RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 DCAF11Q8TEB1 546 aa10.48□□□□□ -0.73
PDLIM1-203ENST00000490391 NLRP2Q9NX02 1062 aa10.48□□□□□ -0.73
PDLIM1-203ENST00000490391 TAF1LQ8IZX4 1826 aa10.48□□□□□ -0.73
PDLIM1-203ENST00000490391 TTC21BQ7Z4L5 1316 aa10.48□□□□□ -0.73
PDLIM1-203ENST00000490391 C10orf71Q711Q0 1435 aa10.48□□□□□ -0.73
PDLIM1-203ENST00000490391 AMIGO3Q86WK7 504 aa10.47□□□□□ -0.73
PDLIM1-203ENST00000490391 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
PDLIM1-203ENST00000490391 STK24Q9Y6E0 443 aa10.47□□□□□ -0.73
PDLIM1-203ENST00000490391 THSD4Q6ZMP0 1018 aa10.46□□□□□ -0.73
PDLIM1-203ENST00000490391 SYTL4Q96C24 671 aaPredicted RBP10.46□□□□□ -0.73
PDLIM1-203ENST00000490391 KCNK17Q96T54 332 aa10.46□□□□□ -0.73
PDLIM1-203ENST00000490391 PXDNLA1KZ92 1463 aa10.46□□□□□ -0.74
PDLIM1-203ENST00000490391 LTN1O94822 1766 aa10.46□□□□□ -0.74
PDLIM1-203ENST00000490391 KIF13BQ9NQT8 1826 aa10.46□□□□□ -0.74
PDLIM1-203ENST00000490391 UBR3Q6ZT12 1888 aa10.45□□□□□ -0.74
PDLIM1-203ENST00000490391 KIAA1210Q9ULL0 1709 aa10.45□□□□□ -0.74
PDLIM1-203ENST00000490391 FLAD1Q8NFF5 587 aa10.45□□□□□ -0.74
PDLIM1-203ENST00000490391 DDX54Q8TDD1 881 aaKnown RBP10.45□□□□□ -0.74
PDLIM1-203ENST00000490391 TNRC18O15417 2968 aaPredicted RBP10.44□□□□□ -0.74
PDLIM1-203ENST00000490391 PKD1L3Q7Z443 1732 aa10.44□□□□□ -0.74
PDLIM1-203ENST00000490391 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
PDLIM1-203ENST00000490391 TTC21AQ8NDW8 1320 aa10.44□□□□□ -0.74
PDLIM1-203ENST00000490391 ANKRD24Q8TF21 1146 aa10.44□□□□□ -0.74
PDLIM1-203ENST00000490391 BRCA1P38398 1863 aaKnown RBP10.44□□□□□ -0.74
PDLIM1-203ENST00000490391 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
PDLIM1-203ENST00000490391 PLEKHG2Q9H7P9 1386 aa10.43□□□□□ -0.74
PDLIM1-203ENST00000490391 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
PDLIM1-203ENST00000490391 Q6ZNB5 142 aa10.43□□□□□ -0.74
PDLIM1-203ENST00000490391 C16orf71Q8IYS4 520 aaPredicted RBP10.43□□□□□ -0.74
PDLIM1-203ENST00000490391 N4BP2Q86UW6 1770 aaPredicted RBP10.43□□□□□ -0.74
PDLIM1-203ENST00000490391 TNRC6CQ9HCJ0 1690 aaKnown RBP10.43□□□□□ -0.74
PDLIM1-203ENST00000490391 USP31Q70CQ4 1352 aa10.42□□□□□ -0.74
PDLIM1-203ENST00000490391 USP47Q96K76 1375 aa10.42□□□□□ -0.74
PDLIM1-203ENST00000490391 FAM208AQ9UK61 1670 aaKnown RBP10.42□□□□□ -0.74
PDLIM1-203ENST00000490391 SLC4A5Q9BY07 1137 aa10.42□□□□□ -0.74
PDLIM1-203ENST00000490391 PDE4DIPQ5VU43 2346 aa10.42□□□□□ -0.74
PDLIM1-203ENST00000490391 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
PDLIM1-203ENST00000490391 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
PDLIM1-203ENST00000490391 C9orf131Q5VYM1 1079 aa10.41□□□□□ -0.74
PDLIM1-203ENST00000490391 SMIM5Q71RC9 77 aa10.41□□□□□ -0.74
PDLIM1-203ENST00000490391 MON2Q7Z3U7 1717 aa10.41□□□□□ -0.74
PDLIM1-203ENST00000490391 ARFGEF1Q9Y6D6 1849 aa10.4□□□□□ -0.74
PDLIM1-203ENST00000490391 FAM161AQ3B820 660 aa10.4□□□□□ -0.74
PDLIM1-203ENST00000490391 ARHGAP27Q6ZUM4 889 aa10.4□□□□□ -0.74
PDLIM1-203ENST00000490391 SMC1BQ8NDV3 1235 aa10.4□□□□□ -0.74
PDLIM1-203ENST00000490391 BCS1LQ9Y276 419 aa10.4□□□□□ -0.74
PDLIM1-203ENST00000490391 MEGF6O75095 1541 aa10.39□□□□□ -0.75
PDLIM1-203ENST00000490391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.39□□□□□ -0.75
PDLIM1-203ENST00000490391 RRAGCQ9HB90 399 aa10.39□□□□□ -0.75
PDLIM1-203ENST00000490391 KDM2BQ8NHM5 1336 aa10.38□□□□□ -0.75
PDLIM1-203ENST00000490391 TBC1D12O60347 775 aa10.38□□□□□ -0.75
PDLIM1-203ENST00000490391 SBF1O95248 1867 aa10.38□□□□□ -0.75
PDLIM1-203ENST00000490391 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
PDLIM1-203ENST00000490391 MAP2P11137 1827 aaKnown RBP10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 A0A0G2JLW4 131 aa10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 TGFB2P61812 414 aa10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 FOXK1P85037 733 aa10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 WNT2BQ93097 391 aa10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 NSD3Q9BZ95 1437 aa10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 PRDM10Q9NQV6 1147 aa10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 RGPD2P0DJD1 1756 aa10.37□□□□□ -0.75
PDLIM1-203ENST00000490391 GOLGA8CPA6NN73 597 aa10.36□□□□□ -0.75
PDLIM1-203ENST00000490391 STK25O00506 426 aa10.36□□□□□ -0.75
PDLIM1-203ENST00000490391 FOXN1O15353 648 aa10.36□□□□□ -0.75
PDLIM1-203ENST00000490391 PHF14O94880 888 aa10.36□□□□□ -0.75
PDLIM1-203ENST00000490391 MMP10P09238 476 aa10.36□□□□□ -0.75
PDLIM1-203ENST00000490391 SSFA2P28290 1259 aa10.36□□□□□ -0.75
PDLIM1-203ENST00000490391 ZCRB1Q8TBF4 217 aaKnown RBP10.36□□□□□ -0.75
PDLIM1-203ENST00000490391 AK7Q96M32 723 aa10.36□□□□□ -0.75
PDLIM1-203ENST00000490391 FCHSD2O94868 740 aa10.35□□□□□ -0.75
PDLIM1-203ENST00000490391 DPEP1P16444 411 aa10.35□□□□□ -0.75
PDLIM1-203ENST00000490391 KCNA3P22001 575 aa10.35□□□□□ -0.75
PDLIM1-203ENST00000490391 HMGB2P26583 209 aaKnown RBP10.35□□□□□ -0.75
PDLIM1-203ENST00000490391 NME9Q86XW9 330 aa10.35□□□□□ -0.75
PDLIM1-203ENST00000490391 PLPP6Q8IY26 295 aa10.35□□□□□ -0.75
PDLIM1-203ENST00000490391 SBNO2Q9Y2G9 1366 aa10.35□□□□□ -0.75
PDLIM1-203ENST00000490391 IP6K1Q92551 441 aa10.34□□□□□ -0.75
PDLIM1-203ENST00000490391 RNF181Q9P0P0 153 aa10.34□□□□□ -0.75
PDLIM1-203ENST00000490391 CD163L1Q9NR16 1453 aa10.34□□□□□ -0.75
PDLIM1-203ENST00000490391 EVC2Q86UK5 1308 aa10.33□□□□□ -0.76
PDLIM1-203ENST00000490391 ITGB4P16144 1822 aa10.33□□□□□ -0.76
PDLIM1-203ENST00000490391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDLIM1-203ENST00000490391 DCAF5Q96JK2 942 aa10.33□□□□□ -0.76
PDLIM1-203ENST00000490391 BCL2L12Q9HB09 334 aa10.33□□□□□ -0.76
PDLIM1-203ENST00000490391 C4AP0C0L4 1744 aa10.33□□□□□ -0.76
PDLIM1-203ENST00000490391 KDM6AO15550 1401 aaPredicted RBP10.33□□□□□ -0.76
PDLIM1-203ENST00000490391 PPP1R37O75864 691 aa10.32□□□□□ -0.76
PDLIM1-203ENST00000490391 RGS19P49795 217 aa10.32□□□□□ -0.76
PDLIM1-203ENST00000490391 MRPL50Q8N5N7 158 aaKnown RBP10.32□□□□□ -0.76
PDLIM1-203ENST00000490391 LINC00116Q8NCU8 138 aa10.32□□□□□ -0.76
PDLIM1-203ENST00000490391 LTV1Q96GA3 475 aaPredicted RBP10.32□□□□□ -0.76
PDLIM1-203ENST00000490391 ABHD8Q96I13 439 aa10.32□□□□□ -0.76
PDLIM1-203ENST00000490391 ITGBL1O95965 494 aaPredicted RBP10.31□□□□□ -0.76
PDLIM1-203ENST00000490391 ZC3H4Q9UPT8 1303 aaKnown RBP10.31□□□□□ -0.76
PDLIM1-203ENST00000490391 RAB3GAP2Q9H2M9 1393 aa10.3□□□□□ -0.76
PDLIM1-203ENST00000490391 MLLT1Q03111 559 aaPredicted RBP10.3□□□□□ -0.76
PDLIM1-203ENST00000490391 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
PDLIM1-203ENST00000490391 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
PDLIM1-203ENST00000490391 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 220 ms