RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
SRSF4-204ENST00000489898 HMGB2P26583 209 aaKnown RBP15.94■□□□□ 0.14
SRSF4-204ENST00000489898 FKBP8Q14318 412 aa15.94■□□□□ 0.14
SRSF4-204ENST00000489898 KCNQ3O43525 872 aa15.93■□□□□ 0.14
SRSF4-204ENST00000489898 VSIG10Q8N0Z9 540 aa15.93■□□□□ 0.14
SRSF4-204ENST00000489898 GAS2L2Q8NHY3 880 aa15.93■□□□□ 0.14
SRSF4-204ENST00000489898 ZNF496Q96IT1 587 aaPredicted RBP15.93■□□□□ 0.14
SRSF4-204ENST00000489898 CCDC87Q9NVE4 849 aa15.93■□□□□ 0.14
SRSF4-204ENST00000489898 GNAT3A8MTJ3 354 aa15.92■□□□□ 0.14
SRSF4-204ENST00000489898 KCNA3P22001 575 aa15.92■□□□□ 0.14
SRSF4-204ENST00000489898 TRAPPC3LQ5T215 181 aa15.92■□□□□ 0.14
SRSF4-204ENST00000489898 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
SRSF4-204ENST00000489898 ZNF790Q6PG37 636 aa15.91■□□□□ 0.14
SRSF4-204ENST00000489898 ATP10DQ9P241 1426 aa15.91■□□□□ 0.14
SRSF4-204ENST00000489898 LAMB2P55268 1798 aa15.9■□□□□ 0.14
SRSF4-204ENST00000489898 POLRMTO00411 1230 aaKnown RBP15.9■□□□□ 0.14
SRSF4-204ENST00000489898 TM4SF1P30408 202 aa15.9■□□□□ 0.14
SRSF4-204ENST00000489898 GPR162Q16538 588 aa15.9■□□□□ 0.14
SRSF4-204ENST00000489898 EIF5P55010 431 aaKnown RBP15.89■□□□□ 0.13
SRSF4-204ENST00000489898 PRAMEF22A3QJZ6 481 aa15.88■□□□□ 0.13
SRSF4-204ENST00000489898 NLGN1Q8N2Q7 840 aa15.88■□□□□ 0.13
SRSF4-204ENST00000489898 WWC3Q9ULE0 1092 aa15.88■□□□□ 0.13
SRSF4-204ENST00000489898 SLX4Q8IY92 1834 aa15.88■□□□□ 0.13
SRSF4-204ENST00000489898 FCHSD2O94868 740 aa15.87■□□□□ 0.13
SRSF4-204ENST00000489898 DCTN1Q14203 1278 aa15.87■□□□□ 0.13
SRSF4-204ENST00000489898 USPL1Q5W0Q7 1092 aa15.87■□□□□ 0.13
SRSF4-204ENST00000489898 MCM10Q7L590 875 aa15.87■□□□□ 0.13
SRSF4-204ENST00000489898 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
SRSF4-204ENST00000489898 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
SRSF4-204ENST00000489898 U2AF1L5P0DN76 240 aaPredicted RBP15.86■□□□□ 0.13
SRSF4-204ENST00000489898 RFC4P35249 363 aa15.86■□□□□ 0.13
SRSF4-204ENST00000489898 U2AF1Q01081 240 aaKnown RBP eCLIP15.86■□□□□ 0.13
SRSF4-204ENST00000489898 NFIXQ14938 502 aa15.85■□□□□ 0.13
SRSF4-204ENST00000489898 PELP1Q8IZL8 1130 aaKnown RBP15.85■□□□□ 0.13
SRSF4-204ENST00000489898 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
SRSF4-204ENST00000489898 DPEP1P16444 411 aa15.84■□□□□ 0.13
SRSF4-204ENST00000489898 A0A0G2JLW4 131 aa15.83■□□□□ 0.12
SRSF4-204ENST00000489898 TGFB2P61812 414 aa15.83■□□□□ 0.12
SRSF4-204ENST00000489898 TEFQ10587 303 aa15.83■□□□□ 0.12
SRSF4-204ENST00000489898 NBPF26B4DH59 902 aa15.82■□□□□ 0.12
SRSF4-204ENST00000489898 GRIN3BO60391 1043 aa15.82■□□□□ 0.12
SRSF4-204ENST00000489898 NBPF10Q6P3W6 841 aaKnown RBP15.82■□□□□ 0.12
SRSF4-204ENST00000489898 NBPF15Q8N660 670 aa15.82■□□□□ 0.12
SRSF4-204ENST00000489898 CAMTA2O94983 1202 aa15.81■□□□□ 0.12
SRSF4-204ENST00000489898 DDX60Q8IY21 1712 aaKnown RBP15.81■□□□□ 0.12
SRSF4-204ENST00000489898 USP16Q9Y5T5 823 aa15.81■□□□□ 0.12
SRSF4-204ENST00000489898 SNED1Q8TER0 1413 aa15.8■□□□□ 0.12
SRSF4-204ENST00000489898 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
SRSF4-204ENST00000489898 A1BGP04217 495 aa15.8■□□□□ 0.12
SRSF4-204ENST00000489898 IL6STP40189 918 aaPredicted RBP15.8■□□□□ 0.12
SRSF4-204ENST00000489898 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
SRSF4-204ENST00000489898 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
SRSF4-204ENST00000489898 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
SRSF4-204ENST00000489898 THUMPD2Q9BTF0 503 aaKnown RBP15.8■□□□□ 0.12
SRSF4-204ENST00000489898 NUDCQ9Y266 331 aa15.8■□□□□ 0.12
SRSF4-204ENST00000489898 PCNTO95613 3336 aa15.79■□□□□ 0.12
SRSF4-204ENST00000489898 BTBD11A6QL63 1104 aa15.79■□□□□ 0.12
SRSF4-204ENST00000489898 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
SRSF4-204ENST00000489898 CHRNA5P30532 468 aa15.79■□□□□ 0.12
SRSF4-204ENST00000489898 PRELPP51888 382 aa15.79■□□□□ 0.12
SRSF4-204ENST00000489898 PARP3Q9Y6F1 533 aa15.79■□□□□ 0.12
SRSF4-204ENST00000489898 MYBBP1AQ9BQG0 1328 aaKnown RBP15.78■□□□□ 0.12
SRSF4-204ENST00000489898 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
SRSF4-204ENST00000489898 TBC1D9BQ66K14 1250 aa15.78■□□□□ 0.12
SRSF4-204ENST00000489898 WDR90Q96KV7 1748 aa15.77■□□□□ 0.12
SRSF4-204ENST00000489898 DDX10Q13206 875 aaKnown RBP15.77■□□□□ 0.12
SRSF4-204ENST00000489898 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
SRSF4-204ENST00000489898 COL4A1P02462 1669 aa15.76■□□□□ 0.11
SRSF4-204ENST00000489898 STARD3NLO95772 234 aa15.76■□□□□ 0.11
SRSF4-204ENST00000489898 RALBP1Q15311 655 aa15.76■□□□□ 0.11
SRSF4-204ENST00000489898 LRRC37AA6NMS7 1700 aa15.76■□□□□ 0.11
SRSF4-204ENST00000489898 ZPR1O75312 459 aa15.75■□□□□ 0.11
SRSF4-204ENST00000489898 PRR5LQ6MZQ0 368 aa15.75■□□□□ 0.11
SRSF4-204ENST00000489898 MIS18AQ9NYP9 233 aa15.75■□□□□ 0.11
SRSF4-204ENST00000489898 TBC1D2BQ9UPU7 963 aa15.75■□□□□ 0.11
SRSF4-204ENST00000489898 TAF1P21675 1872 aa15.75■□□□□ 0.11
SRSF4-204ENST00000489898 SERPINB2P05120 415 aa15.74■□□□□ 0.11
SRSF4-204ENST00000489898 BCS1LQ9Y276 419 aa15.74■□□□□ 0.11
SRSF4-204ENST00000489898 ABCC12Q96J65 1359 aa15.74■□□□□ 0.11
SRSF4-204ENST00000489898 C1QTNF8P60827 252 aa15.73■□□□□ 0.11
SRSF4-204ENST00000489898 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
SRSF4-204ENST00000489898 TEX13AQ9BXU3 409 aaPredicted RBP15.73■□□□□ 0.11
SRSF4-204ENST00000489898 RIC1Q4ADV7 1423 aa15.73■□□□□ 0.11
SRSF4-204ENST00000489898 COL4A5P29400 1685 aa15.73■□□□□ 0.11
SRSF4-204ENST00000489898 ADAMTSL1Q8N6G6 1762 aa15.72■□□□□ 0.11
SRSF4-204ENST00000489898 LTBP1Q14766 1721 aa15.72■□□□□ 0.11
SRSF4-204ENST00000489898 KIF3CO14782 793 aa15.72■□□□□ 0.11
SRSF4-204ENST00000489898 GIGYF1O75420 1035 aaPredicted RBP15.72■□□□□ 0.11
SRSF4-204ENST00000489898 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
SRSF4-204ENST00000489898 TAF7Q15545 349 aaPredicted RBP15.72■□□□□ 0.11
SRSF4-204ENST00000489898 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
SRSF4-204ENST00000489898 TRIM35Q9UPQ4 493 aa15.71■□□□□ 0.11
SRSF4-204ENST00000489898 A0A087WZG4 1122 aa15.7■□□□□ 0.1
SRSF4-204ENST00000489898 NFKBIEO00221 500 aa15.7■□□□□ 0.1
SRSF4-204ENST00000489898 DZIP3Q86Y13 1208 aaKnown RBP15.7■□□□□ 0.1
SRSF4-204ENST00000489898 CCDC24Q8N4L8 307 aa15.7■□□□□ 0.1
SRSF4-204ENST00000489898 RTF1Q92541 710 aaKnown RBP15.7■□□□□ 0.1
SRSF4-204ENST00000489898 PIM2Q9P1W9 311 aa15.7■□□□□ 0.1
SRSF4-204ENST00000489898 RGL2O15211 777 aa15.69■□□□□ 0.1
SRSF4-204ENST00000489898 TMPOP42166 694 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms