RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
HDAC3-210ENST00000490808 CABP4P57796 275 aa13.02□□□□□ -0.33
HDAC3-210ENST00000490808 MVPQ14764 893 aaKnown RBP13.02□□□□□ -0.33
HDAC3-210ENST00000490808 ACSBG1Q96GR2 724 aa13.02□□□□□ -0.33
HDAC3-210ENST00000490808 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
HDAC3-210ENST00000490808 NOB1Q9ULX3 412 aaKnown RBP13.02□□□□□ -0.33
HDAC3-210ENST00000490808 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
HDAC3-210ENST00000490808 CASZ1Q86V15 1759 aa13.02□□□□□ -0.33
HDAC3-210ENST00000490808 CHD4Q14839 1912 aa13.01□□□□□ -0.33
HDAC3-210ENST00000490808 C1QTNF8P60827 252 aa13.01□□□□□ -0.33
HDAC3-210ENST00000490808 TEFQ10587 303 aa13.01□□□□□ -0.33
HDAC3-210ENST00000490808 MPRIPQ6WCQ1 1025 aa13.01□□□□□ -0.33
HDAC3-210ENST00000490808 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
HDAC3-210ENST00000490808 CACNA1FO60840 1977 aa13□□□□□ -0.33
HDAC3-210ENST00000490808 TCERG1O14776 1098 aaKnown RBP13□□□□□ -0.33
HDAC3-210ENST00000490808 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
HDAC3-210ENST00000490808 PANK1Q8TE04 598 aa13□□□□□ -0.33
HDAC3-210ENST00000490808 PIGBQ92521 554 aa13□□□□□ -0.33
HDAC3-210ENST00000490808 STK31Q9BXU1 1019 aa13□□□□□ -0.33
HDAC3-210ENST00000490808 RWDD1Q9H446 243 aaPredicted RBP13□□□□□ -0.33
HDAC3-210ENST00000490808 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
HDAC3-210ENST00000490808 PTPRCP08575 1304 aa12.99□□□□□ -0.33
HDAC3-210ENST00000490808 TRIM27P14373 513 aa12.99□□□□□ -0.33
HDAC3-210ENST00000490808 C8orf58Q8NAV2 365 aa12.99□□□□□ -0.33
HDAC3-210ENST00000490808 PALLDQ8WX93 1383 aa12.98□□□□□ -0.33
HDAC3-210ENST00000490808 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
HDAC3-210ENST00000490808 ELL2O00472 640 aaPredicted RBP12.98□□□□□ -0.33
HDAC3-210ENST00000490808 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
HDAC3-210ENST00000490808 TXNRD1Q16881 649 aa12.98□□□□□ -0.33
HDAC3-210ENST00000490808 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
HDAC3-210ENST00000490808 ITPRIPQ8IWB1 547 aa12.98□□□□□ -0.33
HDAC3-210ENST00000490808 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
HDAC3-210ENST00000490808 HOXB7P09629 217 aa12.97□□□□□ -0.33
HDAC3-210ENST00000490808 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
HDAC3-210ENST00000490808 TSPYL6Q8N831 410 aa12.97□□□□□ -0.33
HDAC3-210ENST00000490808 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
HDAC3-210ENST00000490808 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
HDAC3-210ENST00000490808 PDGFDQ9GZP0 370 aaPredicted RBP12.97□□□□□ -0.33
HDAC3-210ENST00000490808 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
HDAC3-210ENST00000490808 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
HDAC3-210ENST00000490808 QSER1Q2KHR3 1735 aa12.96□□□□□ -0.33
HDAC3-210ENST00000490808 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
HDAC3-210ENST00000490808 LGR6Q9HBX8 967 aa12.96□□□□□ -0.33
HDAC3-210ENST00000490808 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
HDAC3-210ENST00000490808 SYT17Q9BSW7 474 aa12.95□□□□□ -0.34
HDAC3-210ENST00000490808 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
HDAC3-210ENST00000490808 FHDC1Q9C0D6 1143 aaPredicted RBP12.95□□□□□ -0.34
HDAC3-210ENST00000490808 ATG3Q9NT62 314 aa12.95□□□□□ -0.34
HDAC3-210ENST00000490808 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
HDAC3-210ENST00000490808 C5P01031 1676 aa12.95□□□□□ -0.34
HDAC3-210ENST00000490808 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
HDAC3-210ENST00000490808 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
HDAC3-210ENST00000490808 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
HDAC3-210ENST00000490808 RLBP1P12271 317 aa12.94□□□□□ -0.34
HDAC3-210ENST00000490808 PTGER2P43116 358 aa12.94□□□□□ -0.34
HDAC3-210ENST00000490808 SIK1P57059 783 aa12.94□□□□□ -0.34
HDAC3-210ENST00000490808 TSHZ2Q9NRE2 1034 aa12.94□□□□□ -0.34
HDAC3-210ENST00000490808 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
HDAC3-210ENST00000490808 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
HDAC3-210ENST00000490808 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
HDAC3-210ENST00000490808 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
HDAC3-210ENST00000490808 STK32BQ9NY57 414 aa12.93□□□□□ -0.34
HDAC3-210ENST00000490808 ASAP1Q9ULH1 1129 aa12.93□□□□□ -0.34
HDAC3-210ENST00000490808 UTRNP46939 3433 aa12.93□□□□□ -0.34
HDAC3-210ENST00000490808 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
HDAC3-210ENST00000490808 COL5A3P25940 1745 aaPredicted RBP12.92□□□□□ -0.34
HDAC3-210ENST00000490808 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
HDAC3-210ENST00000490808 PROM2Q8N271 834 aa12.92□□□□□ -0.34
HDAC3-210ENST00000490808 FMNL2Q96PY5 1086 aa12.92□□□□□ -0.34
HDAC3-210ENST00000490808 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
HDAC3-210ENST00000490808 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
HDAC3-210ENST00000490808 ABCC4O15439 1325 aa12.91□□□□□ -0.34
HDAC3-210ENST00000490808 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
HDAC3-210ENST00000490808 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
HDAC3-210ENST00000490808 CCT4P50991 539 aaKnown RBP12.9□□□□□ -0.34
HDAC3-210ENST00000490808 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
HDAC3-210ENST00000490808 SLC15A2Q16348 729 aa12.9□□□□□ -0.34
HDAC3-210ENST00000490808 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
HDAC3-210ENST00000490808 ZBTB40Q9NUA8 1239 aa12.9□□□□□ -0.34
HDAC3-210ENST00000490808 C4BP0C0L5 1744 aa12.9□□□□□ -0.34
HDAC3-210ENST00000490808 CNTNAP4Q9C0A0 1308 aa12.89□□□□□ -0.35
HDAC3-210ENST00000490808 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
HDAC3-210ENST00000490808 STARD3NLO95772 234 aa12.89□□□□□ -0.35
HDAC3-210ENST00000490808 ADRA2BP18089 450 aa12.89□□□□□ -0.35
HDAC3-210ENST00000490808 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
HDAC3-210ENST00000490808 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
HDAC3-210ENST00000490808 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
HDAC3-210ENST00000490808 MTFR1LQ9H019 292 aa12.89□□□□□ -0.35
HDAC3-210ENST00000490808 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
HDAC3-210ENST00000490808 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
HDAC3-210ENST00000490808 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
HDAC3-210ENST00000490808 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
HDAC3-210ENST00000490808 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
HDAC3-210ENST00000490808 TNNQ9UQP3 1299 aa12.88□□□□□ -0.35
HDAC3-210ENST00000490808 MYH14Q7Z406 1995 aaKnown RBP12.88□□□□□ -0.35
HDAC3-210ENST00000490808 ZBTB7BO15156 539 aaPredicted RBP12.87□□□□□ -0.35
HDAC3-210ENST00000490808 SNRPA1P09661 255 aaKnown RBP12.87□□□□□ -0.35
HDAC3-210ENST00000490808 SSFA2P28290 1259 aa12.87□□□□□ -0.35
HDAC3-210ENST00000490808 AK7Q96M32 723 aa12.87□□□□□ -0.35
HDAC3-210ENST00000490808 HDAC5Q9UQL6 1122 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms