RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 PCDHB11Q9Y5F2 797 aa10.01□□□□□ -0.81
TM9SF3-206ENST00000490192 SEPT12Q8IYM1 358 aa10□□□□□ -0.81
TM9SF3-206ENST00000490192 FAM177A1Q8N128 213 aaPredicted RBP10□□□□□ -0.81
TM9SF3-206ENST00000490192 BCL11AQ9H165 835 aa10□□□□□ -0.81
TM9SF3-206ENST00000490192 PTCD1O75127 700 aaKnown RBP9.99□□□□□ -0.81
TM9SF3-206ENST00000490192 Q6ZVU0 165 aa9.99□□□□□ -0.81
TM9SF3-206ENST00000490192 RGL4Q8IZJ4 473 aa9.99□□□□□ -0.81
TM9SF3-206ENST00000490192 SOBPA7XYQ1 873 aa9.98□□□□□ -0.81
TM9SF3-206ENST00000490192 M0R2N6 131 aa9.98□□□□□ -0.81
TM9SF3-206ENST00000490192 ERVH48-1M5A8F1 160 aa9.98□□□□□ -0.81
TM9SF3-206ENST00000490192 CCDC125Q86Z20 511 aa9.98□□□□□ -0.81
TM9SF3-206ENST00000490192 GAS2L2Q8NHY3 880 aa9.98□□□□□ -0.81
TM9SF3-206ENST00000490192 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
TM9SF3-206ENST00000490192 TTLL8A6PVC2 850 aa9.97□□□□□ -0.81
TM9SF3-206ENST00000490192 NAA30Q147X3 362 aaPredicted RBP9.97□□□□□ -0.81
TM9SF3-206ENST00000490192 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
TM9SF3-206ENST00000490192 HELQQ8TDG4 1101 aa9.97□□□□□ -0.81
TM9SF3-206ENST00000490192 IRF7Q92985 503 aa9.97□□□□□ -0.81
TM9SF3-206ENST00000490192 ESPNB1AK53 854 aa9.96□□□□□ -0.82
TM9SF3-206ENST00000490192 RELBQ01201 579 aa9.96□□□□□ -0.82
TM9SF3-206ENST00000490192 NAALADL2Q58DX5 795 aa9.96□□□□□ -0.82
TM9SF3-206ENST00000490192 LCE2AQ5TA79 106 aaPredicted RBP9.96□□□□□ -0.82
TM9SF3-206ENST00000490192 ZNF784Q8NCA9 323 aaPredicted RBP9.96□□□□□ -0.82
TM9SF3-206ENST00000490192 SOS2Q07890 1332 aaPredicted RBP9.96□□□□□ -0.82
TM9SF3-206ENST00000490192 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.95□□□□□ -0.821e-6■■■■□ 25.2
TM9SF3-206ENST00000490192 COL26A1Q96A83 441 aa9.95□□□□□ -0.82
TM9SF3-206ENST00000490192 ESF1Q9H501 851 aaKnown RBP9.95□□□□□ -0.82
TM9SF3-206ENST00000490192 SPINT1O43278 529 aa9.94□□□□□ -0.82
TM9SF3-206ENST00000490192 P4HBP07237 508 aaKnown RBP9.94□□□□□ -0.82
TM9SF3-206ENST00000490192 VEGFBP49765 207 aa9.94□□□□□ -0.82
TM9SF3-206ENST00000490192 AGBL1Q96MI9 1066 aa9.94□□□□□ -0.82
TM9SF3-206ENST00000490192 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
TM9SF3-206ENST00000490192 ZNF358Q9NW07 568 aa9.94□□□□□ -0.82
TM9SF3-206ENST00000490192 FIGNL2A6NMB9 653 aa9.93□□□□□ -0.82
TM9SF3-206ENST00000490192 FAM13AO94988 1023 aa9.93□□□□□ -0.82
TM9SF3-206ENST00000490192 ERCC5P28715 1186 aaPredicted RBP9.93□□□□□ -0.82
TM9SF3-206ENST00000490192 TMC7Q7Z402 723 aa9.93□□□□□ -0.82
TM9SF3-206ENST00000490192 RBCK1Q9BYM8 510 aa9.93□□□□□ -0.82
TM9SF3-206ENST00000490192 PPP1R1BQ9UD71 204 aaPredicted RBP9.93□□□□□ -0.82
TM9SF3-206ENST00000490192 H3BM21 787 aa9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 MYCP01106 439 aaPredicted RBP9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 IGFBP4P22692 258 aa9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 INSM1Q01101 510 aaPredicted RBP9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 MRPL58Q14197 206 aaKnown RBP9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 ZNF395Q9H8N7 513 aaPredicted RBP9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 POLMQ9NP87 494 aaPredicted RBP9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 CYLDQ9NQC7 956 aa9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 DNMT3LQ9UJW3 386 aa9.92□□□□□ -0.82
TM9SF3-206ENST00000490192 FOXO3O43524 673 aa9.91□□□□□ -0.82
TM9SF3-206ENST00000490192 ADH1AP07327 375 aa9.91□□□□□ -0.82
TM9SF3-206ENST00000490192 NPR3P17342 541 aa9.91□□□□□ -0.82
TM9SF3-206ENST00000490192 CDK11BP21127 795 aaKnown RBP9.91□□□□□ -0.82
TM9SF3-206ENST00000490192 CDK11AQ9UQ88 783 aaPredicted RBP9.91□□□□□ -0.82
TM9SF3-206ENST00000490192 WIPF1O43516 503 aa9.9□□□□□ -0.82
TM9SF3-206ENST00000490192 LILRA1O75019 489 aa9.9□□□□□ -0.82
TM9SF3-206ENST00000490192 SCG3Q8WXD2 468 aaKnown RBP9.9□□□□□ -0.82
TM9SF3-206ENST00000490192 UBXN4Q92575 508 aa9.9□□□□□ -0.82
TM9SF3-206ENST00000490192 INSM2Q96T92 566 aaPredicted RBP9.9□□□□□ -0.82
TM9SF3-206ENST00000490192 TMEM229AB2RXF0 380 aa9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 SCAMP3O14828 347 aaKnown RBP9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 NDUFB5O43674 189 aa9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 MPSTP25325 297 aa9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 ADD1P35611 737 aaKnown RBP9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 PTGIRP43119 386 aa9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 HDLBPQ00341 1268 aaKnown RBP9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 SF3A1Q15459 793 aaKnown RBP9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 C9orf131Q5VYM1 1079 aa9.89□□□□□ -0.83
TM9SF3-206ENST00000490192 TREHO43280 583 aa9.88□□□□□ -0.83
TM9SF3-206ENST00000490192 SCTRP47872 440 aa9.88□□□□□ -0.83
TM9SF3-206ENST00000490192 FMR1Q06787 632 aaKnown RBP eCLIP9.88□□□□□ -0.83
TM9SF3-206ENST00000490192 BRPF3Q9ULD4 1205 aa9.88□□□□□ -0.83
TM9SF3-206ENST00000490192 PPFIA3O75145 1194 aa9.87□□□□□ -0.83
TM9SF3-206ENST00000490192 CTSOP43234 321 aaPredicted RBP9.87□□□□□ -0.83
TM9SF3-206ENST00000490192 TNS4Q8IZW8 715 aa9.87□□□□□ -0.83
TM9SF3-206ENST00000490192 TMC1Q8TDI8 760 aa9.87□□□□□ -0.83
TM9SF3-206ENST00000490192 VTI1AQ96AJ9 217 aa9.87□□□□□ -0.83
TM9SF3-206ENST00000490192 ATAD2Q6PL18 1390 aa9.87□□□□□ -0.83
TM9SF3-206ENST00000490192 PTSQ03393 145 aa9.86□□□□□ -0.83
TM9SF3-206ENST00000490192 LDLRAD1Q5T700 205 aa9.86□□□□□ -0.83
TM9SF3-206ENST00000490192 CC2D2BQ6DHV5 1058 aa9.86□□□□□ -0.83
TM9SF3-206ENST00000490192 SAP130Q9H0E3 1048 aa9.86□□□□□ -0.83
TM9SF3-206ENST00000490192 GMPRP36959 345 aa9.85□□□□□ -0.83
TM9SF3-206ENST00000490192 XPCQ01831 940 aaPredicted RBP9.85□□□□□ -0.83
TM9SF3-206ENST00000490192 CHMP7Q8WUX9 453 aaPredicted RBP9.85□□□□□ -0.83
TM9SF3-206ENST00000490192 FAM161BQ96MY7 647 aa9.85□□□□□ -0.83
TM9SF3-206ENST00000490192 BACH1O14867 736 aa9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 STAU1O95793 577 aaKnown RBP9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 LDHBP07195 334 aaKnown RBP9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 MAPK8P45983 427 aa9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 SCNN1DP51172 638 aa9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 GDF10P55107 478 aa9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 C16orf46Q6P387 395 aa9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 TSPAN10Q9H1Z9 355 aaPredicted RBP9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 PARP2Q9UGN5 583 aa9.84□□□□□ -0.83
TM9SF3-206ENST00000490192 MEN1O00255 615 aa9.83□□□□□ -0.84
TM9SF3-206ENST00000490192 SMARCA5O60264 1052 aaPredicted RBP9.83□□□□□ -0.84
TM9SF3-206ENST00000490192 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
TM9SF3-206ENST00000490192 PLCB3Q01970 1234 aa9.83□□□□□ -0.84
TM9SF3-206ENST00000490192 AAMPQ13685 434 aa9.83□□□□□ -0.84
TM9SF3-206ENST00000490192 DSC3Q14574 896 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms