RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 PARP3Q9Y6F1 533 aa24.43■■□□□ 1.5
COL9A2-209ENST00000490132 DDR1Q08345 913 aa24.42■■□□□ 1.5
COL9A2-209ENST00000490132 DDX10Q13206 875 aaKnown RBP24.42■■□□□ 1.5
COL9A2-209ENST00000490132 USPL1Q5W0Q7 1092 aa24.42■■□□□ 1.5
COL9A2-209ENST00000490132 BRCA1P38398 1863 aaKnown RBP24.42■■□□□ 1.5
COL9A2-209ENST00000490132 BTBD11A6QL63 1104 aa24.4■■□□□ 1.5
COL9A2-209ENST00000490132 CANXP27824 592 aaKnown RBP24.4■■□□□ 1.5
COL9A2-209ENST00000490132 DCTN1Q14203 1278 aa24.4■■□□□ 1.5
COL9A2-209ENST00000490132 AFDNP55196 1824 aaKnown RBP24.4■■□□□ 1.5
COL9A2-209ENST00000490132 ZPR1O75312 459 aa24.39■■□□□ 1.49
COL9A2-209ENST00000490132 STARD3NLO95772 234 aa24.39■■□□□ 1.49
COL9A2-209ENST00000490132 RTF1Q92541 710 aaKnown RBP24.39■■□□□ 1.49
COL9A2-209ENST00000490132 FMNL2Q96PY5 1086 aa24.39■■□□□ 1.49
COL9A2-209ENST00000490132 NARFQ9UHQ1 456 aa24.39■■□□□ 1.49
COL9A2-209ENST00000490132 TGFB2P61812 414 aa24.38■■□□□ 1.49
COL9A2-209ENST00000490132 PLEKHF1Q96S99 279 aa24.38■■□□□ 1.49
COL9A2-209ENST00000490132 POLRMTO00411 1230 aaKnown RBP24.37■■□□□ 1.49
COL9A2-209ENST00000490132 TM4SF1P30408 202 aa24.37■■□□□ 1.49
COL9A2-209ENST00000490132 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
COL9A2-209ENST00000490132 RALBP1Q15311 655 aa24.37■■□□□ 1.49
COL9A2-209ENST00000490132 BCL2L12Q9HB09 334 aa24.37■■□□□ 1.49
COL9A2-209ENST00000490132 A0A0G2JLW4 131 aa24.36■■□□□ 1.49
COL9A2-209ENST00000490132 HTATSF1O43719 755 aaKnown RBP24.36■■□□□ 1.49
COL9A2-209ENST00000490132 TEX13AQ9BXU3 409 aaPredicted RBP24.36■■□□□ 1.49
COL9A2-209ENST00000490132 SCN7AQ01118 1682 aa24.36■■□□□ 1.49
COL9A2-209ENST00000490132 NRXN2Q9P2S2 1712 aa24.35■■□□□ 1.49
COL9A2-209ENST00000490132 DPEP1P16444 411 aa24.35■■□□□ 1.49
COL9A2-209ENST00000490132 NFIXQ14938 502 aa24.34■■□□□ 1.49
COL9A2-209ENST00000490132 PRAMEF22A3QJZ6 481 aa24.33■■□□□ 1.49
COL9A2-209ENST00000490132 KDM3BQ7LBC6 1761 aa24.33■■□□□ 1.49
COL9A2-209ENST00000490132 A1BGP04217 495 aa24.32■■□□□ 1.48
COL9A2-209ENST00000490132 ARFGEF1Q9Y6D6 1849 aa24.31■■□□□ 1.48
COL9A2-209ENST00000490132 NEFMP07197 916 aa24.31■■□□□ 1.48
COL9A2-209ENST00000490132 KCNA3P22001 575 aa24.31■■□□□ 1.48
COL9A2-209ENST00000490132 USP16Q9Y5T5 823 aa24.31■■□□□ 1.48
COL9A2-209ENST00000490132 BCORQ6W2J9 1755 aa24.31■■□□□ 1.48
COL9A2-209ENST00000490132 IL6STP40189 918 aaPredicted RBP24.3■■□□□ 1.48
COL9A2-209ENST00000490132 NFE2L2Q16236 605 aa24.3■■□□□ 1.48
COL9A2-209ENST00000490132 BCS1LQ9Y276 419 aa24.3■■□□□ 1.48
COL9A2-209ENST00000490132 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
COL9A2-209ENST00000490132 MYBBP1AQ9BQG0 1328 aaKnown RBP24.3■■□□□ 1.48
COL9A2-209ENST00000490132 A0A087WZG4 1122 aa24.29■■□□□ 1.48
COL9A2-209ENST00000490132 TAF7Q15545 349 aaPredicted RBP24.29■■□□□ 1.48
COL9A2-209ENST00000490132 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
COL9A2-209ENST00000490132 ADCY9O60503 1353 aa24.29■■□□□ 1.48
COL9A2-209ENST00000490132 THUMPD2Q9BTF0 503 aaKnown RBP24.28■■□□□ 1.48
COL9A2-209ENST00000490132 MIS18AQ9NYP9 233 aa24.28■■□□□ 1.48
COL9A2-209ENST00000490132 TBC1D2BQ9UPU7 963 aa24.28■■□□□ 1.48
COL9A2-209ENST00000490132 SNRPA1P09661 255 aaKnown RBP24.27■■□□□ 1.48
COL9A2-209ENST00000490132 PIP4K2AP48426 406 aaPredicted RBP24.27■■□□□ 1.48
COL9A2-209ENST00000490132 MAPK8IP3Q9UPT6 1336 aa24.27■■□□□ 1.48
COL9A2-209ENST00000490132 ATP10DQ9P241 1426 aa24.27■■□□□ 1.48
COL9A2-209ENST00000490132 CHRNA5P30532 468 aa24.26■■□□□ 1.47
COL9A2-209ENST00000490132 PNNQ9H307 717 aaKnown RBP24.26■■□□□ 1.47
COL9A2-209ENST00000490132 DLEC1Q9Y238 1755 aa24.26■■□□□ 1.47
COL9A2-209ENST00000490132 SERPINB2P05120 415 aa24.25■■□□□ 1.47
COL9A2-209ENST00000490132 TBC1D9BQ66K14 1250 aa24.25■■□□□ 1.47
COL9A2-209ENST00000490132 BICDL1Q6ZP65 573 aa24.25■■□□□ 1.47
COL9A2-209ENST00000490132 ANKRD31Q8N7Z5 1873 aa24.24■■□□□ 1.47
COL9A2-209ENST00000490132 CAMTA2O94983 1202 aa24.24■■□□□ 1.47
COL9A2-209ENST00000490132 CARMIL3Q8ND23 1372 aa24.24■■□□□ 1.47
COL9A2-209ENST00000490132 PIM2Q9P1W9 311 aa24.23■■□□□ 1.47
COL9A2-209ENST00000490132 NBPF26B4DH59 902 aa24.21■■□□□ 1.47
COL9A2-209ENST00000490132 NBPF10Q6P3W6 841 aaKnown RBP24.21■■□□□ 1.47
COL9A2-209ENST00000490132 DZIP3Q86Y13 1208 aaKnown RBP24.21■■□□□ 1.47
COL9A2-209ENST00000490132 NBPF15Q8N660 670 aa24.21■■□□□ 1.47
COL9A2-209ENST00000490132 PNISRQ8TF01 805 aaKnown RBP24.21■■□□□ 1.47
COL9A2-209ENST00000490132 DALRD3Q5D0E6 543 aaKnown RBP24.19■■□□□ 1.46
COL9A2-209ENST00000490132 ARHGAP27Q6ZUM4 889 aa24.19■■□□□ 1.46
COL9A2-209ENST00000490132 NPM2Q86SE8 214 aaKnown RBP24.19■■□□□ 1.46
COL9A2-209ENST00000490132 PRKRIP1Q9H875 184 aaPredicted RBP24.19■■□□□ 1.46
COL9A2-209ENST00000490132 RIPK4P57078 832 aa24.18■■□□□ 1.46
COL9A2-209ENST00000490132 EIF4A1P60842 406 aaKnown RBP24.18■■□□□ 1.46
COL9A2-209ENST00000490132 COL11A2P13942 1736 aaPredicted RBP24.18■■□□□ 1.46
COL9A2-209ENST00000490132 GIGYF1O75420 1035 aaPredicted RBP24.17■■□□□ 1.46
COL9A2-209ENST00000490132 TMPOP42166 694 aaKnown RBP24.17■■□□□ 1.46
COL9A2-209ENST00000490132 CCDC146Q8IYE0 955 aa24.17■■□□□ 1.46
COL9A2-209ENST00000490132 PRR5LQ6MZQ0 368 aa24.16■■□□□ 1.46
COL9A2-209ENST00000490132 SBF1O95248 1867 aa24.15■■□□□ 1.46
COL9A2-209ENST00000490132 C1QTNF8P60827 252 aa24.15■■□□□ 1.46
COL9A2-209ENST00000490132 CCDC24Q8N4L8 307 aa24.15■■□□□ 1.46
COL9A2-209ENST00000490132 ZNF526Q8TF50 670 aaPredicted RBP24.15■■□□□ 1.46
COL9A2-209ENST00000490132 RRP7AQ9Y3A4 280 aaKnown RBP24.15■■□□□ 1.46
COL9A2-209ENST00000490132 C2CD5Q86YS7 1000 aa24.14■■□□□ 1.45
COL9A2-209ENST00000490132 SETDB2Q96T68 719 aa24.14■■□□□ 1.45
COL9A2-209ENST00000490132 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
COL9A2-209ENST00000490132 GPBP1L1Q9HC44 474 aaPredicted RBP24.13■■□□□ 1.45
COL9A2-209ENST00000490132 TSPYL4Q9UJ04 414 aa24.12■■□□□ 1.45
COL9A2-209ENST00000490132 CLEC4GQ6UXB4 293 aa24.11■■□□□ 1.45
COL9A2-209ENST00000490132 BRIP1Q9BX63 1249 aa24.11■■□□□ 1.45
COL9A2-209ENST00000490132 ADAMTS8Q9UP79 889 aa24.11■■□□□ 1.45
COL9A2-209ENST00000490132 NUP98P52948 1817 aa24.1■■□□□ 1.45
COL9A2-209ENST00000490132 H0YIN7 160 aa24.1■■□□□ 1.45
COL9A2-209ENST00000490132 LMOD3Q0VAK6 560 aa24.1■■□□□ 1.45
COL9A2-209ENST00000490132 CNBD1Q8NA66 436 aa24.1■■□□□ 1.45
COL9A2-209ENST00000490132 RUNDC1Q96C34 613 aa24.1■■□□□ 1.45
COL9A2-209ENST00000490132 ZNF652Q9Y2D9 606 aa24.1■■□□□ 1.45
COL9A2-209ENST00000490132 CACNA1SQ13698 1873 aa24.09■■□□□ 1.45
COL9A2-209ENST00000490132 ZEB1P37275 1124 aaPredicted RBP24.09■■□□□ 1.45
COL9A2-209ENST00000490132 NEUROD2Q15784 382 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms