RNA–Protein interactions for RNA: ENST00000492495.1

PPARGC1B-207, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 2

Gene PPARGC1B, Length 572 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-207ENST00000492495 SKOR1P84550 965 aa12.2□□□□□ -0.46
PPARGC1B-207ENST00000492495 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
PPARGC1B-207ENST00000492495 NCOA4Q13772 614 aa12.2□□□□□ -0.46
PPARGC1B-207ENST00000492495 TRAF7Q6Q0C0 670 aa12.2□□□□□ -0.46
PPARGC1B-207ENST00000492495 ESF1Q9H501 851 aaKnown RBP12.2□□□□□ -0.46
PPARGC1B-207ENST00000492495 NBPF20Q3BBV1 942 aa12.19□□□□□ -0.46
PPARGC1B-207ENST00000492495 TSGA10IPQ3SY00 556 aa12.19□□□□□ -0.46
PPARGC1B-207ENST00000492495 RNF20Q5VTR2 975 aa12.19□□□□□ -0.46
PPARGC1B-207ENST00000492495 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
PPARGC1B-207ENST00000492495 LMTK2Q8IWU2 1503 aa12.19□□□□□ -0.46
PPARGC1B-207ENST00000492495 STRCQ7RTU9 1775 aa12.18□□□□□ -0.46
PPARGC1B-207ENST00000492495 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
PPARGC1B-207ENST00000492495 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
PPARGC1B-207ENST00000492495 CLTCQ00610 1675 aaKnown RBP12.18□□□□□ -0.46
PPARGC1B-207ENST00000492495 PTPRTO14522 1441 aa12.18□□□□□ -0.46
PPARGC1B-207ENST00000492495 ANKRD50Q9ULJ7 1429 aa12.18□□□□□ -0.46
PPARGC1B-207ENST00000492495 EIF2AK4Q9P2K8 1649 aaKnown RBP12.18□□□□□ -0.46
PPARGC1B-207ENST00000492495 TNRQ92752 1358 aa12.18□□□□□ -0.46
PPARGC1B-207ENST00000492495 PRDM15P57071 1507 aaPredicted RBP12.17□□□□□ -0.46
PPARGC1B-207ENST00000492495 CROCC2H7BZ55 1655 aa12.17□□□□□ -0.46
PPARGC1B-207ENST00000492495 ESPNB1AK53 854 aa12.17□□□□□ -0.46
PPARGC1B-207ENST00000492495 ELOAQ14241 798 aaKnown RBP12.17□□□□□ -0.46
PPARGC1B-207ENST00000492495 CCDC85AQ96PX6 553 aaPredicted RBP12.17□□□□□ -0.46
PPARGC1B-207ENST00000492495 PREX1Q8TCU6 1659 aa12.16□□□□□ -0.46
PPARGC1B-207ENST00000492495 A2ML1A8K2U0 1454 aa12.16□□□□□ -0.46
PPARGC1B-207ENST00000492495 ATP5J2-PTCD1G3V325 749 aa12.16□□□□□ -0.46
PPARGC1B-207ENST00000492495 EML3Q32P44 896 aa12.16□□□□□ -0.46
PPARGC1B-207ENST00000492495 CCDC125Q86Z20 511 aa12.16□□□□□ -0.46
PPARGC1B-207ENST00000492495 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
PPARGC1B-207ENST00000492495 KCTD17Q8N5Z5 321 aa12.16□□□□□ -0.46
PPARGC1B-207ENST00000492495 SPATA31D1Q6ZQQ2 1576 aa12.16□□□□□ -0.46
PPARGC1B-207ENST00000492495 DEPDC5O75140 1603 aa12.15□□□□□ -0.46
PPARGC1B-207ENST00000492495 PLA2R1Q13018 1463 aa12.15□□□□□ -0.46
PPARGC1B-207ENST00000492495 NOS1P29475 1434 aa12.15□□□□□ -0.46
PPARGC1B-207ENST00000492495 DOLKQ9UPQ8 538 aa12.15□□□□□ -0.46
PPARGC1B-207ENST00000492495 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
PPARGC1B-207ENST00000492495 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
PPARGC1B-207ENST00000492495 LIAT1Q6ZQX7 453 aa12.14□□□□□ -0.47
PPARGC1B-207ENST00000492495 MAP4K5Q9Y4K4 846 aa12.14□□□□□ -0.47
PPARGC1B-207ENST00000492495 IDI1Q13907 227 aa12.13□□□□□ -0.47
PPARGC1B-207ENST00000492495 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
PPARGC1B-207ENST00000492495 KCTD15Q96SI1 283 aaPredicted RBP12.13□□□□□ -0.47
PPARGC1B-207ENST00000492495 TMEM88BA6NKF7 163 aa12.12□□□□□ -0.47
PPARGC1B-207ENST00000492495 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
PPARGC1B-207ENST00000492495 EHBP1Q8NDI1 1231 aa12.12□□□□□ -0.47
PPARGC1B-207ENST00000492495 EMID1Q96A84 441 aaPredicted RBP12.12□□□□□ -0.47
PPARGC1B-207ENST00000492495 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
PPARGC1B-207ENST00000492495 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
PPARGC1B-207ENST00000492495 NAIPQ13075 1403 aa12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 CEP170BQ9Y4F5 1589 aaPredicted RBP12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 RASA1P20936 1047 aa12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 PTK7Q13308 1070 aa12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 CRTC2Q53ET0 693 aaPredicted RBP12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 TRIM50Q86XT4 487 aa12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 NOVA2Q9UNW9 492 aaKnown RBP12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 CAMSAP1Q5T5Y3 1602 aa12.11□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L15C9J2P7 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L10C9JJH3 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L13C9JLJ4 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L12C9JPN9 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L11C9JVI0 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L21D6R901 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L18D6R9N7 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L22D6RA61 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L17D6RBQ6 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L19D6RCP7 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L20D6RJB6 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 LTKP29376 864 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 USP17L24Q0WX57 530 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 OXLD1Q5BKU9 147 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 VASH1Q7L8A9 365 aaPredicted RBP12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 THEMISQ8N1K5 641 aaPredicted RBP12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 ZMIZ1Q9ULJ6 1067 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 LTBP4Q8N2S1 1624 aa12.1□□□□□ -0.47
PPARGC1B-207ENST00000492495 MED14O60244 1454 aa12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 ARHGAP23Q9P227 1491 aa12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 AEBP1Q8IUX7 1158 aa12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 OGFOD1Q8N543 542 aa12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 MPNDQ8N594 471 aa12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 CDK15Q96Q40 435 aa12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 ZNF142P52746 1687 aaPredicted RBP12.09□□□□□ -0.47
PPARGC1B-207ENST00000492495 MYO3AQ8NEV4 1616 aa12.08□□□□□ -0.48
PPARGC1B-207ENST00000492495 SLC19A1P41440 591 aa12.08□□□□□ -0.48
PPARGC1B-207ENST00000492495 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
PPARGC1B-207ENST00000492495 USP4Q13107 963 aa12.08□□□□□ -0.48
PPARGC1B-207ENST00000492495 SIRT1Q96EB6 747 aa12.08□□□□□ -0.48
PPARGC1B-207ENST00000492495 PODXL2Q9NZ53 605 aa12.08□□□□□ -0.48
PPARGC1B-207ENST00000492495 PCDHB11Q9Y5F2 797 aa12.08□□□□□ -0.48
PPARGC1B-207ENST00000492495 SIAH2O43255 324 aa12.07□□□□□ -0.48
PPARGC1B-207ENST00000492495 CLDN10P78369 228 aa12.07□□□□□ -0.48
PPARGC1B-207ENST00000492495 INTS6LQ5JSJ4 861 aaKnown RBP12.07□□□□□ -0.48
PPARGC1B-207ENST00000492495 TMEM164Q5U3C3 297 aa12.07□□□□□ -0.48
PPARGC1B-207ENST00000492495 STK32AQ8WU08 396 aa12.07□□□□□ -0.48
PPARGC1B-207ENST00000492495 ZC3H13Q5T200 1668 aaKnown RBP12.06□□□□□ -0.48
PPARGC1B-207ENST00000492495 NEURL4Q96JN8 1562 aa12.06□□□□□ -0.48
PPARGC1B-207ENST00000492495 BRD1O95696 1058 aa12.06□□□□□ -0.48
PPARGC1B-207ENST00000492495 ITGAEP38570 1179 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms