RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CCDC30Q5VVM6 783 aa14.06□□□□□ -0.16
VARS2-210ENST00000490699 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
VARS2-210ENST00000490699 KCPQ6ZWJ8 1503 aa14.05□□□□□ -0.16
VARS2-210ENST00000490699 KCNQ3O43525 872 aa14.05□□□□□ -0.16
VARS2-210ENST00000490699 GIGYF1O75420 1035 aaPredicted RBP14.05□□□□□ -0.16
VARS2-210ENST00000490699 SLC27A3Q5K4L6 730 aa14.05□□□□□ -0.16
VARS2-210ENST00000490699 CCNL1Q9UK58 526 aaPredicted RBP14.05□□□□□ -0.16
VARS2-210ENST00000490699 EIF2S2P20042 333 aaKnown RBP14.04□□□□□ -0.16
VARS2-210ENST00000490699 C8orf58Q8NAV2 365 aa14.04□□□□□ -0.16
VARS2-210ENST00000490699 TNS1Q9HBL0 1735 aaKnown RBP14.04□□□□□ -0.16
VARS2-210ENST00000490699 PLSCR1O15162 318 aa14.03□□□□□ -0.16
VARS2-210ENST00000490699 CANXP27824 592 aaKnown RBP14.03□□□□□ -0.16
VARS2-210ENST00000490699 ALDH1L2Q3SY69 923 aa14.03□□□□□ -0.16
VARS2-210ENST00000490699 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.03□□□□□ -0.16
VARS2-210ENST00000490699 RCAN3Q9UKA8 241 aa14.03□□□□□ -0.16
VARS2-210ENST00000490699 ERBB4Q15303 1308 aa14.03□□□□□ -0.16
VARS2-210ENST00000490699 ZNF831Q5JPB2 1677 aa14.03□□□□□ -0.16
VARS2-210ENST00000490699 RGPD3A6NKT7 1758 aaPredicted RBP14.03□□□□□ -0.16
VARS2-210ENST00000490699 RGPD4Q7Z3J3 1758 aa14.03□□□□□ -0.16
VARS2-210ENST00000490699 LY75O60449 1722 aa14.02□□□□□ -0.16
VARS2-210ENST00000490699 SMC4Q9NTJ3 1288 aa14.02□□□□□ -0.17
VARS2-210ENST00000490699 DBF4Q9UBU7 674 aaPredicted RBP14.02□□□□□ -0.17
VARS2-210ENST00000490699 KIF16BQ96L93 1317 aa14.01□□□□□ -0.17
VARS2-210ENST00000490699 VAMP4O75379 141 aa14.01□□□□□ -0.17
VARS2-210ENST00000490699 KRT24Q2M2I5 525 aa14.01□□□□□ -0.17
VARS2-210ENST00000490699 TSPYL6Q8N831 410 aa14.01□□□□□ -0.17
VARS2-210ENST00000490699 C5P01031 1676 aa14.01□□□□□ -0.17
VARS2-210ENST00000490699 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
VARS2-210ENST00000490699 PTF1AQ7RTS3 328 aa14□□□□□ -0.17
VARS2-210ENST00000490699 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
VARS2-210ENST00000490699 NECTIN2Q92692 538 aa14□□□□□ -0.17
VARS2-210ENST00000490699 HYPKQ9NX55 129 aa14□□□□□ -0.17
VARS2-210ENST00000490699 TJP1Q07157 1748 aa13.99□□□□□ -0.17
VARS2-210ENST00000490699 IPO8O15397 1037 aaKnown RBP13.99□□□□□ -0.17
VARS2-210ENST00000490699 TXNRD1Q16881 649 aa13.99□□□□□ -0.17
VARS2-210ENST00000490699 AK7Q96M32 723 aa13.99□□□□□ -0.17
VARS2-210ENST00000490699 CCDC87Q9NVE4 849 aa13.99□□□□□ -0.17
VARS2-210ENST00000490699 CACNA1FO60840 1977 aa13.99□□□□□ -0.17
VARS2-210ENST00000490699 DDX58O95786 925 aaKnown RBP13.98□□□□□ -0.17
VARS2-210ENST00000490699 RARSP54136 660 aaKnown RBP13.98□□□□□ -0.17
VARS2-210ENST00000490699 DDX21Q9NR30 783 aaKnown RBP eCLIP13.98□□□□□ -0.17
VARS2-210ENST00000490699 ZNF330Q9Y3S2 320 aaPredicted RBP13.98□□□□□ -0.17
VARS2-210ENST00000490699 USP16Q9Y5T5 823 aa13.98□□□□□ -0.17
VARS2-210ENST00000490699 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
VARS2-210ENST00000490699 CYP19A1P11511 503 aaPredicted RBP13.97□□□□□ -0.17
VARS2-210ENST00000490699 MS4A1P11836 297 aa13.97□□□□□ -0.17
VARS2-210ENST00000490699 CRKLP46109 303 aaKnown RBP13.97□□□□□ -0.17
VARS2-210ENST00000490699 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
VARS2-210ENST00000490699 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
VARS2-210ENST00000490699 COL5A3P25940 1745 aaPredicted RBP13.96□□□□□ -0.17
VARS2-210ENST00000490699 A0A087WZG4 1122 aa13.96□□□□□ -0.17
VARS2-210ENST00000490699 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
VARS2-210ENST00000490699 MYL6BP14649 208 aa13.96□□□□□ -0.17
VARS2-210ENST00000490699 EN1Q05925 392 aaPredicted RBP13.96□□□□□ -0.17
VARS2-210ENST00000490699 ITPK1Q13572 414 aa13.96□□□□□ -0.17
VARS2-210ENST00000490699 RC3H1Q5TC82 1133 aaKnown RBP13.96□□□□□ -0.17
VARS2-210ENST00000490699 KIF6Q6ZMV9 814 aa13.96□□□□□ -0.17
VARS2-210ENST00000490699 SSH1Q8WYL5 1049 aa13.96□□□□□ -0.17
VARS2-210ENST00000490699 FRAT1Q92837 279 aaPredicted RBP13.96□□□□□ -0.17
VARS2-210ENST00000490699 ARXQ96QS3 562 aa13.96□□□□□ -0.17
VARS2-210ENST00000490699 BCL2L13Q9BXK5 485 aa13.96□□□□□ -0.17
VARS2-210ENST00000490699 PTPRCP08575 1304 aa13.95□□□□□ -0.18
VARS2-210ENST00000490699 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
VARS2-210ENST00000490699 IL6STP40189 918 aaPredicted RBP13.95□□□□□ -0.18
VARS2-210ENST00000490699 SLC4A9Q96Q91 983 aa13.95□□□□□ -0.18
VARS2-210ENST00000490699 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
VARS2-210ENST00000490699 C4BP0C0L5 1744 aa13.95□□□□□ -0.18
VARS2-210ENST00000490699 TAF1LQ8IZX4 1826 aa13.94□□□□□ -0.18
VARS2-210ENST00000490699 GNPATO15228 680 aa13.94□□□□□ -0.18
VARS2-210ENST00000490699 A1BGP04217 495 aa13.94□□□□□ -0.18
VARS2-210ENST00000490699 FKBP5Q13451 457 aaPredicted RBP13.94□□□□□ -0.18
VARS2-210ENST00000490699 NBPF14Q5TI25 921 aa13.94□□□□□ -0.18
VARS2-210ENST00000490699 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
VARS2-210ENST00000490699 API5Q9BZZ5 524 aaKnown RBP13.94□□□□□ -0.18
VARS2-210ENST00000490699 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
VARS2-210ENST00000490699 EP400Q96L91 3159 aa13.93□□□□□ -0.18
VARS2-210ENST00000490699 NEFLP07196 543 aa13.93□□□□□ -0.18
VARS2-210ENST00000490699 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
VARS2-210ENST00000490699 KCNQ4P56696 695 aa13.93□□□□□ -0.18
VARS2-210ENST00000490699 EZH2Q15910 746 aaKnown RBP13.93□□□□□ -0.18
VARS2-210ENST00000490699 ZKSCAN2Q63HK3 967 aa13.93□□□□□ -0.18
VARS2-210ENST00000490699 FTSJ3Q8IY81 847 aaKnown RBP13.93□□□□□ -0.18
VARS2-210ENST00000490699 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
VARS2-210ENST00000490699 UPF1Q92900 1129 aaKnown RBP eCLIP13.93□□□□□ -0.18
VARS2-210ENST00000490699 STK32BQ9NY57 414 aa13.93□□□□□ -0.18
VARS2-210ENST00000490699 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
VARS2-210ENST00000490699 AIMP1Q12904 312 aaKnown RBP13.92□□□□□ -0.18
VARS2-210ENST00000490699 FLIIQ13045 1269 aa13.92□□□□□ -0.18
VARS2-210ENST00000490699 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
VARS2-210ENST00000490699 CAMKK2Q96RR4 588 aa13.92□□□□□ -0.18
VARS2-210ENST00000490699 TFCP2L1Q9NZI6 479 aa13.92□□□□□ -0.18
VARS2-210ENST00000490699 RREB1Q92766 1687 aa13.91□□□□□ -0.18
VARS2-210ENST00000490699 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
VARS2-210ENST00000490699 BCAR3O75815 825 aa13.91□□□□□ -0.18
VARS2-210ENST00000490699 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
VARS2-210ENST00000490699 DEFB132Q7Z7B7 95 aa13.91□□□□□ -0.18
VARS2-210ENST00000490699 ARHGAP45Q92619 1136 aa13.91□□□□□ -0.18
VARS2-210ENST00000490699 LRRC4BQ9NT99 713 aa13.91□□□□□ -0.18
VARS2-210ENST00000490699 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
VARS2-210ENST00000490699 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms