RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 ZBTB1Q9Y2K1 713 aa15.71■□□□□ 0.11
MDC1-207ENST00000492462 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.1
MDC1-207ENST00000492462 TTC5Q8N0Z6 440 aa15.7■□□□□ 0.1
MDC1-207ENST00000492462 CD2APQ9Y5K6 639 aa15.7■□□□□ 0.1
MDC1-207ENST00000492462 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
MDC1-207ENST00000492462 VSIG10Q8N0Z9 540 aa15.69■□□□□ 0.1
MDC1-207ENST00000492462 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
MDC1-207ENST00000492462 HEG1Q9ULI3 1381 aa15.69■□□□□ 0.1
MDC1-207ENST00000492462 USP42Q9H9J4 1324 aaKnown RBP15.68■□□□□ 0.1
MDC1-207ENST00000492462 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
MDC1-207ENST00000492462 APLP1P51693 650 aa15.68■□□□□ 0.1
MDC1-207ENST00000492462 FKBP8Q14318 412 aa15.68■□□□□ 0.1
MDC1-207ENST00000492462 NLGN1Q8N2Q7 840 aa15.68■□□□□ 0.1
MDC1-207ENST00000492462 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
MDC1-207ENST00000492462 CANXP27824 592 aaKnown RBP15.67■□□□□ 0.1
MDC1-207ENST00000492462 RTF1Q92541 710 aaKnown RBP15.67■□□□□ 0.1
MDC1-207ENST00000492462 KIAA1551Q9HCM1 1747 aa15.67■□□□□ 0.1
MDC1-207ENST00000492462 KIF13BQ9NQT8 1826 aa15.66■□□□□ 0.1
MDC1-207ENST00000492462 MYBBP1AQ9BQG0 1328 aaKnown RBP15.66■□□□□ 0.1
MDC1-207ENST00000492462 PCNTO95613 3336 aa15.65■□□□□ 0.1
MDC1-207ENST00000492462 COL15A1P39059 1388 aa15.65■□□□□ 0.1
MDC1-207ENST00000492462 N4BP2Q86UW6 1770 aaPredicted RBP15.65■□□□□ 0.1
MDC1-207ENST00000492462 PRAMEF22A3QJZ6 481 aa15.65■□□□□ 0.1
MDC1-207ENST00000492462 HTATSF1O43719 755 aaKnown RBP15.65■□□□□ 0.1
MDC1-207ENST00000492462 DDR1Q08345 913 aa15.65■□□□□ 0.1
MDC1-207ENST00000492462 USPL1Q5W0Q7 1092 aa15.65■□□□□ 0.1
MDC1-207ENST00000492462 ZNF526Q8TF50 670 aaPredicted RBP15.65■□□□□ 0.1
MDC1-207ENST00000492462 FMNL2Q96PY5 1086 aa15.65■□□□□ 0.1
MDC1-207ENST00000492462 THUMPD2Q9BTF0 503 aaKnown RBP15.65■□□□□ 0.1
MDC1-207ENST00000492462 MIS18AQ9NYP9 233 aa15.65■□□□□ 0.1
MDC1-207ENST00000492462 GRIN3BO60391 1043 aa15.64■□□□□ 0.09
MDC1-207ENST00000492462 NFE2L2Q16236 605 aa15.64■□□□□ 0.09
MDC1-207ENST00000492462 C10orf71Q711Q0 1435 aa15.64■□□□□ 0.09
MDC1-207ENST00000492462 BCL2L12Q9HB09 334 aa15.64■□□□□ 0.09
MDC1-207ENST00000492462 STARD3NLO95772 234 aa15.63■□□□□ 0.09
MDC1-207ENST00000492462 A1BGP04217 495 aa15.63■□□□□ 0.09
MDC1-207ENST00000492462 ZEB1P37275 1124 aaPredicted RBP15.63■□□□□ 0.09
MDC1-207ENST00000492462 EIF5P55010 431 aaKnown RBP15.63■□□□□ 0.09
MDC1-207ENST00000492462 NARFQ9UHQ1 456 aa15.63■□□□□ 0.09
MDC1-207ENST00000492462 USP16Q9Y5T5 823 aa15.63■□□□□ 0.09
MDC1-207ENST00000492462 PARP3Q9Y6F1 533 aa15.63■□□□□ 0.09
MDC1-207ENST00000492462 PXDNLA1KZ92 1463 aa15.63■□□□□ 0.09
MDC1-207ENST00000492462 ZPR1O75312 459 aa15.62■□□□□ 0.09
MDC1-207ENST00000492462 NEFMP07197 916 aa15.62■□□□□ 0.09
MDC1-207ENST00000492462 PIP4K2AP48426 406 aaPredicted RBP15.62■□□□□ 0.09
MDC1-207ENST00000492462 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
MDC1-207ENST00000492462 MAPK8IP3Q9UPT6 1336 aa15.62■□□□□ 0.09
MDC1-207ENST00000492462 AFDNP55196 1824 aaKnown RBP15.61■□□□□ 0.09
MDC1-207ENST00000492462 TM4SF1P30408 202 aa15.61■□□□□ 0.09
MDC1-207ENST00000492462 TAF7Q15545 349 aaPredicted RBP15.61■□□□□ 0.09
MDC1-207ENST00000492462 ZNF330Q9Y3S2 320 aaPredicted RBP15.61■□□□□ 0.09
MDC1-207ENST00000492462 KDM3BQ7LBC6 1761 aa15.61■□□□□ 0.09
MDC1-207ENST00000492462 A0A0G2JLW4 131 aa15.6■□□□□ 0.09
MDC1-207ENST00000492462 POLRMTO00411 1230 aaKnown RBP15.6■□□□□ 0.09
MDC1-207ENST00000492462 NFIXQ14938 502 aa15.6■□□□□ 0.09
MDC1-207ENST00000492462 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
MDC1-207ENST00000492462 TEX13AQ9BXU3 409 aaPredicted RBP15.6■□□□□ 0.09
MDC1-207ENST00000492462 DPEP1P16444 411 aa15.59■□□□□ 0.09
MDC1-207ENST00000492462 TBC1D2BQ9UPU7 963 aa15.59■□□□□ 0.09
MDC1-207ENST00000492462 RRP7AQ9Y3A4 280 aaKnown RBP15.59■□□□□ 0.09
MDC1-207ENST00000492462 ADCY9O60503 1353 aa15.59■□□□□ 0.09
MDC1-207ENST00000492462 SCN7AQ01118 1682 aa15.58■□□□□ 0.08
MDC1-207ENST00000492462 SNRPA1P09661 255 aaKnown RBP15.58■□□□□ 0.08
MDC1-207ENST00000492462 IL6STP40189 918 aaPredicted RBP15.58■□□□□ 0.08
MDC1-207ENST00000492462 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.08
MDC1-207ENST00000492462 BRCA1P38398 1863 aaKnown RBP15.58■□□□□ 0.08
MDC1-207ENST00000492462 KIF3CO14782 793 aa15.57■□□□□ 0.08
MDC1-207ENST00000492462 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
MDC1-207ENST00000492462 RIPK4P57078 832 aa15.57■□□□□ 0.08
MDC1-207ENST00000492462 TGFB2P61812 414 aa15.57■□□□□ 0.08
MDC1-207ENST00000492462 ADAMTS8Q9UP79 889 aa15.57■□□□□ 0.08
MDC1-207ENST00000492462 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
MDC1-207ENST00000492462 A0A087WZG4 1122 aa15.56■□□□□ 0.08
MDC1-207ENST00000492462 NBPF26B4DH59 902 aa15.56■□□□□ 0.08
MDC1-207ENST00000492462 KCNA3P22001 575 aa15.56■□□□□ 0.08
MDC1-207ENST00000492462 NBPF10Q6P3W6 841 aaKnown RBP15.56■□□□□ 0.08
MDC1-207ENST00000492462 BICDL1Q6ZP65 573 aa15.56■□□□□ 0.08
MDC1-207ENST00000492462 NBPF15Q8N660 670 aa15.56■□□□□ 0.08
MDC1-207ENST00000492462 JMYQ8N9B5 988 aa15.56■□□□□ 0.08
MDC1-207ENST00000492462 LAMB4A4D0S4 1761 aa15.56■□□□□ 0.08
MDC1-207ENST00000492462 BCORQ6W2J9 1755 aa15.55■□□□□ 0.08
MDC1-207ENST00000492462 CHRNA5P30532 468 aa15.55■□□□□ 0.08
MDC1-207ENST00000492462 EIF4A1P60842 406 aaKnown RBP15.55■□□□□ 0.08
MDC1-207ENST00000492462 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
MDC1-207ENST00000492462 CARMIL3Q8ND23 1372 aa15.54■□□□□ 0.08
MDC1-207ENST00000492462 CAMTA2O94983 1202 aa15.54■□□□□ 0.08
MDC1-207ENST00000492462 SERPINB2P05120 415 aa15.54■□□□□ 0.08
MDC1-207ENST00000492462 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
MDC1-207ENST00000492462 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
MDC1-207ENST00000492462 PNISRQ8TF01 805 aaKnown RBP15.54■□□□□ 0.08
MDC1-207ENST00000492462 KLRG1Q96E93 195 aa15.54■□□□□ 0.08
MDC1-207ENST00000492462 BCS1LQ9Y276 419 aa15.54■□□□□ 0.08
MDC1-207ENST00000492462 CCDC184Q52MB2 194 aa15.53■□□□□ 0.08
MDC1-207ENST00000492462 DZIP3Q86Y13 1208 aaKnown RBP15.53■□□□□ 0.08
MDC1-207ENST00000492462 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
MDC1-207ENST00000492462 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
MDC1-207ENST00000492462 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
MDC1-207ENST00000492462 ANKRD31Q8N7Z5 1873 aa15.52■□□□□ 0.07
MDC1-207ENST00000492462 WDR90Q96KV7 1748 aa15.51■□□□□ 0.07
MDC1-207ENST00000492462 TSPYL4Q9UJ04 414 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms