RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
PCCB-218ENST00000490504 ZNF496Q96IT1 587 aaPredicted RBP20.45■□□□□ 0.86
PCCB-218ENST00000490504 TJP1Q07157 1748 aa20.44■□□□□ 0.86
PCCB-218ENST00000490504 MYH14Q7Z406 1995 aaKnown RBP20.44■□□□□ 0.86
PCCB-218ENST00000490504 MCM10Q7L590 875 aa20.43■□□□□ 0.86
PCCB-218ENST00000490504 KCNQ3O43525 872 aa20.42■□□□□ 0.86
PCCB-218ENST00000490504 DCTN1Q14203 1278 aa20.42■□□□□ 0.86
PCCB-218ENST00000490504 FKBP8Q14318 412 aa20.42■□□□□ 0.86
PCCB-218ENST00000490504 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
PCCB-218ENST00000490504 SOS1Q07889 1333 aaPredicted RBP20.42■□□□□ 0.86
PCCB-218ENST00000490504 USP42Q9H9J4 1324 aaKnown RBP20.42■□□□□ 0.86
PCCB-218ENST00000490504 APAF1O14727 1248 aa20.42■□□□□ 0.86
PCCB-218ENST00000490504 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
PCCB-218ENST00000490504 RUNDC1Q96C34 613 aa20.42■□□□□ 0.86
PCCB-218ENST00000490504 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
PCCB-218ENST00000490504 BTBD11A6QL63 1104 aa20.41■□□□□ 0.86
PCCB-218ENST00000490504 ZNF521Q96K83 1311 aa20.41■□□□□ 0.86
PCCB-218ENST00000490504 PLEKHF1Q96S99 279 aa20.4■□□□□ 0.86
PCCB-218ENST00000490504 HEG1Q9ULI3 1381 aa20.39■□□□□ 0.86
PCCB-218ENST00000490504 WWC3Q9ULE0 1092 aa20.39■□□□□ 0.86
PCCB-218ENST00000490504 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
PCCB-218ENST00000490504 STARD3NLO95772 234 aa20.38■□□□□ 0.85
PCCB-218ENST00000490504 CANXP27824 592 aaKnown RBP20.38■□□□□ 0.85
PCCB-218ENST00000490504 USPL1Q5W0Q7 1092 aa20.38■□□□□ 0.85
PCCB-218ENST00000490504 FMNL2Q96PY5 1086 aa20.38■□□□□ 0.85
PCCB-218ENST00000490504 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
PCCB-218ENST00000490504 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
PCCB-218ENST00000490504 ZPR1O75312 459 aa20.38■□□□□ 0.85
PCCB-218ENST00000490504 CDCA7LQ96GN5 454 aa20.37■□□□□ 0.85
PCCB-218ENST00000490504 COL15A1P39059 1388 aa20.36■□□□□ 0.85
PCCB-218ENST00000490504 NEFMP07197 916 aa20.36■□□□□ 0.85
PCCB-218ENST00000490504 DDR1Q08345 913 aa20.36■□□□□ 0.85
PCCB-218ENST00000490504 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
PCCB-218ENST00000490504 NARFQ9UHQ1 456 aa20.36■□□□□ 0.85
PCCB-218ENST00000490504 VIRMAQ69YN4 1812 aaKnown RBP20.36■□□□□ 0.85
PCCB-218ENST00000490504 UBR2Q8IWV8 1755 aa20.35■□□□□ 0.85
PCCB-218ENST00000490504 TM4SF1P30408 202 aa20.35■□□□□ 0.85
PCCB-218ENST00000490504 EIF5P55010 431 aaKnown RBP20.35■□□□□ 0.85
PCCB-218ENST00000490504 GOLGA2Q08379 1002 aa20.35■□□□□ 0.85
PCCB-218ENST00000490504 ZNF784Q8NCA9 323 aaPredicted RBP20.35■□□□□ 0.85
PCCB-218ENST00000490504 C4AP0C0L4 1744 aa20.34■□□□□ 0.85
PCCB-218ENST00000490504 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
PCCB-218ENST00000490504 NFE2L2Q16236 605 aa20.34■□□□□ 0.85
PCCB-218ENST00000490504 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
PCCB-218ENST00000490504 BCL2L12Q9HB09 334 aa20.34■□□□□ 0.85
PCCB-218ENST00000490504 A0A0G2JLW4 131 aa20.33■□□□□ 0.84
PCCB-218ENST00000490504 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.84
PCCB-218ENST00000490504 A1BGP04217 495 aa20.33■□□□□ 0.84
PCCB-218ENST00000490504 TGFB2P61812 414 aa20.33■□□□□ 0.84
PCCB-218ENST00000490504 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.84
PCCB-218ENST00000490504 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.84
PCCB-218ENST00000490504 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.84
PCCB-218ENST00000490504 USP16Q9Y5T5 823 aa20.33■□□□□ 0.84
PCCB-218ENST00000490504 SIPA1L3O60292 1781 aaPredicted RBP20.33■□□□□ 0.84
PCCB-218ENST00000490504 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
PCCB-218ENST00000490504 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
PCCB-218ENST00000490504 PXDNLA1KZ92 1463 aa20.32■□□□□ 0.84
PCCB-218ENST00000490504 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
PCCB-218ENST00000490504 MAPK8IP3Q9UPT6 1336 aa20.31■□□□□ 0.84
PCCB-218ENST00000490504 DPEP1P16444 411 aa20.31■□□□□ 0.84
PCCB-218ENST00000490504 NFIXQ14938 502 aa20.31■□□□□ 0.84
PCCB-218ENST00000490504 ZNF330Q9Y3S2 320 aaPredicted RBP20.31■□□□□ 0.84
PCCB-218ENST00000490504 A0A087WZG4 1122 aa20.3■□□□□ 0.84
PCCB-218ENST00000490504 SNRPA1P09661 255 aaKnown RBP20.29■□□□□ 0.84
PCCB-218ENST00000490504 IL6STP40189 918 aaPredicted RBP20.29■□□□□ 0.84
PCCB-218ENST00000490504 SLFN5Q08AF3 891 aa20.29■□□□□ 0.84
PCCB-218ENST00000490504 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
PCCB-218ENST00000490504 ERICH6BQ5W0A0 696 aa20.29■□□□□ 0.84
PCCB-218ENST00000490504 TBC1D2BQ9UPU7 963 aa20.29■□□□□ 0.84
PCCB-218ENST00000490504 PIP4K2AP48426 406 aaPredicted RBP20.28■□□□□ 0.84
PCCB-218ENST00000490504 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
PCCB-218ENST00000490504 RCAN3Q9UKA8 241 aa20.28■□□□□ 0.84
PCCB-218ENST00000490504 E9PSI1 815 aa20.27■□□□□ 0.84
PCCB-218ENST00000490504 KCNA3P22001 575 aa20.27■□□□□ 0.84
PCCB-218ENST00000490504 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
PCCB-218ENST00000490504 TRMT2AQ8IZ69 625 aaKnown RBP20.27■□□□□ 0.83
PCCB-218ENST00000490504 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
PCCB-218ENST00000490504 BICDL1Q6ZP65 573 aa20.26■□□□□ 0.83
PCCB-218ENST00000490504 BCS1LQ9Y276 419 aa20.26■□□□□ 0.83
PCCB-218ENST00000490504 RRP7AQ9Y3A4 280 aaKnown RBP20.26■□□□□ 0.83
PCCB-218ENST00000490504 SERPINB2P05120 415 aa20.25■□□□□ 0.83
PCCB-218ENST00000490504 RIPK4P57078 832 aa20.25■□□□□ 0.83
PCCB-218ENST00000490504 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
PCCB-218ENST00000490504 TBC1D9BQ66K14 1250 aa20.24■□□□□ 0.83
PCCB-218ENST00000490504 NBPF26B4DH59 902 aa20.24■□□□□ 0.83
PCCB-218ENST00000490504 CAMTA2O94983 1202 aa20.24■□□□□ 0.83
PCCB-218ENST00000490504 CHRNA5P30532 468 aa20.24■□□□□ 0.83
PCCB-218ENST00000490504 TMPOP42166 694 aaKnown RBP20.24■□□□□ 0.83
PCCB-218ENST00000490504 NBPF10Q6P3W6 841 aaKnown RBP20.24■□□□□ 0.83
PCCB-218ENST00000490504 NPM2Q86SE8 214 aaKnown RBP20.24■□□□□ 0.83
PCCB-218ENST00000490504 WDR63Q8IWG1 891 aa20.24■□□□□ 0.83
PCCB-218ENST00000490504 NBPF15Q8N660 670 aa20.24■□□□□ 0.83
PCCB-218ENST00000490504 KIF13BQ9NQT8 1826 aa20.23■□□□□ 0.83
PCCB-218ENST00000490504 CHD4Q14839 1912 aa20.23■□□□□ 0.83
PCCB-218ENST00000490504 KIAA1551Q9HCM1 1747 aa20.23■□□□□ 0.83
PCCB-218ENST00000490504 EIF4A1P60842 406 aaKnown RBP20.23■□□□□ 0.83
PCCB-218ENST00000490504 DZIP3Q86Y13 1208 aaKnown RBP20.22■□□□□ 0.83
PCCB-218ENST00000490504 GIGYF1O75420 1035 aaPredicted RBP20.21■□□□□ 0.83
PCCB-218ENST00000490504 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
PCCB-218ENST00000490504 PIM2Q9P1W9 311 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms