RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 KNSTRNQ9Y448 316 aa19.03■□□□□ 0.64
NCK1-211ENST00000491539 POLRMTO00411 1230 aaKnown RBP19.02■□□□□ 0.64
NCK1-211ENST00000491539 CABP4P57796 275 aa19.02■□□□□ 0.64
NCK1-211ENST00000491539 AMER1Q5JTC6 1135 aaPredicted RBP19.02■□□□□ 0.64
NCK1-211ENST00000491539 DALRD3Q5D0E6 543 aaKnown RBP19.01■□□□□ 0.63
NCK1-211ENST00000491539 MORC1Q86VD1 984 aa19.01■□□□□ 0.63
NCK1-211ENST00000491539 RRAGCQ9HB90 399 aa19.01■□□□□ 0.63
NCK1-211ENST00000491539 PIM2Q9P1W9 311 aa19.01■□□□□ 0.63
NCK1-211ENST00000491539 INTS5Q6P9B9 1019 aaKnown RBP19■□□□□ 0.63
NCK1-211ENST00000491539 CAPN15O75808 1086 aa18.99■□□□□ 0.63
NCK1-211ENST00000491539 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
NCK1-211ENST00000491539 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
NCK1-211ENST00000491539 SOS1Q07889 1333 aaPredicted RBP18.99■□□□□ 0.63
NCK1-211ENST00000491539 KDM2BQ8NHM5 1336 aa18.99■□□□□ 0.63
NCK1-211ENST00000491539 COL15A1P39059 1388 aa18.98■□□□□ 0.63
NCK1-211ENST00000491539 PER1O15534 1290 aaPredicted RBP18.98■□□□□ 0.63
NCK1-211ENST00000491539 FSTL1Q12841 308 aa18.98■□□□□ 0.63
NCK1-211ENST00000491539 PLEKHO1Q53GL0 409 aaPredicted RBP18.98■□□□□ 0.63
NCK1-211ENST00000491539 NFATC2IPQ8NCF5 419 aa18.98■□□□□ 0.63
NCK1-211ENST00000491539 USPL1Q5W0Q7 1092 aa18.97■□□□□ 0.63
NCK1-211ENST00000491539 DNAJC10Q8IXB1 793 aa18.97■□□□□ 0.63
NCK1-211ENST00000491539 SLX4Q8IY92 1834 aa18.96■□□□□ 0.63
NCK1-211ENST00000491539 MTHFSP49914 203 aa18.96■□□□□ 0.63
NCK1-211ENST00000491539 TM4SF1P30408 202 aa18.95■□□□□ 0.62
NCK1-211ENST00000491539 BCL2L12Q9HB09 334 aa18.94■□□□□ 0.62
NCK1-211ENST00000491539 NFIXQ14938 502 aa18.93■□□□□ 0.62
NCK1-211ENST00000491539 AMOTQ4VCS5 1084 aa18.93■□□□□ 0.62
NCK1-211ENST00000491539 C1orf141Q5JVX7 400 aa18.93■□□□□ 0.62
NCK1-211ENST00000491539 SULT6B1Q6IMI4 303 aa18.93■□□□□ 0.62
NCK1-211ENST00000491539 ZBTB1Q9Y2K1 713 aa18.93■□□□□ 0.62
NCK1-211ENST00000491539 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
NCK1-211ENST00000491539 SMC1BQ8NDV3 1235 aa18.92■□□□□ 0.62
NCK1-211ENST00000491539 NFKBIEO00221 500 aa18.91■□□□□ 0.62
NCK1-211ENST00000491539 SLC39A6Q13433 755 aa18.91■□□□□ 0.62
NCK1-211ENST00000491539 CYP19A1P11511 503 aaPredicted RBP18.9■□□□□ 0.62
NCK1-211ENST00000491539 IL13P35225 146 aa18.9■□□□□ 0.62
NCK1-211ENST00000491539 TNS4Q8IZW8 715 aa18.9■□□□□ 0.62
NCK1-211ENST00000491539 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
NCK1-211ENST00000491539 ZC3H4Q9UPT8 1303 aaKnown RBP18.9■□□□□ 0.62
NCK1-211ENST00000491539 ADAMTSL1Q8N6G6 1762 aa18.89■□□□□ 0.61
NCK1-211ENST00000491539 HSPA1AP0DMV8 641 aaKnown RBP18.89■□□□□ 0.61
NCK1-211ENST00000491539 HSPA1BP0DMV9 641 aaKnown RBP18.89■□□□□ 0.61
NCK1-211ENST00000491539 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
NCK1-211ENST00000491539 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
NCK1-211ENST00000491539 CC2D1BQ5T0F9 858 aaKnown RBP18.88■□□□□ 0.61
NCK1-211ENST00000491539 POTECB2RU33 542 aa18.87■□□□□ 0.61
NCK1-211ENST00000491539 ZPR1O75312 459 aa18.87■□□□□ 0.61
NCK1-211ENST00000491539 LMNB1P20700 586 aa18.87■□□□□ 0.61
NCK1-211ENST00000491539 SCN4AP35499 1836 aa18.87■□□□□ 0.61
NCK1-211ENST00000491539 NARFQ9UHQ1 456 aa18.87■□□□□ 0.61
NCK1-211ENST00000491539 GLTPD2A6NH11 291 aa18.86■□□□□ 0.61
NCK1-211ENST00000491539 SERPINB2P05120 415 aa18.85■□□□□ 0.61
NCK1-211ENST00000491539 AKAP4Q5JQC9 854 aa18.85■□□□□ 0.61
NCK1-211ENST00000491539 RNMTO43148 476 aaKnown RBP18.84■□□□□ 0.61
NCK1-211ENST00000491539 C2CD5Q86YS7 1000 aa18.84■□□□□ 0.61
NCK1-211ENST00000491539 CCDC24Q8N4L8 307 aa18.84■□□□□ 0.61
NCK1-211ENST00000491539 LAMB4A4D0S4 1761 aa18.83■□□□□ 0.61
NCK1-211ENST00000491539 HMOX1P09601 288 aa18.83■□□□□ 0.6
NCK1-211ENST00000491539 POTEIP0CG38 1075 aa18.83■□□□□ 0.6
NCK1-211ENST00000491539 POTEJP0CG39 1038 aa18.83■□□□□ 0.6
NCK1-211ENST00000491539 BICDL1Q6ZP65 573 aa18.82■□□□□ 0.6
NCK1-211ENST00000491539 TTLL6Q8N841 843 aa18.82■□□□□ 0.6
NCK1-211ENST00000491539 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
NCK1-211ENST00000491539 ZNF219Q9P2Y4 722 aaPredicted RBP18.81■□□□□ 0.6
NCK1-211ENST00000491539 CANXP27824 592 aaKnown RBP18.8■□□□□ 0.6
NCK1-211ENST00000491539 MTHFSDQ2M296 383 aaKnown RBP18.8■□□□□ 0.6
NCK1-211ENST00000491539 TBC1D9BQ66K14 1250 aa18.8■□□□□ 0.6
NCK1-211ENST00000491539 THSD7BQ9C0I4 1608 aa18.79■□□□□ 0.6
NCK1-211ENST00000491539 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
NCK1-211ENST00000491539 PRR5LQ6MZQ0 368 aa18.78■□□□□ 0.6
NCK1-211ENST00000491539 LTBP1Q14766 1721 aa18.77■□□□□ 0.6
NCK1-211ENST00000491539 C21orf2O43822 256 aa18.77■□□□□ 0.6
NCK1-211ENST00000491539 EIF5P55010 431 aaKnown RBP18.77■□□□□ 0.6
NCK1-211ENST00000491539 H0YIN7 160 aa18.76■□□□□ 0.59
NCK1-211ENST00000491539 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
NCK1-211ENST00000491539 CNGB1Q14028 1251 aaPredicted RBP18.75■□□□□ 0.59
NCK1-211ENST00000491539 HEG1Q9ULI3 1381 aa18.75■□□□□ 0.59
NCK1-211ENST00000491539 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
NCK1-211ENST00000491539 COL4A5P29400 1685 aa18.74■□□□□ 0.59
NCK1-211ENST00000491539 VSIG10Q8N0Z9 540 aa18.74■□□□□ 0.59
NCK1-211ENST00000491539 ZNF622Q969S3 477 aaKnown RBP eCLIP18.74■□□□□ 0.59
NCK1-211ENST00000491539 ZNF496Q96IT1 587 aaPredicted RBP18.74■□□□□ 0.59
NCK1-211ENST00000491539 ERFEQ4G0M1 354 aa18.73■□□□□ 0.59
NCK1-211ENST00000491539 TBC1D2BQ9UPU7 963 aa18.73■□□□□ 0.59
NCK1-211ENST00000491539 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
NCK1-211ENST00000491539 LTBP3Q9NS15 1303 aa18.73■□□□□ 0.59
NCK1-211ENST00000491539 NUP98P52948 1817 aa18.72■□□□□ 0.59
NCK1-211ENST00000491539 DDNO94850 711 aaPredicted RBP18.72■□□□□ 0.59
NCK1-211ENST00000491539 KDM3BQ7LBC6 1761 aa18.72■□□□□ 0.59
NCK1-211ENST00000491539 CNTNAP1P78357 1384 aa18.71■□□□□ 0.59
NCK1-211ENST00000491539 FOXN1O15353 648 aa18.71■□□□□ 0.59
NCK1-211ENST00000491539 CHADLQ6NUI6 762 aa18.71■□□□□ 0.59
NCK1-211ENST00000491539 TAOK3Q9H2K8 898 aa18.71■□□□□ 0.59
NCK1-211ENST00000491539 TRPM7Q96QT4 1865 aa18.71■□□□□ 0.59
NCK1-211ENST00000491539 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
NCK1-211ENST00000491539 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
NCK1-211ENST00000491539 PRPF40BQ6NWY9 871 aaKnown RBP18.7■□□□□ 0.58
NCK1-211ENST00000491539 BRIP1Q9BX63 1249 aa18.7■□□□□ 0.58
NCK1-211ENST00000491539 CREBZFQ9NS37 354 aa18.7■□□□□ 0.58
NCK1-211ENST00000491539 PASKQ96RG2 1323 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms