RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 OSBPL3Q9H4L5 887 aa12.96□□□□□ -0.33
SNED1-211ENST00000491761 GORABQ5T7V8 394 aa12.95□□□□□ -0.34
SNED1-211ENST00000491761 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
SNED1-211ENST00000491761 CCAR2Q8N163 923 aaKnown RBP12.95□□□□□ -0.34
SNED1-211ENST00000491761 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
SNED1-211ENST00000491761 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
SNED1-211ENST00000491761 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
SNED1-211ENST00000491761 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 DIAPH3Q9NSV4 1193 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 CCDC173Q0VFZ6 552 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 RUFY2Q8WXA3 655 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 KIF1BPQ96EK5 621 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 NRXN3Q9Y4C0 1643 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 MON2Q7Z3U7 1717 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 DNAAF4Q8WXU2 420 aa12.94□□□□□ -0.34
SNED1-211ENST00000491761 ESPNB1AK53 854 aa12.93□□□□□ -0.34
SNED1-211ENST00000491761 ANAPC15P60006 121 aa12.93□□□□□ -0.34
SNED1-211ENST00000491761 ZNF771Q7L3S4 317 aaPredicted RBP12.93□□□□□ -0.34
SNED1-211ENST00000491761 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
SNED1-211ENST00000491761 TMX3Q96JJ7 454 aa12.93□□□□□ -0.34
SNED1-211ENST00000491761 MBD3O95983 291 aa12.93□□□□□ -0.34
SNED1-211ENST00000491761 CHMLP26374 656 aa12.93□□□□□ -0.34
SNED1-211ENST00000491761 CLASRPQ8N2M8 674 aaKnown RBP12.93□□□□□ -0.34
SNED1-211ENST00000491761 RRAGDQ9NQL2 400 aaPredicted RBP12.93□□□□□ -0.34
SNED1-211ENST00000491761 KDRP35968 1356 aa12.93□□□□□ -0.34
SNED1-211ENST00000491761 MAP4K4O95819 1239 aaPredicted RBP12.93□□□□□ -0.34
SNED1-211ENST00000491761 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
SNED1-211ENST00000491761 RGS12O14924 1447 aa12.92□□□□□ -0.34
SNED1-211ENST00000491761 PTPRUQ92729 1446 aa12.92□□□□□ -0.34
SNED1-211ENST00000491761 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
SNED1-211ENST00000491761 IP6K1Q92551 441 aa12.92□□□□□ -0.34
SNED1-211ENST00000491761 C3P01024 1663 aa12.92□□□□□ -0.34
SNED1-211ENST00000491761 VPS37CA5D8V6 355 aaPredicted RBP12.92□□□□□ -0.34
SNED1-211ENST00000491761 FOSBP53539 338 aa12.92□□□□□ -0.34
SNED1-211ENST00000491761 PHAXQ9H814 394 aaKnown RBP12.92□□□□□ -0.34
SNED1-211ENST00000491761 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
SNED1-211ENST00000491761 UPF3BQ9BZI7 483 aaKnown RBP12.92□□□□□ -0.34
SNED1-211ENST00000491761 PI4KAP2A4QPH2 592 aa12.91□□□□□ -0.34
SNED1-211ENST00000491761 DDX58O95786 925 aaKnown RBP12.91□□□□□ -0.34
SNED1-211ENST00000491761 PI4KAP1Q8N8J0 262 aa12.91□□□□□ -0.34
SNED1-211ENST00000491761 RHPN1Q8TCX5 695 aa12.91□□□□□ -0.34
SNED1-211ENST00000491761 USP44Q9H0E7 712 aa12.91□□□□□ -0.34
SNED1-211ENST00000491761 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
SNED1-211ENST00000491761 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
SNED1-211ENST00000491761 ZMYND15Q9H091 742 aa12.91□□□□□ -0.34
SNED1-211ENST00000491761 CHPF2Q9P2E5 772 aa12.91□□□□□ -0.34
SNED1-211ENST00000491761 IBTKQ9P2D0 1353 aaPredicted RBP12.91□□□□□ -0.34
SNED1-211ENST00000491761 TAF7LQ5H9L4 462 aa12.9□□□□□ -0.34
SNED1-211ENST00000491761 MPRIPQ6WCQ1 1025 aa12.9□□□□□ -0.34
SNED1-211ENST00000491761 AOX1Q06278 1338 aa12.9□□□□□ -0.34
SNED1-211ENST00000491761 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
SNED1-211ENST00000491761 PHF14O94880 888 aa12.9□□□□□ -0.34
SNED1-211ENST00000491761 DBF4Q9UBU7 674 aaPredicted RBP12.9□□□□□ -0.34
SNED1-211ENST00000491761 CLCN1P35523 988 aa12.9□□□□□ -0.35
SNED1-211ENST00000491761 GAS2L3Q86XJ1 694 aa12.9□□□□□ -0.35
SNED1-211ENST00000491761 ERC1Q8IUD2 1116 aa12.9□□□□□ -0.35
SNED1-211ENST00000491761 PDE4CQ08493 712 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 SF3A1Q15459 793 aaKnown RBP12.89□□□□□ -0.35
SNED1-211ENST00000491761 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 BECN2A8MW95 431 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 HOXB7P09629 217 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 G3BP1Q13283 466 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNED1-211ENST00000491761 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
SNED1-211ENST00000491761 CLEC17AQ6ZS10 378 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 SSH3Q8TE77 659 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 STAP2Q9UGK3 403 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 ADAMTS2O95450 1211 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 ZSCAN23Q3MJ62 389 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
SNED1-211ENST00000491761 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
SNED1-211ENST00000491761 GLRX3O76003 335 aaKnown RBP12.88□□□□□ -0.35
SNED1-211ENST00000491761 ANXA1P04083 346 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 NEXNQ0ZGT2 675 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
SNED1-211ENST00000491761 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 TMX4Q9H1E5 349 aaPredicted RBP12.88□□□□□ -0.35
SNED1-211ENST00000491761 LGR6Q9HBX8 967 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 SMC3Q9UQE7 1217 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 ATP6V1DQ9Y5K8 247 aa12.88□□□□□ -0.35
SNED1-211ENST00000491761 ZKSCAN1P17029 563 aaPredicted RBP12.87□□□□□ -0.35
SNED1-211ENST00000491761 EIF4A1P60842 406 aaKnown RBP12.87□□□□□ -0.35
SNED1-211ENST00000491761 AIMP1Q12904 312 aaKnown RBP12.87□□□□□ -0.35
SNED1-211ENST00000491761 PKP1Q13835 747 aa12.87□□□□□ -0.35
SNED1-211ENST00000491761 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
SNED1-211ENST00000491761 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
SNED1-211ENST00000491761 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
SNED1-211ENST00000491761 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
SNED1-211ENST00000491761 UBR1Q8IWV7 1749 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.86□□□□□ -0.35
SNED1-211ENST00000491761 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 GOLGA6L19H0YKK7 550 aa12.86□□□□□ -0.35
SNED1-211ENST00000491761 RIC3Q7Z5B4 369 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms