□□ 0.1
PRAME-213ENST00000492657 NEK4P51957 841 aa15.7■□□□□ 0.1
PRAME-213ENST00000492657 NFATC2IPQ8NCF5 419 aa15.7■□□□□ 0.1
PRAME-213ENST00000492657 PI4K2BQ8TCG2 481 aa15.69■□□□□ 0.1
PRAME-213ENST00000492657 FSD2A1L4K1 749 aa15.69■□□□□ 0.1
PRAME-213ENST00000492657 CSB-PGBD3P0DP91 1061 aa15.69■□□□□ 0.1
PRAME-213ENST00000492657 KIF1BPQ96EK5 621 aa15.69■□□□□ 0.1
PRAME-213ENST00000492657 ERBB4Q15303 1308 aa15.69■□□□□ 0.1
PRAME-213ENST00000492657 OS9Q13438 667 aaPredicted RBP15.68■□□□□ 0.1
PRAME-213ENST00000492657 PDIA6Q15084 440 aa15.68■□□□□ 0.1
PRAME-213ENST00000492657 NOL8Q76FK4 1167 aaKnown RBP15.68■□□□□ 0.1
PRAME-213ENST00000492657 CHMP4AQ9BY43 222 aa15.68■□□□□ 0.1
PRAME-213ENST00000492657 MST1RQ04912 1400 aa15.68■□□□□ 0.1
PRAME-213ENST00000492657 MYL6BP14649 208 aa15.68■□□□□ 0.1
PRAME-213ENST00000492657 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
PRAME-213ENST00000492657 HSP90AA2PQ14568 343 aaPredicted RBP15.68■□□□□ 0.1
PRAME-213ENST00000492657 HSPA2P54652 639 aa15.67■□□□□ 0.1
PRAME-213ENST00000492657 BAG4O95429 457 aaKnown RBP15.67■□□□□ 0.1
PRAME-213ENST00000492657 ZNF790Q6PG37 636 aa15.67■□□□□ 0.1
PRAME-213ENST00000492657 PHKG2P15735 406 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 TATP17735 454 aaPredicted RBP15.66■□□□□ 0.1
PRAME-213ENST00000492657 CHAMP1Q96JM3 812 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 DDX21Q9NR30 783 aaKnown RBP eCLIP15.66■□□□□ 0.1
PRAME-213ENST00000492657 HYPKQ9NX55 129 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 NPHP3Q7Z494 1330 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 KDM6AO15550 1401 aaPredicted RBP15.66■□□□□ 0.1
PRAME-213ENST00000492657 ALS2Q96Q42 1657 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 ALDH1L1O75891 902 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 KAZALD1Q96I82 304 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 SUCLG2Q96I99 432 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
PRAME-213ENST00000492657 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.66■□□□□ 0.1
PRAME-213ENST00000492657 AOX1Q06278 1338 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 STRCP1A6NGW2 1772 aa15.66■□□□□ 0.1
PRAME-213ENST00000492657 CAMTA1Q9Y6Y1 1673 aa15.65■□□□□ 0.1
PRAME-213ENST00000492657 KIF1AQ12756 1690 aa15.65■□□□□ 0.1
PRAME-213ENST00000492657 MEGF6O75095 1541 aa15.65■□□□□ 0.1
PRAME-213ENST00000492657 JARID2Q92833 1246 aaPredicted RBP15.65■□□□□ 0.1
PRAME-213ENST00000492657 ZNF496Q96IT1 587 aaPredicted RBP15.65■□□□□ 0.1
PRAME-213ENST00000492657 TMX3Q96JJ7 454 aa15.65■□□□□ 0.1
PRAME-213ENST00000492657 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
PRAME-213ENST00000492657 SIPA1L3O60292 1781 aaPredicted RBP15.65■□□□□ 0.1
PRAME-213ENST00000492657 OVOS2A0A0G2JMS6 1433 aa15.64■□□□□ 0.09
PRAME-213ENST00000492657 CYP2E1P05181 493 aaPredicted RBP15.64■□□□□ 0.09
PRAME-213ENST00000492657 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.09
PRAME-213ENST00000492657 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.09
PRAME-213ENST00000492657 CYP27B1O15528 508 aa15.64■□□□□ 0.09
PRAME-213ENST00000492657 IGKV5-2P06315 115 aa15.64■□□□□ 0.09
PRAME-213ENST00000492657 MTX1Q13505 466 aa15.64■□□□□ 0.09
PRAME-213ENST00000492657 RIC3Q7Z5B4 369 aa15.64■□□□□ 0.09
PRAME-213ENST00000492657 LINS1Q8NG48 757 aa15.64■□□□□ 0.09
PRAME-213ENST00000492657 USP16Q9Y5T5 823 aa15.64■□□□□ 0.09
PRAME-213ENST00000492657 GRM8O00222 908 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 MCCP23508 829 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 MCTP1Q6DN14 999 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 GAS2L3Q86XJ1 694 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 XAGE3Q8WTP9 111 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 BICC1Q9H694 974 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms