RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-208ENST00000490359 UBR2Q8IWV8 1755 aa22.16■■□□□ 1.14
LRCH4-208ENST00000490359 HEG1Q9ULI3 1381 aa22.15■■□□□ 1.14
LRCH4-208ENST00000490359 C1QTNF8P60827 252 aa22.15■■□□□ 1.14
LRCH4-208ENST00000490359 FMNL2Q96PY5 1086 aa22.15■■□□□ 1.14
LRCH4-208ENST00000490359 STARD3NLO95772 234 aa22.14■■□□□ 1.13
LRCH4-208ENST00000490359 YBX3P16989 372 aaKnown RBP eCLIP22.14■■□□□ 1.13
LRCH4-208ENST00000490359 GPBP1L1Q9HC44 474 aaPredicted RBP22.14■■□□□ 1.13
LRCH4-208ENST00000490359 SENP3-EIF4A1A0A087X0R7 540 aa22.13■■□□□ 1.13
LRCH4-208ENST00000490359 TAF7Q15545 349 aaPredicted RBP22.13■■□□□ 1.13
LRCH4-208ENST00000490359 CCDC146Q8IYE0 955 aa22.13■■□□□ 1.13
LRCH4-208ENST00000490359 THUMPD2Q9BTF0 503 aaKnown RBP22.12■■□□□ 1.13
LRCH4-208ENST00000490359 TEX13AQ9BXU3 409 aaPredicted RBP22.12■■□□□ 1.13
LRCH4-208ENST00000490359 ADAMTS8Q9UP79 889 aa22.12■■□□□ 1.13
LRCH4-208ENST00000490359 ZBTB1Q9Y2K1 713 aa22.12■■□□□ 1.13
LRCH4-208ENST00000490359 SOS1Q07889 1333 aaPredicted RBP22.11■■□□□ 1.13
LRCH4-208ENST00000490359 RIPK4P57078 832 aa22.11■■□□□ 1.13
LRCH4-208ENST00000490359 DLG5Q8TDM6 1919 aa22.11■■□□□ 1.13
LRCH4-208ENST00000490359 GYS1P13807 737 aa22.1■■□□□ 1.13
LRCH4-208ENST00000490359 TMPOP42166 694 aaKnown RBP22.1■■□□□ 1.13
LRCH4-208ENST00000490359 RUNDC1Q96C34 613 aa22.1■■□□□ 1.13
LRCH4-208ENST00000490359 SRP68Q9UHB9 627 aaKnown RBP22.1■■□□□ 1.13
LRCH4-208ENST00000490359 CANXP27824 592 aaKnown RBP22.09■■□□□ 1.13
LRCH4-208ENST00000490359 MIS18AQ9NYP9 233 aa22.09■■□□□ 1.13
LRCH4-208ENST00000490359 USP42Q9H9J4 1324 aaKnown RBP22.08■■□□□ 1.13
LRCH4-208ENST00000490359 ANP32CO43423 234 aa22.08■■□□□ 1.13
LRCH4-208ENST00000490359 PNISRQ8TF01 805 aaKnown RBP22.08■■□□□ 1.13
LRCH4-208ENST00000490359 BCS1LQ9Y276 419 aa22.08■■□□□ 1.13
LRCH4-208ENST00000490359 RRP7AQ9Y3A4 280 aaKnown RBP22.08■■□□□ 1.13
LRCH4-208ENST00000490359 C4AP0C0L4 1744 aa22.07■■□□□ 1.12
LRCH4-208ENST00000490359 LMOD3Q0VAK6 560 aa22.07■■□□□ 1.12
LRCH4-208ENST00000490359 COL15A1P39059 1388 aa22.07■■□□□ 1.12
LRCH4-208ENST00000490359 SNRPA1P09661 255 aaKnown RBP22.06■■□□□ 1.12
LRCH4-208ENST00000490359 NEUROD2Q15784 382 aa22.06■■□□□ 1.12
LRCH4-208ENST00000490359 ARHGAP27Q6ZUM4 889 aa22.06■■□□□ 1.12
LRCH4-208ENST00000490359 WWC3Q9ULE0 1092 aa22.06■■□□□ 1.12
LRCH4-208ENST00000490359 A0A087WZG4 1122 aa22.05■■□□□ 1.12
LRCH4-208ENST00000490359 PRAMEF22A3QJZ6 481 aa22.04■■□□□ 1.12
LRCH4-208ENST00000490359 A1BGP04217 495 aa22.04■■□□□ 1.12
LRCH4-208ENST00000490359 FKBP8Q14318 412 aa22.04■■□□□ 1.12
LRCH4-208ENST00000490359 USPL1Q5W0Q7 1092 aa22.04■■□□□ 1.12
LRCH4-208ENST00000490359 PIM2Q9P1W9 311 aa22.04■■□□□ 1.12
LRCH4-208ENST00000490359 USP16Q9Y5T5 823 aa22.04■■□□□ 1.12
LRCH4-208ENST00000490359 A0A0G2JLW4 131 aa22.03■■□□□ 1.12
LRCH4-208ENST00000490359 EIF5P55010 431 aaKnown RBP22.03■■□□□ 1.12
LRCH4-208ENST00000490359 CCDC184Q52MB2 194 aa22.03■■□□□ 1.12
LRCH4-208ENST00000490359 NARFQ9UHQ1 456 aa22.03■■□□□ 1.12
LRCH4-208ENST00000490359 ZNF330Q9Y3S2 320 aaPredicted RBP22.03■■□□□ 1.12
LRCH4-208ENST00000490359 CHD4Q14839 1912 aa22.03■■□□□ 1.12
LRCH4-208ENST00000490359 ZNF526Q8TF50 670 aaPredicted RBP22.02■■□□□ 1.12
LRCH4-208ENST00000490359 UTRNP46939 3433 aa22.02■■□□□ 1.11
LRCH4-208ENST00000490359 NPHP1O15259 732 aa22.01■■□□□ 1.11
LRCH4-208ENST00000490359 IL6STP40189 918 aaPredicted RBP22.01■■□□□ 1.11
LRCH4-208ENST00000490359 DALRD3Q5D0E6 543 aaKnown RBP22.01■■□□□ 1.11
LRCH4-208ENST00000490359 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
LRCH4-208ENST00000490359 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
LRCH4-208ENST00000490359 PIP4K2AP48426 406 aaPredicted RBP21.99■■□□□ 1.11
LRCH4-208ENST00000490359 EIF4A1P60842 406 aaKnown RBP21.99■■□□□ 1.11
LRCH4-208ENST00000490359 TRIM35Q9UPQ4 493 aa21.99■■□□□ 1.11
LRCH4-208ENST00000490359 ATP10DQ9P241 1426 aa21.98■■□□□ 1.11
LRCH4-208ENST00000490359 DPEP1P16444 411 aa21.98■■□□□ 1.11
LRCH4-208ENST00000490359 DDR1Q08345 913 aa21.98■■□□□ 1.11
LRCH4-208ENST00000490359 MRS2Q9HD23 443 aa21.98■■□□□ 1.11
LRCH4-208ENST00000490359 C16orf71Q8IYS4 520 aaPredicted RBP21.97■■□□□ 1.11
LRCH4-208ENST00000490359 TBC1D2BQ9UPU7 963 aa21.97■■□□□ 1.11
LRCH4-208ENST00000490359 APAF1O14727 1248 aa21.96■■□□□ 1.11
LRCH4-208ENST00000490359 TM4SF1P30408 202 aa21.96■■□□□ 1.11
LRCH4-208ENST00000490359 BCL2L12Q9HB09 334 aa21.96■■□□□ 1.11
LRCH4-208ENST00000490359 BABAM1Q9NWV8 329 aa21.96■■□□□ 1.11
LRCH4-208ENST00000490359 POLRMTO00411 1230 aaKnown RBP21.95■■□□□ 1.1
LRCH4-208ENST00000490359 NFIXQ14938 502 aa21.95■■□□□ 1.1
LRCH4-208ENST00000490359 C10orf71Q711Q0 1435 aa21.95■■□□□ 1.1
LRCH4-208ENST00000490359 NBPF26B4DH59 902 aa21.94■■□□□ 1.1
LRCH4-208ENST00000490359 NBPF10Q6P3W6 841 aaKnown RBP21.94■■□□□ 1.1
LRCH4-208ENST00000490359 DZIP3Q86Y13 1208 aaKnown RBP21.94■■□□□ 1.1
LRCH4-208ENST00000490359 NBPF15Q8N660 670 aa21.94■■□□□ 1.1
LRCH4-208ENST00000490359 LAS1LQ9Y4W2 734 aaKnown RBP21.94■■□□□ 1.1
LRCH4-208ENST00000490359 PDZRN3Q9UPQ7 1066 aa21.93■■□□□ 1.1
LRCH4-208ENST00000490359 GOLGB1Q14789 3259 aaKnown RBP21.93■■□□□ 1.1
LRCH4-208ENST00000490359 CAMTA2O94983 1202 aa21.92■■□□□ 1.1
LRCH4-208ENST00000490359 BICDL1Q6ZP65 573 aa21.92■■□□□ 1.1
LRCH4-208ENST00000490359 LAMB4A4D0S4 1761 aa21.92■■□□□ 1.1
LRCH4-208ENST00000490359 H0YIN7 160 aa21.91■■□□□ 1.1
LRCH4-208ENST00000490359 PXDNLA1KZ92 1463 aa21.9■■□□□ 1.1
LRCH4-208ENST00000490359 KDM2BQ8NHM5 1336 aa21.9■■□□□ 1.1
LRCH4-208ENST00000490359 CHL1O00533 1208 aa21.9■■□□□ 1.1
LRCH4-208ENST00000490359 TBC1D9BQ66K14 1250 aa21.9■■□□□ 1.1
LRCH4-208ENST00000490359 SCN7AQ01118 1682 aa21.9■■□□□ 1.1
LRCH4-208ENST00000490359 SERPINB2P05120 415 aa21.89■■□□□ 1.09
LRCH4-208ENST00000490359 KIF13BQ9NQT8 1826 aa21.89■■□□□ 1.09
LRCH4-208ENST00000490359 NGEFQ8N5V2 710 aa21.88■■□□□ 1.09
LRCH4-208ENST00000490359 SETDB2Q96T68 719 aa21.88■■□□□ 1.09
LRCH4-208ENST00000490359 EIF2S2P20042 333 aaKnown RBP21.87■■□□□ 1.09
LRCH4-208ENST00000490359 PDE6BP35913 854 aa21.87■■□□□ 1.09
LRCH4-208ENST00000490359 CALD1Q05682 793 aaKnown RBP21.87■■□□□ 1.09
LRCH4-208ENST00000490359 ZNF652Q9Y2D9 606 aa21.87■■□□□ 1.09
LRCH4-208ENST00000490359 MYL6BP14649 208 aa21.86■■□□□ 1.09
LRCH4-208ENST00000490359 C9orf131Q5VYM1 1079 aa21.86■■□□□ 1.09
LRCH4-208ENST00000490359 TTLL6Q8N841 843 aa21.86■■□□□ 1.09
LRCH4-208ENST00000490359 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
LRCH4-208ENST00000490359 ERBB4Q15303 1308 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms