RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SLC4A9Q96Q91 983 aa27.89■■■□□ 2.06
VCPKMT-204ENST00000491402 CHMP4AQ9BY43 222 aa27.89■■■□□ 2.06
VCPKMT-204ENST00000491402 CCNL1Q9UK58 526 aaPredicted RBP27.89■■■□□ 2.06
VCPKMT-204ENST00000491402 CICQ96RK0 1608 aaPredicted RBP27.89■■■□□ 2.05
VCPKMT-204ENST00000491402 ZNF831Q5JPB2 1677 aa27.89■■■□□ 2.05
VCPKMT-204ENST00000491402 LRRC4BQ9NT99 713 aa27.88■■■□□ 2.05
VCPKMT-204ENST00000491402 USP16Q9Y5T5 823 aa27.88■■■□□ 2.05
VCPKMT-204ENST00000491402 LY75O60449 1722 aa27.88■■■□□ 2.05
VCPKMT-204ENST00000491402 RNF123Q5XPI4 1314 aa27.88■■■□□ 2.05
VCPKMT-204ENST00000491402 STK31Q9BXU1 1019 aa27.87■■■□□ 2.05
VCPKMT-204ENST00000491402 ATP6V1AP38606 617 aa27.86■■■□□ 2.05
VCPKMT-204ENST00000491402 BRPF1P55201 1214 aaPredicted RBP27.86■■■□□ 2.05
VCPKMT-204ENST00000491402 MRPL50Q8N5N7 158 aaKnown RBP27.86■■■□□ 2.05
VCPKMT-204ENST00000491402 SLC27A3Q5K4L6 730 aa27.86■■■□□ 2.05
VCPKMT-204ENST00000491402 RGPD3A6NKT7 1758 aaPredicted RBP27.85■■■□□ 2.05
VCPKMT-204ENST00000491402 RGPD4Q7Z3J3 1758 aa27.85■■■□□ 2.05
VCPKMT-204ENST00000491402 RRP1P56182 461 aaKnown RBP27.85■■■□□ 2.05
VCPKMT-204ENST00000491402 TEX13AQ9BXU3 409 aaPredicted RBP27.85■■■□□ 2.05
VCPKMT-204ENST00000491402 SLC4A2P04920 1241 aa27.84■■■□□ 2.05
VCPKMT-204ENST00000491402 DNAJC10Q8IXB1 793 aa27.84■■■□□ 2.05
VCPKMT-204ENST00000491402 CHPF2Q9P2E5 772 aa27.84■■■□□ 2.05
VCPKMT-204ENST00000491402 KIF16BQ96L93 1317 aa27.83■■■□□ 2.05
VCPKMT-204ENST00000491402 ITPK1Q13572 414 aa27.83■■■□□ 2.05
VCPKMT-204ENST00000491402 DBF4Q9UBU7 674 aaPredicted RBP27.83■■■□□ 2.05
VCPKMT-204ENST00000491402 FRAT1Q92837 279 aaPredicted RBP27.82■■■□□ 2.04
VCPKMT-204ENST00000491402 COL5A3P25940 1745 aaPredicted RBP27.82■■■□□ 2.04
VCPKMT-204ENST00000491402 PLIN1O60240 522 aa27.81■■■□□ 2.04
VCPKMT-204ENST00000491402 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.81■■■□□ 2.04
VCPKMT-204ENST00000491402 STARD3NLO95772 234 aa27.8■■■□□ 2.04
VCPKMT-204ENST00000491402 NOB1Q9ULX3 412 aaKnown RBP27.8■■■□□ 2.04
VCPKMT-204ENST00000491402 PDIA6Q15084 440 aa27.79■■■□□ 2.04
VCPKMT-204ENST00000491402 DDX21Q9NR30 783 aaKnown RBP eCLIP27.79■■■□□ 2.04
VCPKMT-204ENST00000491402 ERBB4Q15303 1308 aa27.79■■■□□ 2.04
VCPKMT-204ENST00000491402 CANXP27824 592 aaKnown RBP27.78■■■□□ 2.04
VCPKMT-204ENST00000491402 PROSER3Q2NL68 480 aa27.78■■■□□ 2.04
VCPKMT-204ENST00000491402 RREB1Q92766 1687 aa27.78■■■□□ 2.04
VCPKMT-204ENST00000491402 ANXA1P04083 346 aa27.78■■■□□ 2.04
VCPKMT-204ENST00000491402 CYP19A1P11511 503 aaPredicted RBP27.78■■■□□ 2.04
VCPKMT-204ENST00000491402 LINC00116Q8NCU8 138 aa27.78■■■□□ 2.04
VCPKMT-204ENST00000491402 TAF1LQ8IZX4 1826 aa27.77■■■□□ 2.04
VCPKMT-204ENST00000491402 G2E3Q7L622 706 aa27.77■■■□□ 2.04
VCPKMT-204ENST00000491402 A1BGP04217 495 aa27.76■■■□□ 2.03
VCPKMT-204ENST00000491402 PIP4K2AP48426 406 aaPredicted RBP27.76■■■□□ 2.03
VCPKMT-204ENST00000491402 ZKSCAN2Q63HK3 967 aa27.76■■■□□ 2.03
VCPKMT-204ENST00000491402 HYPKQ9NX55 129 aa27.76■■■□□ 2.03
VCPKMT-204ENST00000491402 MYH14Q7Z406 1995 aaKnown RBP27.75■■■□□ 2.03
VCPKMT-204ENST00000491402 IPO8O15397 1037 aaKnown RBP27.75■■■□□ 2.03
VCPKMT-204ENST00000491402 MYL6BP14649 208 aa27.75■■■□□ 2.03
VCPKMT-204ENST00000491402 FLIIQ13045 1269 aa27.75■■■□□ 2.03
VCPKMT-204ENST00000491402 PHAXQ9H814 394 aaKnown RBP27.75■■■□□ 2.03
VCPKMT-204ENST00000491402 NUP188Q5SRE5 1749 aa27.75■■■□□ 2.03
VCPKMT-204ENST00000491402 NBPF26B4DH59 902 aa27.74■■■□□ 2.03
VCPKMT-204ENST00000491402 NBPF14Q5TI25 921 aa27.74■■■□□ 2.03
VCPKMT-204ENST00000491402 NBPF10Q6P3W6 841 aaKnown RBP27.74■■■□□ 2.03
VCPKMT-204ENST00000491402 NBPF15Q8N660 670 aa27.74■■■□□ 2.03
VCPKMT-204ENST00000491402 PTPRCP08575 1304 aa27.74■■■□□ 2.03
VCPKMT-204ENST00000491402 TRIM27P14373 513 aa27.73■■■□□ 2.03
VCPKMT-204ENST00000491402 ATF7IPQ6VMQ6 1270 aa27.73■■■□□ 2.03
VCPKMT-204ENST00000491402 LRP10Q7Z4F1 713 aa27.73■■■□□ 2.03
VCPKMT-204ENST00000491402 ARHGAP45Q92619 1136 aa27.73■■■□□ 2.03
VCPKMT-204ENST00000491402 ANO8Q9HCE9 1232 aaPredicted RBP27.72■■■□□ 2.03
VCPKMT-204ENST00000491402 CRKLP46109 303 aaKnown RBP27.71■■■□□ 2.03
VCPKMT-204ENST00000491402 ZNF827Q17R98 1081 aa27.71■■■□□ 2.03
VCPKMT-204ENST00000491402 TNNQ9UQP3 1299 aa27.71■■■□□ 2.03
VCPKMT-204ENST00000491402 ZBTB1Q9Y2K1 713 aa27.71■■■□□ 2.03
VCPKMT-204ENST00000491402 FKBP5Q13451 457 aaPredicted RBP27.7■■■□□ 2.02
VCPKMT-204ENST00000491402 C20orf194Q5TEA3 1177 aa27.7■■■□□ 2.02
VCPKMT-204ENST00000491402 HMGB2P26583 209 aaKnown RBP27.69■■■□□ 2.02
VCPKMT-204ENST00000491402 AKT1S1Q96B36 256 aa27.69■■■□□ 2.02
VCPKMT-204ENST00000491402 CCDC87Q9NVE4 849 aa27.69■■■□□ 2.02
VCPKMT-204ENST00000491402 STK32BQ9NY57 414 aa27.69■■■□□ 2.02
VCPKMT-204ENST00000491402 IRX6P78412 446 aaPredicted RBP27.68■■■□□ 2.02
VCPKMT-204ENST00000491402 INTS5Q6P9B9 1019 aaKnown RBP27.68■■■□□ 2.02
VCPKMT-204ENST00000491402 CLUAP1Q96AJ1 413 aa27.68■■■□□ 2.02
VCPKMT-204ENST00000491402 API5Q9BZZ5 524 aaKnown RBP27.68■■■□□ 2.02
VCPKMT-204ENST00000491402 C4BP0C0L5 1744 aa27.68■■■□□ 2.02
VCPKMT-204ENST00000491402 PDE3AQ14432 1141 aa27.68■■■□□ 2.02
VCPKMT-204ENST00000491402 SLC15A2Q16348 729 aa27.68■■■□□ 2.02
VCPKMT-204ENST00000491402 CNTNAP4Q9C0A0 1308 aa27.68■■■□□ 2.02
VCPKMT-204ENST00000491402 NEFLP07196 543 aa27.67■■■□□ 2.02
VCPKMT-204ENST00000491402 AK7Q96M32 723 aa27.67■■■□□ 2.02
VCPKMT-204ENST00000491402 RC3H1Q5TC82 1133 aaKnown RBP27.66■■■□□ 2.02
VCPKMT-204ENST00000491402 COPS6Q7L5N1 327 aa27.66■■■□□ 2.02
VCPKMT-204ENST00000491402 FTSJ3Q8IY81 847 aaKnown RBP27.66■■■□□ 2.02
VCPKMT-204ENST00000491402 DZIP1LQ8IYY4 767 aaKnown RBP27.66■■■□□ 2.02
VCPKMT-204ENST00000491402 XAGE3Q8WTP9 111 aa27.66■■■□□ 2.02
VCPKMT-204ENST00000491402 TFCP2L1Q9NZI6 479 aa27.66■■■□□ 2.02
VCPKMT-204ENST00000491402 RLBP1P12271 317 aa27.65■■■□□ 2.02
VCPKMT-204ENST00000491402 AIMP1Q12904 312 aaKnown RBP27.65■■■□□ 2.02
VCPKMT-204ENST00000491402 SMIM5Q71RC9 77 aa27.65■■■□□ 2.02
VCPKMT-204ENST00000491402 PANK1Q8TE04 598 aa27.65■■■□□ 2.02
VCPKMT-204ENST00000491402 GNPATO15228 680 aa27.65■■■□□ 2.02
VCPKMT-204ENST00000491402 MS4A1P11836 297 aa27.65■■■□□ 2.02
VCPKMT-204ENST00000491402 ABCC4O15439 1325 aa27.64■■■□□ 2.02
VCPKMT-204ENST00000491402 IL6STP40189 918 aaPredicted RBP27.64■■■□□ 2.02
VCPKMT-204ENST00000491402 ZNF330Q9Y3S2 320 aaPredicted RBP27.64■■■□□ 2.02
VCPKMT-204ENST00000491402 AMIGO3Q86WK7 504 aa27.63■■■□□ 2.01
VCPKMT-204ENST00000491402 F6X3S4 739 aa27.63■■■□□ 2.01
VCPKMT-204ENST00000491402 ADCY9O60503 1353 aa27.62■■■□□ 2.01
VCPKMT-204ENST00000491402 PI4KAP2A4QPH2 592 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms