RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 ATP7BP35670 1465 aa13.43□□□□□ -0.26
VPS72-205ENST00000491094 ADCY5O95622 1261 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 LTKP29376 864 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 SIL1Q9H173 461 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
VPS72-205ENST00000491094 DNM1Q05193 864 aaKnown RBP13.42□□□□□ -0.26
VPS72-205ENST00000491094 STK3Q13188 491 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 KIF24Q5T7B8 1368 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 KIAA0232Q92628 1395 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 SYT1P21579 422 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 FOSBP53539 338 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 LGR6Q9HBX8 967 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
VPS72-205ENST00000491094 PHF14O94880 888 aa13.41□□□□□ -0.26
VPS72-205ENST00000491094 SNX14Q9Y5W7 946 aa13.41□□□□□ -0.26
VPS72-205ENST00000491094 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
VPS72-205ENST00000491094 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
VPS72-205ENST00000491094 CNTROBQ8N137 903 aa13.41□□□□□ -0.26
VPS72-205ENST00000491094 STX6O43752 255 aa13.41□□□□□ -0.26
VPS72-205ENST00000491094 CUL4AQ13619 759 aa13.41□□□□□ -0.26
VPS72-205ENST00000491094 MPRIPQ6WCQ1 1025 aa13.41□□□□□ -0.26
VPS72-205ENST00000491094 SOS1Q07889 1333 aaPredicted RBP13.41□□□□□ -0.26
VPS72-205ENST00000491094 PPFIA3O75145 1194 aa13.4□□□□□ -0.26
VPS72-205ENST00000491094 LARGE1O95461 756 aa13.4□□□□□ -0.26
VPS72-205ENST00000491094 TEFQ10587 303 aa13.4□□□□□ -0.26
VPS72-205ENST00000491094 CCDC8Q9H0W5 538 aaPredicted RBP13.4□□□□□ -0.26
VPS72-205ENST00000491094 A2ML1A8K2U0 1454 aa13.4□□□□□ -0.26
VPS72-205ENST00000491094 IFIT2P09913 472 aaKnown RBP13.4□□□□□ -0.26
VPS72-205ENST00000491094 CSPP1Q1MSJ5 1256 aa13.4□□□□□ -0.26
VPS72-205ENST00000491094 TFIP11Q9UBB9 837 aaKnown RBP13.4□□□□□ -0.26
VPS72-205ENST00000491094 GJB2P29033 226 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 DRC7Q8IY82 874 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 ZNF500O60304 480 aaPredicted RBP13.39□□□□□ -0.27
VPS72-205ENST00000491094 ZSCAN22P10073 491 aaPredicted RBP13.39□□□□□ -0.27
VPS72-205ENST00000491094 LIMCH1Q9UPQ0 1083 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 NEO1Q92859 1461 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 PTH1RQ03431 593 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 CLASRPQ8N2M8 674 aaKnown RBP13.39□□□□□ -0.27
VPS72-205ENST00000491094 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
VPS72-205ENST00000491094 NAP1L2Q9ULW6 460 aaPredicted RBP13.39□□□□□ -0.27
VPS72-205ENST00000491094 CRB1P82279 1406 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 HSPA4P34932 840 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 INTS4Q96HW7 963 aaKnown RBP13.38□□□□□ -0.27
VPS72-205ENST00000491094 PDRG1Q9NUG6 133 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 EID1Q9Y6B2 187 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 TMEM131LA2VDJ0 1609 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 ANAPC15P60006 121 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 CWF19L2Q2TBE0 894 aaKnown RBP13.38□□□□□ -0.27
VPS72-205ENST00000491094 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 SGSM2O43147 1006 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 HS1BP3Q53T59 392 aa13.38□□□□□ -0.27
VPS72-205ENST00000491094 AACSQ86V21 672 aa13.37□□□□□ -0.27
VPS72-205ENST00000491094 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.37□□□□□ -0.27
VPS72-205ENST00000491094 CEBPZQ03701 1054 aaKnown RBP13.37□□□□□ -0.27
VPS72-205ENST00000491094 CCDC183Q5T5S1 534 aa13.37□□□□□ -0.27
VPS72-205ENST00000491094 BOLA2Q9H3K6 86 aa13.37□□□□□ -0.27
VPS72-205ENST00000491094 DNAAF4Q8WXU2 420 aa13.37□□□□□ -0.27
VPS72-205ENST00000491094 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
VPS72-205ENST00000491094 LARP1BQ659C4 914 aaKnown RBP13.36□□□□□ -0.27
VPS72-205ENST00000491094 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
VPS72-205ENST00000491094 SASS6Q6UVJ0 657 aa13.36□□□□□ -0.27
VPS72-205ENST00000491094 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
VPS72-205ENST00000491094 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
VPS72-205ENST00000491094 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
VPS72-205ENST00000491094 F13A1P00488 732 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 HOXC9P31274 260 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 SSH3Q8TE77 659 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 STAP2Q9UGK3 403 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 CYP46A1Q9Y6A2 500 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 FAM227BQ96M60 508 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 SALL3Q9BXA9 1300 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
VPS72-205ENST00000491094 FGD1P98174 961 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 COL9A3Q14050 684 aaPredicted RBP13.35□□□□□ -0.27
VPS72-205ENST00000491094 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
VPS72-205ENST00000491094 FLT4P35916 1363 aa13.34□□□□□ -0.27
VPS72-205ENST00000491094 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
VPS72-205ENST00000491094 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
VPS72-205ENST00000491094 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
VPS72-205ENST00000491094 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
VPS72-205ENST00000491094 ZNF530Q6P9A1 599 aaPredicted RBP13.34□□□□□ -0.27
VPS72-205ENST00000491094 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
VPS72-205ENST00000491094 LSG1Q9H089 658 aaKnown RBP13.34□□□□□ -0.27
VPS72-205ENST00000491094 MAP3K2Q9Y2U5 619 aa13.34□□□□□ -0.27
VPS72-205ENST00000491094 ATP6V1DQ9Y5K8 247 aa13.34□□□□□ -0.27
VPS72-205ENST00000491094 RAD50Q92878 1312 aa13.34□□□□□ -0.27
VPS72-205ENST00000491094 UBE2HP62256 183 aa13.33□□□□□ -0.27
VPS72-205ENST00000491094 RUFY2Q8WXA3 655 aa13.33□□□□□ -0.28
VPS72-205ENST00000491094 FSD1Q9BTV5 496 aa13.33□□□□□ -0.28
VPS72-205ENST00000491094 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.28
VPS72-205ENST00000491094 MYL6BP14649 208 aa13.33□□□□□ -0.28
VPS72-205ENST00000491094 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
VPS72-205ENST00000491094 CBX1P83916 185 aa13.32□□□□□ -0.28
VPS72-205ENST00000491094 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms