RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 PLEKHF1Q96S99 279 aa31.39■■■□□ 2.62
CTDSP1-211ENST00000492545 NARFQ9UHQ1 456 aa31.39■■■□□ 2.62
CTDSP1-211ENST00000492545 FKBP8Q14318 412 aa31.38■■■□□ 2.61
CTDSP1-211ENST00000492545 CHD4Q14839 1912 aa31.37■■■□□ 2.61
CTDSP1-211ENST00000492545 SIPA1L3O60292 1781 aaPredicted RBP31.36■■■□□ 2.61
CTDSP1-211ENST00000492545 COL15A1P39059 1388 aa31.36■■■□□ 2.61
CTDSP1-211ENST00000492545 A0A087WZG4 1122 aa31.36■■■□□ 2.61
CTDSP1-211ENST00000492545 MYBBP1AQ9BQG0 1328 aaKnown RBP31.35■■■□□ 2.61
CTDSP1-211ENST00000492545 CANXP27824 592 aaKnown RBP31.35■■■□□ 2.61
CTDSP1-211ENST00000492545 EIF5P55010 431 aaKnown RBP31.35■■■□□ 2.61
CTDSP1-211ENST00000492545 USPL1Q5W0Q7 1092 aa31.35■■■□□ 2.61
CTDSP1-211ENST00000492545 C4AP0C0L4 1744 aa31.35■■■□□ 2.61
CTDSP1-211ENST00000492545 TM4SF1P30408 202 aa31.34■■■□□ 2.61
CTDSP1-211ENST00000492545 TAF7Q15545 349 aaPredicted RBP31.34■■■□□ 2.61
CTDSP1-211ENST00000492545 MAPK8IP3Q9UPT6 1336 aa31.33■■■□□ 2.61
CTDSP1-211ENST00000492545 NFE2L2Q16236 605 aa31.33■■■□□ 2.61
CTDSP1-211ENST00000492545 C10orf71Q711Q0 1435 aa31.32■■■□□ 2.61
CTDSP1-211ENST00000492545 KCNQ3O43525 872 aa31.32■■■□□ 2.6
CTDSP1-211ENST00000492545 DCTN1Q14203 1278 aa31.32■■■□□ 2.6
CTDSP1-211ENST00000492545 IL6STP40189 918 aaPredicted RBP31.31■■■□□ 2.6
CTDSP1-211ENST00000492545 ZNF784Q8NCA9 323 aaPredicted RBP31.31■■■□□ 2.6
CTDSP1-211ENST00000492545 PNISRQ8TF01 805 aaKnown RBP31.31■■■□□ 2.6
CTDSP1-211ENST00000492545 SNRPA1P09661 255 aaKnown RBP31.3■■■□□ 2.6
CTDSP1-211ENST00000492545 NPM2Q86SE8 214 aaKnown RBP31.3■■■□□ 2.6
CTDSP1-211ENST00000492545 DDR1Q08345 913 aa31.29■■■□□ 2.6
CTDSP1-211ENST00000492545 POLRMTO00411 1230 aaKnown RBP31.28■■■□□ 2.6
CTDSP1-211ENST00000492545 PXDNLA1KZ92 1463 aa31.27■■■□□ 2.6
CTDSP1-211ENST00000492545 KIF13BQ9NQT8 1826 aa31.26■■■□□ 2.6
CTDSP1-211ENST00000492545 A0A0G2JLW4 131 aa31.25■■■□□ 2.59
CTDSP1-211ENST00000492545 NFIXQ14938 502 aa31.25■■■□□ 2.59
CTDSP1-211ENST00000492545 A1BGP04217 495 aa31.24■■■□□ 2.59
CTDSP1-211ENST00000492545 BCL2L12Q9HB09 334 aa31.24■■■□□ 2.59
CTDSP1-211ENST00000492545 USP16Q9Y5T5 823 aa31.24■■■□□ 2.59
CTDSP1-211ENST00000492545 DPEP1P16444 411 aa31.23■■■□□ 2.59
CTDSP1-211ENST00000492545 PRKRIP1Q9H875 184 aaPredicted RBP31.21■■■□□ 2.59
CTDSP1-211ENST00000492545 ZNF330Q9Y3S2 320 aaPredicted RBP31.2■■■□□ 2.59
CTDSP1-211ENST00000492545 LMOD3Q0VAK6 560 aa31.19■■■□□ 2.58
CTDSP1-211ENST00000492545 WWC3Q9ULE0 1092 aa31.19■■■□□ 2.58
CTDSP1-211ENST00000492545 TBC1D2BQ9UPU7 963 aa31.19■■■□□ 2.58
CTDSP1-211ENST00000492545 SERPINB2P05120 415 aa31.18■■■□□ 2.58
CTDSP1-211ENST00000492545 KCNA3P22001 575 aa31.18■■■□□ 2.58
CTDSP1-211ENST00000492545 RIPK4P57078 832 aa31.18■■■□□ 2.58
CTDSP1-211ENST00000492545 WDR43Q15061 677 aaKnown RBP eCLIP31.18■■■□□ 2.58
CTDSP1-211ENST00000492545 MIS18AQ9NYP9 233 aa31.18■■■□□ 2.58
CTDSP1-211ENST00000492545 PIM2Q9P1W9 311 aa31.18■■■□□ 2.58
CTDSP1-211ENST00000492545 BCS1LQ9Y276 419 aa31.18■■■□□ 2.58
CTDSP1-211ENST00000492545 PRAMEF22A3QJZ6 481 aa31.16■■■□□ 2.58
CTDSP1-211ENST00000492545 RGL2O15211 777 aa31.15■■■□□ 2.58
CTDSP1-211ENST00000492545 TMPOP42166 694 aaKnown RBP31.15■■■□□ 2.58
CTDSP1-211ENST00000492545 BABAM1Q9NWV8 329 aa31.15■■■□□ 2.58
CTDSP1-211ENST00000492545 DZIP3Q86Y13 1208 aaKnown RBP31.14■■■□□ 2.58
CTDSP1-211ENST00000492545 THUMPD2Q9BTF0 503 aaKnown RBP31.14■■■□□ 2.58
CTDSP1-211ENST00000492545 KIAA1551Q9HCM1 1747 aa31.13■■■□□ 2.57
CTDSP1-211ENST00000492545 GIGYF1O75420 1035 aaPredicted RBP31.13■■■□□ 2.57
CTDSP1-211ENST00000492545 CAMTA2O94983 1202 aa31.13■■■□□ 2.57
CTDSP1-211ENST00000492545 EIF4A1P60842 406 aaKnown RBP31.13■■■□□ 2.57
CTDSP1-211ENST00000492545 CLEC4GQ6UXB4 293 aa31.13■■■□□ 2.57
CTDSP1-211ENST00000492545 DLG5Q8TDM6 1919 aa31.13■■■□□ 2.57
CTDSP1-211ENST00000492545 DALRD3Q5D0E6 543 aaKnown RBP31.12■■■□□ 2.57
CTDSP1-211ENST00000492545 TBC1D9BQ66K14 1250 aa31.12■■■□□ 2.57
CTDSP1-211ENST00000492545 BICDL1Q6ZP65 573 aa31.12■■■□□ 2.57
CTDSP1-211ENST00000492545 RUNDC1Q96C34 613 aa31.12■■■□□ 2.57
CTDSP1-211ENST00000492545 N4BP2Q86UW6 1770 aaPredicted RBP31.11■■■□□ 2.57
CTDSP1-211ENST00000492545 SETDB2Q96T68 719 aa31.11■■■□□ 2.57
CTDSP1-211ENST00000492545 PDZRN3Q9UPQ7 1066 aa31.1■■■□□ 2.57
CTDSP1-211ENST00000492545 ZNF652Q9Y2D9 606 aa31.1■■■□□ 2.57
CTDSP1-211ENST00000492545 CARMIL3Q8ND23 1372 aa31.09■■■□□ 2.57
CTDSP1-211ENST00000492545 NBPF26B4DH59 902 aa31.09■■■□□ 2.57
CTDSP1-211ENST00000492545 NBPF10Q6P3W6 841 aaKnown RBP31.09■■■□□ 2.57
CTDSP1-211ENST00000492545 NBPF15Q8N660 670 aa31.09■■■□□ 2.57
CTDSP1-211ENST00000492545 ADAMTS8Q9UP79 889 aa31.09■■■□□ 2.57
CTDSP1-211ENST00000492545 CHRNA5P30532 468 aa31.08■■■□□ 2.57
CTDSP1-211ENST00000492545 TSPYL4Q9UJ04 414 aa31.08■■■□□ 2.57
CTDSP1-211ENST00000492545 PIP4K2AP48426 406 aaPredicted RBP31.07■■■□□ 2.56
CTDSP1-211ENST00000492545 ARHGAP27Q6ZUM4 889 aa31.07■■■□□ 2.56
CTDSP1-211ENST00000492545 NRXN2Q9P2S2 1712 aa31.07■■■□□ 2.56
CTDSP1-211ENST00000492545 CCDC146Q8IYE0 955 aa31.06■■■□□ 2.56
CTDSP1-211ENST00000492545 BRIP1Q9BX63 1249 aa31.06■■■□□ 2.56
CTDSP1-211ENST00000492545 ADCY9O60503 1353 aa31.05■■■□□ 2.56
CTDSP1-211ENST00000492545 SCN7AQ01118 1682 aa31.04■■■□□ 2.56
CTDSP1-211ENST00000492545 H0YIN7 160 aa31.04■■■□□ 2.56
CTDSP1-211ENST00000492545 KDM3BQ7LBC6 1761 aa31.03■■■□□ 2.56
CTDSP1-211ENST00000492545 PDE6BP35913 854 aa31.03■■■□□ 2.56
CTDSP1-211ENST00000492545 AFDNP55196 1824 aaKnown RBP31.03■■■□□ 2.56
CTDSP1-211ENST00000492545 ERBB4Q15303 1308 aa31.02■■■□□ 2.56
CTDSP1-211ENST00000492545 BRCA1P38398 1863 aaKnown RBP31.02■■■□□ 2.56
CTDSP1-211ENST00000492545 ATP10DQ9P241 1426 aa31.02■■■□□ 2.56
CTDSP1-211ENST00000492545 PRR5LQ6MZQ0 368 aa31.02■■■□□ 2.56
CTDSP1-211ENST00000492545 NEUROD2Q15784 382 aa31.01■■■□□ 2.55
CTDSP1-211ENST00000492545 C2CD5Q86YS7 1000 aa31.01■■■□□ 2.55
CTDSP1-211ENST00000492545 CNBD1Q8NA66 436 aa31.01■■■□□ 2.55
CTDSP1-211ENST00000492545 RRP7AQ9Y3A4 280 aaKnown RBP31.01■■■□□ 2.55
CTDSP1-211ENST00000492545 NPHP1O15259 732 aa31■■■□□ 2.55
CTDSP1-211ENST00000492545 TTLL6Q8N841 843 aa31■■■□□ 2.55
CTDSP1-211ENST00000492545 ST5P78524 1137 aa30.99■■■□□ 2.55
CTDSP1-211ENST00000492545 ZNF316A6NFI3 1004 aaPredicted RBP30.98■■■□□ 2.55
CTDSP1-211ENST00000492545 ERVV-1B6SEH8 477 aa30.98■■■□□ 2.55
CTDSP1-211ENST00000492545 GPBP1L1Q9HC44 474 aaPredicted RBP30.98■■■□□ 2.55
CTDSP1-211ENST00000492545 TRIM35Q9UPQ4 493 aa30.98■■■□□ 2.55
CTDSP1-211ENST00000492545 NBPF5PQ86XG9 351 aaPredicted RBP30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms