RNA–Protein interactions for RNA: ENST00000491248.1

SPEG-221, Transcript of SPEG complex locus, humanhuman

TSL 4

Gene SPEG, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-221ENST00000491248 COL15A1P39059 1388 aa25.71■■□□□ 1.71
SPEG-221ENST00000491248 BTBD11A6QL63 1104 aa25.7■■□□□ 1.7
SPEG-221ENST00000491248 DCTN1Q14203 1278 aa25.7■■□□□ 1.7
SPEG-221ENST00000491248 C10orf71Q711Q0 1435 aa25.7■■□□□ 1.7
SPEG-221ENST00000491248 MYBBP1AQ9BQG0 1328 aaKnown RBP25.69■■□□□ 1.7
SPEG-221ENST00000491248 YBX3P16989 372 aaKnown RBP eCLIP25.69■■□□□ 1.7
SPEG-221ENST00000491248 KCNQ3O43525 872 aa25.68■■□□□ 1.7
SPEG-221ENST00000491248 FMNL2Q96PY5 1086 aa25.68■■□□□ 1.7
SPEG-221ENST00000491248 PLEKHF1Q96S99 279 aa25.68■■□□□ 1.7
SPEG-221ENST00000491248 BCORQ6W2J9 1755 aa25.68■■□□□ 1.7
SPEG-221ENST00000491248 HTATSF1O43719 755 aaKnown RBP25.67■■□□□ 1.7
SPEG-221ENST00000491248 STARD3NLO95772 234 aa25.67■■□□□ 1.7
SPEG-221ENST00000491248 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
SPEG-221ENST00000491248 FKBP8Q14318 412 aa25.66■■□□□ 1.7
SPEG-221ENST00000491248 PARP3Q9Y6F1 533 aa25.66■■□□□ 1.7
SPEG-221ENST00000491248 PXDNLA1KZ92 1463 aa25.66■■□□□ 1.7
SPEG-221ENST00000491248 NRXN2Q9P2S2 1712 aa25.66■■□□□ 1.7
SPEG-221ENST00000491248 MAPK8IP3Q9UPT6 1336 aa25.65■■□□□ 1.7
SPEG-221ENST00000491248 ZPR1O75312 459 aa25.65■■□□□ 1.7
SPEG-221ENST00000491248 CANXP27824 592 aaKnown RBP25.65■■□□□ 1.7
SPEG-221ENST00000491248 USPL1Q5W0Q7 1092 aa25.64■■□□□ 1.7
SPEG-221ENST00000491248 WWC3Q9ULE0 1092 aa25.64■■□□□ 1.7
SPEG-221ENST00000491248 NFE2L2Q16236 605 aa25.63■■□□□ 1.69
SPEG-221ENST00000491248 TEX13AQ9BXU3 409 aaPredicted RBP25.63■■□□□ 1.69
SPEG-221ENST00000491248 PNNQ9H307 717 aaKnown RBP25.63■■□□□ 1.69
SPEG-221ENST00000491248 NARFQ9UHQ1 456 aa25.62■■□□□ 1.69
SPEG-221ENST00000491248 ARFGEF1Q9Y6D6 1849 aa25.62■■□□□ 1.69
SPEG-221ENST00000491248 GRIN3BO60391 1043 aa25.61■■□□□ 1.69
SPEG-221ENST00000491248 DDR1Q08345 913 aa25.61■■□□□ 1.69
SPEG-221ENST00000491248 ZNF330Q9Y3S2 320 aaPredicted RBP25.6■■□□□ 1.69
SPEG-221ENST00000491248 DLEC1Q9Y238 1755 aa25.59■■□□□ 1.69
SPEG-221ENST00000491248 EIF5P55010 431 aaKnown RBP25.59■■□□□ 1.69
SPEG-221ENST00000491248 TAF7Q15545 349 aaPredicted RBP25.58■■□□□ 1.69
SPEG-221ENST00000491248 PRAMEF22A3QJZ6 481 aa25.57■■□□□ 1.68
SPEG-221ENST00000491248 THUMPD2Q9BTF0 503 aaKnown RBP25.57■■□□□ 1.68
SPEG-221ENST00000491248 PRKRIP1Q9H875 184 aaPredicted RBP25.57■■□□□ 1.68
SPEG-221ENST00000491248 ANKRD31Q8N7Z5 1873 aa25.56■■□□□ 1.68
SPEG-221ENST00000491248 POLRMTO00411 1230 aaKnown RBP25.56■■□□□ 1.68
SPEG-221ENST00000491248 A1BGP04217 495 aa25.56■■□□□ 1.68
SPEG-221ENST00000491248 BCL2L12Q9HB09 334 aa25.56■■□□□ 1.68
SPEG-221ENST00000491248 MIS18AQ9NYP9 233 aa25.56■■□□□ 1.68
SPEG-221ENST00000491248 A0A087WZG4 1122 aa25.55■■□□□ 1.68
SPEG-221ENST00000491248 SNRPA1P09661 255 aaKnown RBP25.55■■□□□ 1.68
SPEG-221ENST00000491248 TM4SF1P30408 202 aa25.55■■□□□ 1.68
SPEG-221ENST00000491248 IL6STP40189 918 aaPredicted RBP25.55■■□□□ 1.68
SPEG-221ENST00000491248 TGFB2P61812 414 aa25.55■■□□□ 1.68
SPEG-221ENST00000491248 USP16Q9Y5T5 823 aa25.55■■□□□ 1.68
SPEG-221ENST00000491248 A0A0G2JLW4 131 aa25.54■■□□□ 1.68
SPEG-221ENST00000491248 NFIXQ14938 502 aa25.54■■□□□ 1.68
SPEG-221ENST00000491248 PIP4K2AP48426 406 aaPredicted RBP25.53■■□□□ 1.68
SPEG-221ENST00000491248 WDR43Q15061 677 aaKnown RBP eCLIP25.53■■□□□ 1.68
SPEG-221ENST00000491248 ZNF784Q8NCA9 323 aaPredicted RBP25.53■■□□□ 1.68
SPEG-221ENST00000491248 DPEP1P16444 411 aa25.52■■□□□ 1.68
SPEG-221ENST00000491248 CCDC146Q8IYE0 955 aa25.52■■□□□ 1.68
SPEG-221ENST00000491248 TBC1D2BQ9UPU7 963 aa25.52■■□□□ 1.68
SPEG-221ENST00000491248 CACNA1SQ13698 1873 aa25.51■■□□□ 1.67
SPEG-221ENST00000491248 NPM2Q86SE8 214 aaKnown RBP25.51■■□□□ 1.67
SPEG-221ENST00000491248 PNISRQ8TF01 805 aaKnown RBP25.51■■□□□ 1.67
SPEG-221ENST00000491248 RIPK4P57078 832 aa25.5■■□□□ 1.67
SPEG-221ENST00000491248 COL11A2P13942 1736 aaPredicted RBP25.49■■□□□ 1.67
SPEG-221ENST00000491248 TMPOP42166 694 aaKnown RBP25.49■■□□□ 1.67
SPEG-221ENST00000491248 BICDL1Q6ZP65 573 aa25.49■■□□□ 1.67
SPEG-221ENST00000491248 BCS1LQ9Y276 419 aa25.49■■□□□ 1.67
SPEG-221ENST00000491248 NUP98P52948 1817 aa25.49■■□□□ 1.67
SPEG-221ENST00000491248 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
SPEG-221ENST00000491248 SERPINB2P05120 415 aa25.47■■□□□ 1.67
SPEG-221ENST00000491248 TBC1D9BQ66K14 1250 aa25.47■■□□□ 1.67
SPEG-221ENST00000491248 DZIP3Q86Y13 1208 aaKnown RBP25.47■■□□□ 1.67
SPEG-221ENST00000491248 CARMIL3Q8ND23 1372 aa25.46■■□□□ 1.67
SPEG-221ENST00000491248 CAMTA2O94983 1202 aa25.46■■□□□ 1.67
SPEG-221ENST00000491248 LMOD3Q0VAK6 560 aa25.46■■□□□ 1.67
SPEG-221ENST00000491248 KCNA3P22001 575 aa25.45■■□□□ 1.66
SPEG-221ENST00000491248 CHRNA5P30532 468 aa25.45■■□□□ 1.66
SPEG-221ENST00000491248 EIF4A1P60842 406 aaKnown RBP25.45■■□□□ 1.66
SPEG-221ENST00000491248 RUNDC1Q96C34 613 aa25.45■■□□□ 1.66
SPEG-221ENST00000491248 ADAMTS8Q9UP79 889 aa25.45■■□□□ 1.66
SPEG-221ENST00000491248 NBPF26B4DH59 902 aa25.44■■□□□ 1.66
SPEG-221ENST00000491248 NEUROD2Q15784 382 aa25.44■■□□□ 1.66
SPEG-221ENST00000491248 NBPF10Q6P3W6 841 aaKnown RBP25.44■■□□□ 1.66
SPEG-221ENST00000491248 NBPF15Q8N660 670 aa25.44■■□□□ 1.66
SPEG-221ENST00000491248 SBF1O95248 1867 aa25.43■■□□□ 1.66
SPEG-221ENST00000491248 GIGYF1O75420 1035 aaPredicted RBP25.43■■□□□ 1.66
SPEG-221ENST00000491248 TSPYL4Q9UJ04 414 aa25.43■■□□□ 1.66
SPEG-221ENST00000491248 PIM2Q9P1W9 311 aa25.42■■□□□ 1.66
SPEG-221ENST00000491248 CCDC88AQ3V6T2 1871 aa25.41■■□□□ 1.66
SPEG-221ENST00000491248 ATP10DQ9P241 1426 aa25.41■■□□□ 1.66
SPEG-221ENST00000491248 ADCY9O60503 1353 aa25.41■■□□□ 1.66
SPEG-221ENST00000491248 ARFGEF2Q9Y6D5 1785 aa25.41■■□□□ 1.66
SPEG-221ENST00000491248 ZNF316A6NFI3 1004 aaPredicted RBP25.4■■□□□ 1.66
SPEG-221ENST00000491248 DALRD3Q5D0E6 543 aaKnown RBP25.38■■□□□ 1.65
SPEG-221ENST00000491248 SETDB2Q96T68 719 aa25.38■■□□□ 1.65
SPEG-221ENST00000491248 ANKRD36CQ5JPF3 1778 aa25.37■■□□□ 1.65
SPEG-221ENST00000491248 TRIM35Q9UPQ4 493 aa25.37■■□□□ 1.65
SPEG-221ENST00000491248 ZNF652Q9Y2D9 606 aa25.37■■□□□ 1.65
SPEG-221ENST00000491248 PRR5LQ6MZQ0 368 aa25.36■■□□□ 1.65
SPEG-221ENST00000491248 ARHGAP27Q6ZUM4 889 aa25.36■■□□□ 1.65
SPEG-221ENST00000491248 CCDC24Q8N4L8 307 aa25.36■■□□□ 1.65
SPEG-221ENST00000491248 NPHP1O15259 732 aa25.35■■□□□ 1.65
SPEG-221ENST00000491248 CLEC4GQ6UXB4 293 aa25.35■■□□□ 1.65
SPEG-221ENST00000491248 C2CD5Q86YS7 1000 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms