RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 MYBBP1AQ9BQG0 1328 aaKnown RBP35.96■■■■□ 3.35
SH3GL3-204ENST00000492099 YBX3P16989 372 aaKnown RBP eCLIP35.95■■■■□ 3.35
SH3GL3-204ENST00000492099 DCTN1Q14203 1278 aa35.94■■■■□ 3.34
SH3GL3-204ENST00000492099 FKBP8Q14318 412 aa35.94■■■■□ 3.34
SH3GL3-204ENST00000492099 COL15A1P39059 1388 aa35.93■■■■□ 3.34
SH3GL3-204ENST00000492099 KCNQ3O43525 872 aa35.92■■■■□ 3.34
SH3GL3-204ENST00000492099 CANXP27824 592 aaKnown RBP35.92■■■■□ 3.34
SH3GL3-204ENST00000492099 MAPK8IP3Q9UPT6 1336 aa35.91■■■■□ 3.34
SH3GL3-204ENST00000492099 USPL1Q5W0Q7 1092 aa35.91■■■■□ 3.34
SH3GL3-204ENST00000492099 NARFQ9UHQ1 456 aa35.91■■■■□ 3.34
SH3GL3-204ENST00000492099 TGFB2P61812 414 aa35.9■■■■□ 3.34
SH3GL3-204ENST00000492099 NFE2L2Q16236 605 aa35.9■■■■□ 3.34
SH3GL3-204ENST00000492099 CHD4Q14839 1912 aa35.9■■■■□ 3.34
SH3GL3-204ENST00000492099 TAF7Q15545 349 aaPredicted RBP35.89■■■■□ 3.34
SH3GL3-204ENST00000492099 GOLGB1Q14789 3259 aaKnown RBP35.89■■■■□ 3.34
SH3GL3-204ENST00000492099 EIF5P55010 431 aaKnown RBP35.88■■■■□ 3.33
SH3GL3-204ENST00000492099 A0A087WZG4 1122 aa35.87■■■■□ 3.33
SH3GL3-204ENST00000492099 C10orf71Q711Q0 1435 aa35.87■■■■□ 3.33
SH3GL3-204ENST00000492099 TM4SF1P30408 202 aa35.86■■■■□ 3.33
SH3GL3-204ENST00000492099 DDR1Q08345 913 aa35.84■■■■□ 3.33
SH3GL3-204ENST00000492099 KIF13BQ9NQT8 1826 aa35.84■■■■□ 3.33
SH3GL3-204ENST00000492099 SNRPA1P09661 255 aaKnown RBP35.83■■■■□ 3.33
SH3GL3-204ENST00000492099 IL6STP40189 918 aaPredicted RBP35.83■■■■□ 3.33
SH3GL3-204ENST00000492099 PNISRQ8TF01 805 aaKnown RBP35.82■■■■□ 3.32
SH3GL3-204ENST00000492099 PXDNLA1KZ92 1463 aa35.81■■■■□ 3.32
SH3GL3-204ENST00000492099 POLRMTO00411 1230 aaKnown RBP35.81■■■■□ 3.32
SH3GL3-204ENST00000492099 A1BGP04217 495 aa35.81■■■■□ 3.32
SH3GL3-204ENST00000492099 NPM2Q86SE8 214 aaKnown RBP35.81■■■■□ 3.32
SH3GL3-204ENST00000492099 PRKRIP1Q9H875 184 aaPredicted RBP35.81■■■■□ 3.32
SH3GL3-204ENST00000492099 USP16Q9Y5T5 823 aa35.81■■■■□ 3.32
SH3GL3-204ENST00000492099 ZNF784Q8NCA9 323 aaPredicted RBP35.79■■■■□ 3.32
SH3GL3-204ENST00000492099 BCL2L12Q9HB09 334 aa35.79■■■■□ 3.32
SH3GL3-204ENST00000492099 A0A0G2JLW4 131 aa35.78■■■■□ 3.32
SH3GL3-204ENST00000492099 NFIXQ14938 502 aa35.78■■■■□ 3.32
SH3GL3-204ENST00000492099 WWC3Q9ULE0 1092 aa35.78■■■■□ 3.32
SH3GL3-204ENST00000492099 ZNF330Q9Y3S2 320 aaPredicted RBP35.78■■■■□ 3.32
SH3GL3-204ENST00000492099 DLG5Q8TDM6 1919 aa35.78■■■■□ 3.32
SH3GL3-204ENST00000492099 MIS18AQ9NYP9 233 aa35.76■■■■□ 3.32
SH3GL3-204ENST00000492099 PRAMEF22A3QJZ6 481 aa35.75■■■■□ 3.31
SH3GL3-204ENST00000492099 DPEP1P16444 411 aa35.75■■■■□ 3.31
SH3GL3-204ENST00000492099 WDR43Q15061 677 aaKnown RBP eCLIP35.75■■■■□ 3.31
SH3GL3-204ENST00000492099 RIPK4P57078 832 aa35.74■■■■□ 3.31
SH3GL3-204ENST00000492099 THUMPD2Q9BTF0 503 aaKnown RBP35.73■■■■□ 3.31
SH3GL3-204ENST00000492099 TBC1D2BQ9UPU7 963 aa35.73■■■■□ 3.31
SH3GL3-204ENST00000492099 KIAA1551Q9HCM1 1747 aa35.72■■■■□ 3.31
SH3GL3-204ENST00000492099 TMPOP42166 694 aaKnown RBP35.71■■■■□ 3.31
SH3GL3-204ENST00000492099 SERPINB2P05120 415 aa35.7■■■■□ 3.31
SH3GL3-204ENST00000492099 LMOD3Q0VAK6 560 aa35.7■■■■□ 3.31
SH3GL3-204ENST00000492099 N4BP2Q86UW6 1770 aaPredicted RBP35.7■■■■□ 3.31
SH3GL3-204ENST00000492099 BCS1LQ9Y276 419 aa35.7■■■■□ 3.31
SH3GL3-204ENST00000492099 KCNA3P22001 575 aa35.68■■■■□ 3.3
SH3GL3-204ENST00000492099 BICDL1Q6ZP65 573 aa35.67■■■■□ 3.3
SH3GL3-204ENST00000492099 DZIP3Q86Y13 1208 aaKnown RBP35.67■■■■□ 3.3
SH3GL3-204ENST00000492099 RUNDC1Q96C34 613 aa35.67■■■■□ 3.3
SH3GL3-204ENST00000492099 PIM2Q9P1W9 311 aa35.67■■■■□ 3.3
SH3GL3-204ENST00000492099 CAMTA2O94983 1202 aa35.66■■■■□ 3.3
SH3GL3-204ENST00000492099 PIP4K2AP48426 406 aaPredicted RBP35.66■■■■□ 3.3
SH3GL3-204ENST00000492099 EIF4A1P60842 406 aaKnown RBP35.66■■■■□ 3.3
SH3GL3-204ENST00000492099 TBC1D9BQ66K14 1250 aa35.66■■■■□ 3.3
SH3GL3-204ENST00000492099 CCDC146Q8IYE0 955 aa35.66■■■■□ 3.3
SH3GL3-204ENST00000492099 GIGYF1O75420 1035 aaPredicted RBP35.65■■■■□ 3.3
SH3GL3-204ENST00000492099 ADAMTS8Q9UP79 889 aa35.65■■■■□ 3.3
SH3GL3-204ENST00000492099 KDM3BQ7LBC6 1761 aa35.64■■■■□ 3.3
SH3GL3-204ENST00000492099 SCN7AQ01118 1682 aa35.63■■■■□ 3.29
SH3GL3-204ENST00000492099 NRXN2Q9P2S2 1712 aa35.63■■■■□ 3.29
SH3GL3-204ENST00000492099 NBPF26B4DH59 902 aa35.62■■■■□ 3.29
SH3GL3-204ENST00000492099 NBPF10Q6P3W6 841 aaKnown RBP35.62■■■■□ 3.29
SH3GL3-204ENST00000492099 NBPF15Q8N660 670 aa35.62■■■■□ 3.29
SH3GL3-204ENST00000492099 BABAM1Q9NWV8 329 aa35.62■■■■□ 3.29
SH3GL3-204ENST00000492099 TSPYL4Q9UJ04 414 aa35.62■■■■□ 3.29
SH3GL3-204ENST00000492099 CHRNA5P30532 468 aa35.61■■■■□ 3.29
SH3GL3-204ENST00000492099 AFDNP55196 1824 aaKnown RBP35.6■■■■□ 3.29
SH3GL3-204ENST00000492099 DALRD3Q5D0E6 543 aaKnown RBP35.6■■■■□ 3.29
SH3GL3-204ENST00000492099 CLEC4GQ6UXB4 293 aa35.6■■■■□ 3.29
SH3GL3-204ENST00000492099 SETDB2Q96T68 719 aa35.6■■■■□ 3.29
SH3GL3-204ENST00000492099 RRP7AQ9Y3A4 280 aaKnown RBP35.6■■■■□ 3.29
SH3GL3-204ENST00000492099 CARMIL3Q8ND23 1372 aa35.6■■■■□ 3.29
SH3GL3-204ENST00000492099 NEUROD2Q15784 382 aa35.59■■■■□ 3.29
SH3GL3-204ENST00000492099 ZNF316A6NFI3 1004 aaPredicted RBP35.58■■■■□ 3.29
SH3GL3-204ENST00000492099 ZNF652Q9Y2D9 606 aa35.58■■■■□ 3.29
SH3GL3-204ENST00000492099 BRCA1P38398 1863 aaKnown RBP35.57■■■■□ 3.28
SH3GL3-204ENST00000492099 RGL2O15211 777 aa35.57■■■■□ 3.28
SH3GL3-204ENST00000492099 ARHGAP27Q6ZUM4 889 aa35.55■■■■□ 3.28
SH3GL3-204ENST00000492099 LAMB4A4D0S4 1761 aa35.55■■■■□ 3.28
SH3GL3-204ENST00000492099 BCORQ6W2J9 1755 aa35.53■■■■□ 3.28
SH3GL3-204ENST00000492099 PRR5LQ6MZQ0 368 aa35.52■■■■□ 3.28
SH3GL3-204ENST00000492099 BRIP1Q9BX63 1249 aa35.52■■■■□ 3.28
SH3GL3-204ENST00000492099 TRIM35Q9UPQ4 493 aa35.52■■■■□ 3.28
SH3GL3-204ENST00000492099 PDZRN3Q9UPQ7 1066 aa35.52■■■■□ 3.28
SH3GL3-204ENST00000492099 ADCY9O60503 1353 aa35.51■■■■□ 3.28
SH3GL3-204ENST00000492099 H0YIN7 160 aa35.51■■■■□ 3.28
SH3GL3-204ENST00000492099 C2CD5Q86YS7 1000 aa35.51■■■■□ 3.28
SH3GL3-204ENST00000492099 ATP10DQ9P241 1426 aa35.5■■■■□ 3.27
SH3GL3-204ENST00000492099 NPHP1O15259 732 aa35.5■■■■□ 3.27
SH3GL3-204ENST00000492099 PDE6BP35913 854 aa35.5■■■■□ 3.27
SH3GL3-204ENST00000492099 CNBD1Q8NA66 436 aa35.5■■■■□ 3.27
SH3GL3-204ENST00000492099 ERBB4Q15303 1308 aa35.49■■■■□ 3.27
SH3GL3-204ENST00000492099 ARFGEF1Q9Y6D6 1849 aa35.48■■■■□ 3.27
SH3GL3-204ENST00000492099 ST5P78524 1137 aa35.47■■■■□ 3.27
SH3GL3-204ENST00000492099 NGEFQ8N5V2 710 aa35.47■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms