RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
LINC01140-207ENST00000490006 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 SLC4A9Q96Q91 983 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 LRRC4BQ9NT99 713 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 BABAM1Q9NWV8 329 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 USP16Q9Y5T5 823 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 EP400Q96L91 3159 aa13.68□□□□□ -0.22
LINC01140-207ENST00000490006 ZBED9Q6R2W3 1325 aa13.67□□□□□ -0.22
LINC01140-207ENST00000490006 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
LINC01140-207ENST00000490006 PIP4K2AP48426 406 aaPredicted RBP13.67□□□□□ -0.22
LINC01140-207ENST00000490006 ITPK1Q13572 414 aa13.67□□□□□ -0.22
LINC01140-207ENST00000490006 DUSP27Q5VZP5 1158 aa13.67□□□□□ -0.22
LINC01140-207ENST00000490006 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
LINC01140-207ENST00000490006 ZNF330Q9Y3S2 320 aaPredicted RBP13.67□□□□□ -0.22
LINC01140-207ENST00000490006 A1BGP04217 495 aa13.66□□□□□ -0.22
LINC01140-207ENST00000490006 CANXP27824 592 aaKnown RBP13.66□□□□□ -0.22
LINC01140-207ENST00000490006 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
LINC01140-207ENST00000490006 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
LINC01140-207ENST00000490006 NHSQ6T4R5 1651 aa13.66□□□□□ -0.22
LINC01140-207ENST00000490006 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
LINC01140-207ENST00000490006 STARD3NLO95772 234 aa13.65□□□□□ -0.22
LINC01140-207ENST00000490006 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.22
LINC01140-207ENST00000490006 TWISTNBQ3B726 338 aaPredicted RBP13.64□□□□□ -0.23
LINC01140-207ENST00000490006 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
LINC01140-207ENST00000490006 TEX13AQ9BXU3 409 aaPredicted RBP13.64□□□□□ -0.23
LINC01140-207ENST00000490006 HEG1Q9ULI3 1381 aa13.64□□□□□ -0.23
LINC01140-207ENST00000490006 ANXA1P04083 346 aa13.63□□□□□ -0.23
LINC01140-207ENST00000490006 MYL6BP14649 208 aa13.63□□□□□ -0.23
LINC01140-207ENST00000490006 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
LINC01140-207ENST00000490006 MRC1P22897 1456 aa13.63□□□□□ -0.23
LINC01140-207ENST00000490006 CYP19A1P11511 503 aaPredicted RBP13.62□□□□□ -0.23
LINC01140-207ENST00000490006 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
LINC01140-207ENST00000490006 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
LINC01140-207ENST00000490006 AK7Q96M32 723 aa13.62□□□□□ -0.23
LINC01140-207ENST00000490006 TFCP2L1Q9NZI6 479 aa13.62□□□□□ -0.23
LINC01140-207ENST00000490006 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
LINC01140-207ENST00000490006 PHF14O94880 888 aa13.61□□□□□ -0.23
LINC01140-207ENST00000490006 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
LINC01140-207ENST00000490006 NBPF14Q5TI25 921 aa13.61□□□□□ -0.23
LINC01140-207ENST00000490006 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
LINC01140-207ENST00000490006 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
LINC01140-207ENST00000490006 STK32BQ9NY57 414 aa13.61□□□□□ -0.23
LINC01140-207ENST00000490006 SOCS7O14512 581 aa13.6□□□□□ -0.23
LINC01140-207ENST00000490006 GNPATO15228 680 aa13.6□□□□□ -0.23
LINC01140-207ENST00000490006 VAMP4O75379 141 aa13.6□□□□□ -0.23
LINC01140-207ENST00000490006 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
LINC01140-207ENST00000490006 AIMP1Q12904 312 aaKnown RBP13.59□□□□□ -0.23
LINC01140-207ENST00000490006 INTS5Q6P9B9 1019 aaKnown RBP13.59□□□□□ -0.23
LINC01140-207ENST00000490006 BCL2L13Q9BXK5 485 aa13.59□□□□□ -0.23
LINC01140-207ENST00000490006 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
LINC01140-207ENST00000490006 TNS1Q9HBL0 1735 aaKnown RBP13.59□□□□□ -0.23
LINC01140-207ENST00000490006 CCDC30Q5VVM6 783 aa13.58□□□□□ -0.23
LINC01140-207ENST00000490006 STK31Q9BXU1 1019 aa13.58□□□□□ -0.23
LINC01140-207ENST00000490006 ZBTB1Q9Y2K1 713 aa13.58□□□□□ -0.23
LINC01140-207ENST00000490006 KCPQ6ZWJ8 1503 aa13.58□□□□□ -0.24
LINC01140-207ENST00000490006 PSDA5PKW4 1024 aaPredicted RBP13.58□□□□□ -0.24
LINC01140-207ENST00000490006 ZNF827Q17R98 1081 aa13.58□□□□□ -0.24
LINC01140-207ENST00000490006 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
LINC01140-207ENST00000490006 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
LINC01140-207ENST00000490006 RTCBQ9Y3I0 505 aaKnown RBP13.58□□□□□ -0.24
LINC01140-207ENST00000490006 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
LINC01140-207ENST00000490006 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
LINC01140-207ENST00000490006 R3HDM1Q15032 1099 aaKnown RBP13.57□□□□□ -0.24
LINC01140-207ENST00000490006 SLC15A2Q16348 729 aa13.57□□□□□ -0.24
LINC01140-207ENST00000490006 RC3H1Q5TC82 1133 aaKnown RBP13.57□□□□□ -0.24
LINC01140-207ENST00000490006 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
LINC01140-207ENST00000490006 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
LINC01140-207ENST00000490006 ANO8Q9HCE9 1232 aaPredicted RBP13.57□□□□□ -0.24
LINC01140-207ENST00000490006 TBC1D2BQ9UPU7 963 aa13.57□□□□□ -0.24
LINC01140-207ENST00000490006 RPS6KA4O75676 772 aa13.56□□□□□ -0.24
LINC01140-207ENST00000490006 HMGB2P26583 209 aaKnown RBP13.56□□□□□ -0.24
LINC01140-207ENST00000490006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.55□□□□□ -0.24
LINC01140-207ENST00000490006 HOXB7P09629 217 aa13.55□□□□□ -0.24
LINC01140-207ENST00000490006 RFC4P35249 363 aa13.55□□□□□ -0.24
LINC01140-207ENST00000490006 G2E3Q7L622 706 aa13.55□□□□□ -0.24
LINC01140-207ENST00000490006 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
LINC01140-207ENST00000490006 XAGE3Q8WTP9 111 aa13.55□□□□□ -0.24
LINC01140-207ENST00000490006 SSH1Q8WYL5 1049 aa13.55□□□□□ -0.24
LINC01140-207ENST00000490006 ARHGEF1Q92888 912 aaKnown RBP13.55□□□□□ -0.24
LINC01140-207ENST00000490006 CHMP4AQ9BY43 222 aa13.55□□□□□ -0.24
LINC01140-207ENST00000490006 PHAXQ9H814 394 aaKnown RBP13.55□□□□□ -0.24
LINC01140-207ENST00000490006 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC01140-207ENST00000490006 SMC4Q9NTJ3 1288 aa13.55□□□□□ -0.24
LINC01140-207ENST00000490006 DBF4Q9UBU7 674 aaPredicted RBP13.55□□□□□ -0.24
LINC01140-207ENST00000490006 PAPPAQ13219 1627 aa13.54□□□□□ -0.24
LINC01140-207ENST00000490006 PDIA6Q15084 440 aa13.54□□□□□ -0.24
LINC01140-207ENST00000490006 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
LINC01140-207ENST00000490006 COPS6Q7L5N1 327 aa13.54□□□□□ -0.24
LINC01140-207ENST00000490006 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
LINC01140-207ENST00000490006 SRP68Q9UHB9 627 aaKnown RBP13.54□□□□□ -0.24
LINC01140-207ENST00000490006 LY75O60449 1722 aa13.54□□□□□ -0.24
LINC01140-207ENST00000490006 CNTNAP4Q9C0A0 1308 aa13.54□□□□□ -0.24
LINC01140-207ENST00000490006 ZPR1O75312 459 aa13.53□□□□□ -0.24
LINC01140-207ENST00000490006 BCAR3O75815 825 aa13.53□□□□□ -0.24
LINC01140-207ENST00000490006 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
LINC01140-207ENST00000490006 ZNF428Q96B54 188 aa13.53□□□□□ -0.24
LINC01140-207ENST00000490006 PDGFDQ9GZP0 370 aaPredicted RBP13.53□□□□□ -0.24
LINC01140-207ENST00000490006 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms