RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 PARP3Q9Y6F1 533 aa17.4■□□□□ 0.38
SHC1-211ENST00000490667 USPL1Q5W0Q7 1092 aa17.39■□□□□ 0.37
SHC1-211ENST00000490667 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
SHC1-211ENST00000490667 RIPK4P57078 832 aa17.38■□□□□ 0.37
SHC1-211ENST00000490667 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
SHC1-211ENST00000490667 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
SHC1-211ENST00000490667 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
SHC1-211ENST00000490667 A0A087WZG4 1122 aa17.37■□□□□ 0.37
SHC1-211ENST00000490667 A1BGP04217 495 aa17.37■□□□□ 0.37
SHC1-211ENST00000490667 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
SHC1-211ENST00000490667 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
SHC1-211ENST00000490667 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
SHC1-211ENST00000490667 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
SHC1-211ENST00000490667 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
SHC1-211ENST00000490667 TJP1Q07157 1748 aa17.36■□□□□ 0.37
SHC1-211ENST00000490667 TM4SF1P30408 202 aa17.36■□□□□ 0.37
SHC1-211ENST00000490667 TMPOP42166 694 aaKnown RBP17.36■□□□□ 0.37
SHC1-211ENST00000490667 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
SHC1-211ENST00000490667 COL15A1P39059 1388 aa17.36■□□□□ 0.37
SHC1-211ENST00000490667 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
SHC1-211ENST00000490667 GRIN3BO60391 1043 aa17.35■□□□□ 0.37
SHC1-211ENST00000490667 YBX3P16989 372 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHC1-211ENST00000490667 IL6STP40189 918 aaPredicted RBP17.35■□□□□ 0.37
SHC1-211ENST00000490667 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
SHC1-211ENST00000490667 CICQ96RK0 1608 aaPredicted RBP17.35■□□□□ 0.37
SHC1-211ENST00000490667 TGFB2P61812 414 aa17.34■□□□□ 0.37
SHC1-211ENST00000490667 DDR1Q08345 913 aa17.34■□□□□ 0.37
SHC1-211ENST00000490667 MYH14Q7Z406 1995 aaKnown RBP17.34■□□□□ 0.37
SHC1-211ENST00000490667 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
SHC1-211ENST00000490667 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
SHC1-211ENST00000490667 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
SHC1-211ENST00000490667 NEUROD2Q15784 382 aa17.33■□□□□ 0.36
SHC1-211ENST00000490667 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
SHC1-211ENST00000490667 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
SHC1-211ENST00000490667 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
SHC1-211ENST00000490667 LMOD3Q0VAK6 560 aa17.32■□□□□ 0.36
SHC1-211ENST00000490667 NFIXQ14938 502 aa17.32■□□□□ 0.36
SHC1-211ENST00000490667 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
SHC1-211ENST00000490667 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
SHC1-211ENST00000490667 EIF4A1P60842 406 aaKnown RBP17.31■□□□□ 0.36
SHC1-211ENST00000490667 WWC3Q9ULE0 1092 aa17.31■□□□□ 0.36
SHC1-211ENST00000490667 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
SHC1-211ENST00000490667 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
SHC1-211ENST00000490667 DPEP1P16444 411 aa17.29■□□□□ 0.36
SHC1-211ENST00000490667 BICDL1Q6ZP65 573 aa17.29■□□□□ 0.36
SHC1-211ENST00000490667 TSPYL4Q9UJ04 414 aa17.29■□□□□ 0.36
SHC1-211ENST00000490667 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
SHC1-211ENST00000490667 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
SHC1-211ENST00000490667 SERPINB2P05120 415 aa17.28■□□□□ 0.36
SHC1-211ENST00000490667 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
SHC1-211ENST00000490667 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
SHC1-211ENST00000490667 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
SHC1-211ENST00000490667 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
SHC1-211ENST00000490667 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
SHC1-211ENST00000490667 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
SHC1-211ENST00000490667 TBC1D9BQ66K14 1250 aa17.27■□□□□ 0.36
SHC1-211ENST00000490667 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.36
SHC1-211ENST00000490667 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
SHC1-211ENST00000490667 ANP32CO43423 234 aa17.26■□□□□ 0.35
SHC1-211ENST00000490667 KCNA3P22001 575 aa17.26■□□□□ 0.35
SHC1-211ENST00000490667 CCDC184Q52MB2 194 aa17.26■□□□□ 0.35
SHC1-211ENST00000490667 PXDNLA1KZ92 1463 aa17.25■□□□□ 0.35
SHC1-211ENST00000490667 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
SHC1-211ENST00000490667 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
SHC1-211ENST00000490667 APAF1O14727 1248 aa17.24■□□□□ 0.35
SHC1-211ENST00000490667 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
SHC1-211ENST00000490667 PIM2Q9P1W9 311 aa17.24■□□□□ 0.35
SHC1-211ENST00000490667 CHL1O00533 1208 aa17.23■□□□□ 0.35
SHC1-211ENST00000490667 CHRNA5P30532 468 aa17.23■□□□□ 0.35
SHC1-211ENST00000490667 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
SHC1-211ENST00000490667 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
SHC1-211ENST00000490667 ZNF784Q8NCA9 323 aaPredicted RBP17.23■□□□□ 0.35
SHC1-211ENST00000490667 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
SHC1-211ENST00000490667 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
SHC1-211ENST00000490667 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
SHC1-211ENST00000490667 RGL2O15211 777 aa17.2■□□□□ 0.34
SHC1-211ENST00000490667 MYL6BP14649 208 aa17.2■□□□□ 0.34
SHC1-211ENST00000490667 EIF2S2P20042 333 aaKnown RBP17.2■□□□□ 0.34
SHC1-211ENST00000490667 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
SHC1-211ENST00000490667 HLFQ16534 295 aa17.19■□□□□ 0.34
SHC1-211ENST00000490667 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
SHC1-211ENST00000490667 ARHGAP27Q6ZUM4 889 aa17.19■□□□□ 0.34
SHC1-211ENST00000490667 CCDC24Q8N4L8 307 aa17.19■□□□□ 0.34
SHC1-211ENST00000490667 MRS2Q9HD23 443 aa17.19■□□□□ 0.34
SHC1-211ENST00000490667 H0YIN7 160 aa17.18■□□□□ 0.34
SHC1-211ENST00000490667 NPHP1O15259 732 aa17.18■□□□□ 0.34
SHC1-211ENST00000490667 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
SHC1-211ENST00000490667 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
SHC1-211ENST00000490667 CFAP44Q96MT7 982 aa17.18■□□□□ 0.34
SHC1-211ENST00000490667 BRIP1Q9BX63 1249 aa17.18■□□□□ 0.34
SHC1-211ENST00000490667 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
SHC1-211ENST00000490667 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
SHC1-211ENST00000490667 ERVV-1B6SEH8 477 aa17.17■□□□□ 0.34
SHC1-211ENST00000490667 PDE6BP35913 854 aa17.17■□□□□ 0.34
SHC1-211ENST00000490667 NBPF5PQ86XG9 351 aaPredicted RBP17.17■□□□□ 0.34
SHC1-211ENST00000490667 CNBD1Q8NA66 436 aa17.17■□□□□ 0.34
SHC1-211ENST00000490667 NIP7Q9Y221 180 aaKnown RBP eCLIP17.17■□□□□ 0.34
SHC1-211ENST00000490667 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
SHC1-211ENST00000490667 PDIA6Q15084 440 aa17.16■□□□□ 0.34
SHC1-211ENST00000490667 KRT24Q2M2I5 525 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms