RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 SLC12A5Q9H2X9 1139 aa12.52□□□□□ -0.4
SREBF2-208ENST00000491541 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.4
SREBF2-208ENST00000491541 LRP5O75197 1615 aa12.52□□□□□ -0.4
SREBF2-208ENST00000491541 RGPD2P0DJD1 1756 aa12.52□□□□□ -0.41
SREBF2-208ENST00000491541 SHANK3Q9BYB0 1731 aa12.52□□□□□ -0.41
SREBF2-208ENST00000491541 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
SREBF2-208ENST00000491541 POLA2Q14181 598 aa12.52□□□□□ -0.41
SREBF2-208ENST00000491541 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
SREBF2-208ENST00000491541 POLKQ9UBT6 870 aa12.52□□□□□ -0.41
SREBF2-208ENST00000491541 HSPA4P34932 840 aa12.52□□□□□ -0.41
SREBF2-208ENST00000491541 HAP1P54257 671 aaPredicted RBP12.52□□□□□ -0.41
SREBF2-208ENST00000491541 PDCL2Q8N4E4 241 aa12.52□□□□□ -0.41
SREBF2-208ENST00000491541 LAMB2P55268 1798 aa12.51□□□□□ -0.41
SREBF2-208ENST00000491541 ADAMTS13Q76LX8 1427 aa12.51□□□□□ -0.41
SREBF2-208ENST00000491541 FBXL16Q8N461 479 aa12.51□□□□□ -0.41
SREBF2-208ENST00000491541 UQCRHLA0A096LP55 91 aa12.51□□□□□ -0.41
SREBF2-208ENST00000491541 UQCRHP07919 91 aa12.51□□□□□ -0.41
SREBF2-208ENST00000491541 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
SREBF2-208ENST00000491541 NPHP4O75161 1426 aaPredicted RBP12.5□□□□□ -0.41
SREBF2-208ENST00000491541 AFDNP55196 1824 aaKnown RBP12.5□□□□□ -0.41
SREBF2-208ENST00000491541 KCNF1Q9H3M0 494 aa12.5□□□□□ -0.41
SREBF2-208ENST00000491541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.413e-7■□□□□ 11.1
SREBF2-208ENST00000491541 CAVIN2O95810 425 aa12.5□□□□□ -0.41
SREBF2-208ENST00000491541 MTX1Q13505 466 aa12.5□□□□□ -0.41
SREBF2-208ENST00000491541 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
SREBF2-208ENST00000491541 TUBB4AP04350 444 aa12.5□□□□□ -0.41
SREBF2-208ENST00000491541 XPCQ01831 940 aaPredicted RBP12.5□□□□□ -0.41
SREBF2-208ENST00000491541 SRCIN1Q9C0H9 1055 aa12.5□□□□□ -0.41
SREBF2-208ENST00000491541 SMC4Q9NTJ3 1288 aa12.5□□□□□ -0.41
SREBF2-208ENST00000491541 PHF14O94880 888 aa12.49□□□□□ -0.41
SREBF2-208ENST00000491541 USP6P35125 1406 aa12.49□□□□□ -0.41
SREBF2-208ENST00000491541 KIAA2012Q0VF49 1180 aa12.49□□□□□ -0.41
SREBF2-208ENST00000491541 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
SREBF2-208ENST00000491541 KIF1BPQ96EK5 621 aa12.49□□□□□ -0.41
SREBF2-208ENST00000491541 DDX41Q9UJV9 622 aaKnown RBP12.49□□□□□ -0.41
SREBF2-208ENST00000491541 ATAD5Q96QE3 1844 aa12.49□□□□□ -0.41
SREBF2-208ENST00000491541 CTNNA3Q9UI47 895 aa12.49□□□□□ -0.41
SREBF2-208ENST00000491541 UTYO14607 1347 aa12.49□□□□□ -0.41
SREBF2-208ENST00000491541 MX1P20591 662 aa12.48□□□□□ -0.41
SREBF2-208ENST00000491541 REC8O95072 547 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 SDSP20132 328 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 MBIPQ9NS73 344 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 OGFRQ9NZT2 677 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
SREBF2-208ENST00000491541 CARMIL3Q8ND23 1372 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 ANKRD36CQ5JPF3 1778 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 KDM4AO75164 1064 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 CCDC183Q5T5S1 534 aa12.47□□□□□ -0.41
SREBF2-208ENST00000491541 ERC2O15083 957 aa12.46□□□□□ -0.41
SREBF2-208ENST00000491541 DIAPH1O60610 1272 aaKnown RBP12.46□□□□□ -0.41
SREBF2-208ENST00000491541 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
SREBF2-208ENST00000491541 AFAP1Q8N556 730 aa12.46□□□□□ -0.41
SREBF2-208ENST00000491541 L2HGDHQ9H9P8 463 aa12.46□□□□□ -0.41
SREBF2-208ENST00000491541 MAP3K15Q6ZN16 1313 aa12.46□□□□□ -0.41
SREBF2-208ENST00000491541 SLFN14P0C7P3 912 aa12.46□□□□□ -0.42
SREBF2-208ENST00000491541 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.42
SREBF2-208ENST00000491541 NOLC1Q14978 699 aaKnown RBP eCLIP12.46□□□□□ -0.422e-13■□□□□ 9.6
SREBF2-208ENST00000491541 IQUBQ8NA54 791 aa12.46□□□□□ -0.42
SREBF2-208ENST00000491541 TDRD7Q8NHU6 1098 aaKnown RBP12.46□□□□□ -0.42
SREBF2-208ENST00000491541 TSPY26PQ9H489 355 aa12.46□□□□□ -0.42
SREBF2-208ENST00000491541 MPNDQ8N594 471 aa12.45□□□□□ -0.42
SREBF2-208ENST00000491541 CHD4Q14839 1912 aa12.45□□□□□ -0.42
SREBF2-208ENST00000491541 ST18O60284 1047 aa12.45□□□□□ -0.42
SREBF2-208ENST00000491541 UBE2HP62256 183 aa12.45□□□□□ -0.42
SREBF2-208ENST00000491541 PKP1Q13835 747 aa12.45□□□□□ -0.42
SREBF2-208ENST00000491541 BPIFA3Q9BQP9 254 aa12.45□□□□□ -0.42
SREBF2-208ENST00000491541 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
SREBF2-208ENST00000491541 TMX3Q96JJ7 454 aa12.44□□□□□ -0.42
SREBF2-208ENST00000491541 ATP8B1O43520 1251 aa12.44□□□□□ -0.42
SREBF2-208ENST00000491541 CAVIN1Q6NZI2 390 aaKnown RBP12.44□□□□□ -0.42
SREBF2-208ENST00000491541 SYAP1Q96A49 352 aaPredicted RBP12.44□□□□□ -0.42
SREBF2-208ENST00000491541 AP5Z1O43299 807 aa12.44□□□□□ -0.42
SREBF2-208ENST00000491541 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
SREBF2-208ENST00000491541 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
SREBF2-208ENST00000491541 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
SREBF2-208ENST00000491541 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
SREBF2-208ENST00000491541 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
SREBF2-208ENST00000491541 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
SREBF2-208ENST00000491541 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 HOXB7P09629 217 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 MCTP1Q6DN14 999 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 SMTNL1A8MU46 457 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 H2AFXP16104 143 aaPredicted RBP12.42□□□□□ -0.42
SREBF2-208ENST00000491541 PDE1AP54750 535 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 ATP2B3Q16720 1220 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 RNF214Q8ND24 703 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
SREBF2-208ENST00000491541 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 ELOA2Q8IYF1 753 aaPredicted RBP12.42□□□□□ -0.42
SREBF2-208ENST00000491541 SSH3Q8TE77 659 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 KIF13BQ9NQT8 1826 aa12.42□□□□□ -0.42
SREBF2-208ENST00000491541 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
SREBF2-208ENST00000491541 NEDD4P46934 1319 aa12.41□□□□□ -0.42
SREBF2-208ENST00000491541 FGD1P98174 961 aa12.41□□□□□ -0.42
SREBF2-208ENST00000491541 NCBP1Q09161 790 aaKnown RBP12.41□□□□□ -0.42
SREBF2-208ENST00000491541 ST3GAL1Q11201 340 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms