RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.64
COPS7B-222ENST00000492423 ACSBG1Q96GR2 724 aa19.08■□□□□ 0.64
COPS7B-222ENST00000492423 FMNL2Q96PY5 1086 aa19.08■□□□□ 0.64
COPS7B-222ENST00000492423 NOB1Q9ULX3 412 aaKnown RBP19.08■□□□□ 0.64
COPS7B-222ENST00000492423 RGS12O14924 1447 aa19.08■□□□□ 0.64
COPS7B-222ENST00000492423 RBM6P78332 1123 aaKnown RBP19.07■□□□□ 0.64
COPS7B-222ENST00000492423 HDGFL1Q5TGJ6 251 aa19.07■□□□□ 0.64
COPS7B-222ENST00000492423 CCDC30Q5VVM6 783 aa19.07■□□□□ 0.64
COPS7B-222ENST00000492423 ZKSCAN2Q63HK3 967 aa19.07■□□□□ 0.64
COPS7B-222ENST00000492423 ATG3Q9NT62 314 aa19.07■□□□□ 0.64
COPS7B-222ENST00000492423 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
COPS7B-222ENST00000492423 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
COPS7B-222ENST00000492423 ASAP1Q9ULH1 1129 aa19.06■□□□□ 0.64
COPS7B-222ENST00000492423 LY75O60449 1722 aa19.05■□□□□ 0.64
COPS7B-222ENST00000492423 COL5A3P25940 1745 aaPredicted RBP19.05■□□□□ 0.64
COPS7B-222ENST00000492423 TRIM27P14373 513 aa19.05■□□□□ 0.64
COPS7B-222ENST00000492423 RXRBP28702 533 aa19.05■□□□□ 0.64
COPS7B-222ENST00000492423 PDE3AQ14432 1141 aa19.05■□□□□ 0.64
COPS7B-222ENST00000492423 CRBNQ96SW2 442 aa19.05■□□□□ 0.64
COPS7B-222ENST00000492423 RREB1Q92766 1687 aa19.05■□□□□ 0.64
COPS7B-222ENST00000492423 SNRPA1P09661 255 aaKnown RBP19.04■□□□□ 0.64
COPS7B-222ENST00000492423 RLBP1P12271 317 aa19.04■□□□□ 0.64
COPS7B-222ENST00000492423 EIF2S2P20042 333 aaKnown RBP19.04■□□□□ 0.64
COPS7B-222ENST00000492423 ATF7IPQ6VMQ6 1270 aa19.04■□□□□ 0.64
COPS7B-222ENST00000492423 SYTL4Q96C24 671 aaPredicted RBP19.04■□□□□ 0.64
COPS7B-222ENST00000492423 KCNQ2O43526 872 aa19.03■□□□□ 0.64
COPS7B-222ENST00000492423 FAM182BQ5T319 152 aa19.03■□□□□ 0.64
COPS7B-222ENST00000492423 ERICH6BQ5W0A0 696 aa19.03■□□□□ 0.64
COPS7B-222ENST00000492423 G2E3Q7L622 706 aa19.03■□□□□ 0.64
COPS7B-222ENST00000492423 EXOC6Q8TAG9 804 aa19.03■□□□□ 0.64
COPS7B-222ENST00000492423 PANK1Q8TE04 598 aa19.03■□□□□ 0.64
COPS7B-222ENST00000492423 ARHGAP45Q92619 1136 aa19.03■□□□□ 0.64
COPS7B-222ENST00000492423 STK31Q9BXU1 1019 aa19.03■□□□□ 0.64
COPS7B-222ENST00000492423 IPO8O15397 1037 aaKnown RBP19.02■□□□□ 0.64
COPS7B-222ENST00000492423 CHPF2Q9P2E5 772 aa19.02■□□□□ 0.64
COPS7B-222ENST00000492423 USP16Q9Y5T5 823 aa19.02■□□□□ 0.64
COPS7B-222ENST00000492423 PTCD1O75127 700 aaKnown RBP19.01■□□□□ 0.63
COPS7B-222ENST00000492423 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
COPS7B-222ENST00000492423 ABCC4O15439 1325 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 PTPRCP08575 1304 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 NUP188Q5SRE5 1749 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 TAF1LQ8IZX4 1826 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 PDIA6Q15084 440 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 CLUAP1Q96AJ1 413 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 SLC4A9Q96Q91 983 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 CHMP4AQ9BY43 222 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 ARFGEF2Q9Y6D5 1785 aa19■□□□□ 0.63
COPS7B-222ENST00000492423 PALLDQ8WX93 1383 aa18.99■□□□□ 0.63
COPS7B-222ENST00000492423 ANXA1P04083 346 aa18.99■□□□□ 0.63
COPS7B-222ENST00000492423 MS4A1P11836 297 aa18.99■□□□□ 0.63
COPS7B-222ENST00000492423 PROSER3Q2NL68 480 aa18.99■□□□□ 0.63
COPS7B-222ENST00000492423 PTF1AQ7RTS3 328 aa18.99■□□□□ 0.63
COPS7B-222ENST00000492423 KRT27Q7Z3Y8 459 aa18.99■□□□□ 0.63
COPS7B-222ENST00000492423 VSIG10Q8N0Z9 540 aa18.99■□□□□ 0.63
COPS7B-222ENST00000492423 API5Q9BZZ5 524 aaKnown RBP18.99■□□□□ 0.63
COPS7B-222ENST00000492423 PXDNLA1KZ92 1463 aa18.98■□□□□ 0.63
COPS7B-222ENST00000492423 FLIIQ13045 1269 aa18.98■□□□□ 0.63
COPS7B-222ENST00000492423 PHAXQ9H814 394 aaKnown RBP18.98■□□□□ 0.63
COPS7B-222ENST00000492423 DBF4Q9UBU7 674 aaPredicted RBP18.98■□□□□ 0.63
COPS7B-222ENST00000492423 COG6Q9Y2V7 657 aa18.98■□□□□ 0.63
COPS7B-222ENST00000492423 MYH14Q7Z406 1995 aaKnown RBP18.97■□□□□ 0.63
COPS7B-222ENST00000492423 DNAJC10Q8IXB1 793 aa18.97■□□□□ 0.63
COPS7B-222ENST00000492423 FTSJ3Q8IY81 847 aaKnown RBP18.97■□□□□ 0.63
COPS7B-222ENST00000492423 TMEM57Q8N5G2 664 aa18.97■□□□□ 0.63
COPS7B-222ENST00000492423 UPF1Q92900 1129 aaKnown RBP eCLIP18.97■□□□□ 0.63
COPS7B-222ENST00000492423 DDX21Q9NR30 783 aaKnown RBP eCLIP18.97■□□□□ 0.63
COPS7B-222ENST00000492423 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
COPS7B-222ENST00000492423 TNS1Q9HBL0 1735 aaKnown RBP18.97■□□□□ 0.63
COPS7B-222ENST00000492423 MVPQ14764 893 aaKnown RBP18.96■□□□□ 0.63
COPS7B-222ENST00000492423 LRP10Q7Z4F1 713 aa18.96■□□□□ 0.63
COPS7B-222ENST00000492423 SMARCC1Q92922 1105 aaPredicted RBP18.95■□□□□ 0.62
COPS7B-222ENST00000492423 NBPF26B4DH59 902 aa18.94■□□□□ 0.62
COPS7B-222ENST00000492423 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
COPS7B-222ENST00000492423 NBPF10Q6P3W6 841 aaKnown RBP18.94■□□□□ 0.62
COPS7B-222ENST00000492423 NBPF15Q8N660 670 aa18.94■□□□□ 0.62
COPS7B-222ENST00000492423 HYPKQ9NX55 129 aa18.94■□□□□ 0.62
COPS7B-222ENST00000492423 AFDNP55196 1824 aaKnown RBP18.94■□□□□ 0.62
COPS7B-222ENST00000492423 PIP4K2AP48426 406 aaPredicted RBP18.93■□□□□ 0.62
COPS7B-222ENST00000492423 FKBP5Q13451 457 aaPredicted RBP18.93■□□□□ 0.62
COPS7B-222ENST00000492423 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
COPS7B-222ENST00000492423 TEX13AQ9BXU3 409 aaPredicted RBP18.93■□□□□ 0.62
COPS7B-222ENST00000492423 PPP4R2Q9NY27 417 aa18.93■□□□□ 0.62
COPS7B-222ENST00000492423 ADCY9O60503 1353 aa18.93■□□□□ 0.62
COPS7B-222ENST00000492423 LOC102724428A0A0B4J2F2 783 aa18.92■□□□□ 0.62
COPS7B-222ENST00000492423 F6X3S4 739 aa18.92■□□□□ 0.62
COPS7B-222ENST00000492423 SIK1P57059 783 aa18.92■□□□□ 0.62
COPS7B-222ENST00000492423 CHRDL2Q6WN34 429 aa18.92■□□□□ 0.62
COPS7B-222ENST00000492423 A1BGP04217 495 aa18.91■□□□□ 0.62
COPS7B-222ENST00000492423 CYP19A1P11511 503 aaPredicted RBP18.91■□□□□ 0.62
COPS7B-222ENST00000492423 INTS3Q68E01 1043 aaKnown RBP18.91■□□□□ 0.62
COPS7B-222ENST00000492423 ITPRIPQ8IWB1 547 aa18.91■□□□□ 0.62
COPS7B-222ENST00000492423 ANKRD36CQ5JPF3 1778 aa18.91■□□□□ 0.62
COPS7B-222ENST00000492423 MYL6BP14649 208 aa18.9■□□□□ 0.62
COPS7B-222ENST00000492423 ITPK1Q13572 414 aa18.9■□□□□ 0.62
COPS7B-222ENST00000492423 BCL11BQ9C0K0 894 aaPredicted RBP18.9■□□□□ 0.62
COPS7B-222ENST00000492423 RGPD3A6NKT7 1758 aaPredicted RBP18.89■□□□□ 0.61
COPS7B-222ENST00000492423 BCORQ6W2J9 1755 aa18.89■□□□□ 0.61
COPS7B-222ENST00000492423 RGPD4Q7Z3J3 1758 aa18.89■□□□□ 0.61
COPS7B-222ENST00000492423 XAGE3Q8WTP9 111 aa18.89■□□□□ 0.61
COPS7B-222ENST00000492423 DDX19BQ9UMR2 479 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms