RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CC2D2BQ6DHV5 1058 aa6.54□□□□□ -1.36
DEPDC1-204ENST00000489862 PNMA1Q8ND90 353 aa6.54□□□□□ -1.36
DEPDC1-204ENST00000489862 LRRN4Q8WUT4 740 aa6.54□□□□□ -1.36
DEPDC1-204ENST00000489862 PCDHGC4Q9Y5F7 938 aa6.54□□□□□ -1.36
DEPDC1-204ENST00000489862 MSX1P28360 303 aa6.54□□□□□ -1.36
DEPDC1-204ENST00000489862 MBTPS1Q14703 1052 aa6.54□□□□□ -1.36
DEPDC1-204ENST00000489862 IL27Q8NEV9 243 aa6.54□□□□□ -1.36
DEPDC1-204ENST00000489862 OCSTAMPQ9BR26 566 aa6.53□□□□□ -1.36
DEPDC1-204ENST00000489862 KLF15Q9UIH9 416 aa6.53□□□□□ -1.36
DEPDC1-204ENST00000489862 ELOA3CA0A087WX78 387 aaPredicted RBP6.52□□□□□ -1.37
DEPDC1-204ENST00000489862 ELOA3DA6NLF2 546 aaPredicted RBP6.52□□□□□ -1.37
DEPDC1-204ENST00000489862 BRPF1P55201 1214 aaPredicted RBP6.52□□□□□ -1.37
DEPDC1-204ENST00000489862 ELOA3BQ3SY89 546 aa6.52□□□□□ -1.37
DEPDC1-204ENST00000489862 SLC51AQ86UW1 340 aa6.52□□□□□ -1.37
DEPDC1-204ENST00000489862 ELOA3Q8NG57 546 aa6.52□□□□□ -1.37
DEPDC1-204ENST00000489862 CRISPLD1Q9H336 500 aa6.52□□□□□ -1.37
DEPDC1-204ENST00000489862 AP1G2O75843 785 aa6.51□□□□□ -1.37
DEPDC1-204ENST00000489862 ZSCAN10Q96SZ4 725 aaPredicted RBP6.51□□□□□ -1.37
DEPDC1-204ENST00000489862 ESF1Q9H501 851 aaKnown RBP6.51□□□□□ -1.37
DEPDC1-204ENST00000489862 PRR12Q9ULL5 1215 aa6.51□□□□□ -1.37
DEPDC1-204ENST00000489862 ERVK-9P63128 1117 aa6.5□□□□□ -1.37
DEPDC1-204ENST00000489862 PRDM6Q9NQX0 595 aa6.5□□□□□ -1.37
DEPDC1-204ENST00000489862 NR6A1Q15406 480 aa6.5□□□□□ -1.37
DEPDC1-204ENST00000489862 ARHGEF10LQ9HCE6 1279 aa6.5□□□□□ -1.37
DEPDC1-204ENST00000489862 RFC5P40937 340 aa6.49□□□□□ -1.37
DEPDC1-204ENST00000489862 ZNF468Q5VIY5 522 aaPredicted RBP6.49□□□□□ -1.37
DEPDC1-204ENST00000489862 TMEM214Q6NUQ4 689 aaKnown RBP6.49□□□□□ -1.37
DEPDC1-204ENST00000489862 ZCCHC2Q9C0B9 1178 aaKnown RBP6.49□□□□□ -1.37
DEPDC1-204ENST00000489862 ATXN7O15265 892 aaPredicted RBP6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 SSTR4P31391 388 aa6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 PCBP4P57723 403 aaKnown RBP6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 CENPCQ03188 943 aa6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 NLRP8Q86W28 1048 aa6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 EPS8L1Q8TE68 723 aa6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 LENG1Q96BZ8 264 aaPredicted RBP6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 PCMTD1Q96MG8 357 aaPredicted RBP6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 HMX1Q9NP08 348 aaPredicted RBP6.48□□□□□ -1.37
DEPDC1-204ENST00000489862 ESYT1Q9BSJ8 1104 aa6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 GOPCQ9HD26 462 aa6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 OAS3Q9Y6K5 1087 aaKnown RBP6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 M0R082 166 aa6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 USP17L8P0C7I0 530 aa6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 GP2P55259 537 aaKnown RBP6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 ZNF417Q8TAU3 575 aa6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 ZNF587Q96SQ5 575 aaPredicted RBP6.47□□□□□ -1.37
DEPDC1-204ENST00000489862 C4orf17Q53FE4 359 aa6.46□□□□□ -1.38
DEPDC1-204ENST00000489862 TRAPPC3LQ5T215 181 aa6.46□□□□□ -1.38
DEPDC1-204ENST00000489862 RNF20Q5VTR2 975 aa6.46□□□□□ -1.38
DEPDC1-204ENST00000489862 CNKSR1Q969H4 720 aa6.46□□□□□ -1.38
DEPDC1-204ENST00000489862 MAPTP10636 758 aaKnown RBP6.45□□□□□ -1.38
DEPDC1-204ENST00000489862 SELPP16109 830 aa6.45□□□□□ -1.38
DEPDC1-204ENST00000489862 CD33P20138 364 aa6.45□□□□□ -1.38
DEPDC1-204ENST00000489862 SSBP4Q9BWG4 385 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1-204ENST00000489862 GNRH1P01148 92 aa6.44□□□□□ -1.38
DEPDC1-204ENST00000489862 TNP2Q05952 138 aa6.44□□□□□ -1.38
DEPDC1-204ENST00000489862 CD97P48960 835 aa6.43□□□□□ -1.38
DEPDC1-204ENST00000489862 RAC1P63000 192 aa6.43□□□□□ -1.38
DEPDC1-204ENST00000489862 C1orf216Q8TAB5 229 aa6.43□□□□□ -1.38
DEPDC1-204ENST00000489862 DNAAF2Q9NVR5 837 aaKnown RBP6.43□□□□□ -1.38
DEPDC1-204ENST00000489862 USP21Q9UK80 565 aa6.43□□□□□ -1.38
DEPDC1-204ENST00000489862 KHNYNO15037 678 aaKnown RBP6.43□□□□□ -1.38
DEPDC1-204ENST00000489862 COL9A3Q14050 684 aaPredicted RBP6.43□□□□□ -1.38
DEPDC1-204ENST00000489862 DCDC2BA2VCK2 349 aa6.42□□□□□ -1.38
DEPDC1-204ENST00000489862 GIGYF1O75420 1035 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1-204ENST00000489862 TMEM259Q4ZIN3 620 aa6.42□□□□□ -1.38
DEPDC1-204ENST00000489862 TBC1D9Q6ZT07 1266 aa6.42□□□□□ -1.38
DEPDC1-204ENST00000489862 RHBDD1Q8TEB9 315 aa6.42□□□□□ -1.38
DEPDC1-204ENST00000489862 TRIM34Q9BYJ4 488 aa6.42□□□□□ -1.38
DEPDC1-204ENST00000489862 NID1P14543 1247 aa6.41□□□□□ -1.38
DEPDC1-204ENST00000489862 MICALL1Q8N3F8 863 aa6.41□□□□□ -1.38
DEPDC1-204ENST00000489862 CCER1Q8TC90 406 aaPredicted RBP6.41□□□□□ -1.38
DEPDC1-204ENST00000489862 RAB6BQ9NRW1 208 aa6.41□□□□□ -1.38
DEPDC1-204ENST00000489862 ADARB2-AS1A8MUL3 147 aa6.4□□□□□ -1.38
DEPDC1-204ENST00000489862 TRAK2O60296 914 aa6.4□□□□□ -1.38
DEPDC1-204ENST00000489862 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
DEPDC1-204ENST00000489862 OSBPL3Q9H4L5 887 aa6.39□□□□□ -1.39
DEPDC1-204ENST00000489862 MARK1Q9P0L2 795 aa6.39□□□□□ -1.39
DEPDC1-204ENST00000489862 SIN3BO75182 1162 aa6.39□□□□□ -1.39
DEPDC1-204ENST00000489862 IL2RAP01589 272 aa6.39□□□□□ -1.39
DEPDC1-204ENST00000489862 GJD4Q96KN9 370 aaPredicted RBP6.39□□□□□ -1.39
DEPDC1-204ENST00000489862 A0A0A0MRY4 1105 aa6.38□□□□□ -1.39
DEPDC1-204ENST00000489862 SYT9Q86SS6 491 aa6.38□□□□□ -1.39
DEPDC1-204ENST00000489862 XAGE2Q96GT9 111 aa6.38□□□□□ -1.39
DEPDC1-204ENST00000489862 MDFIQ99750 246 aa6.38□□□□□ -1.39
DEPDC1-204ENST00000489862 FHDC1Q9C0D6 1143 aaPredicted RBP6.38□□□□□ -1.39
DEPDC1-204ENST00000489862 KIAA1324LA8MWY0 1029 aaPredicted RBP6.37□□□□□ -1.39
DEPDC1-204ENST00000489862 ALBP02768 609 aa6.37□□□□□ -1.39
DEPDC1-204ENST00000489862 C8AP07357 584 aa6.37□□□□□ -1.39
DEPDC1-204ENST00000489862 FAM157BP0CG42 384 aa6.37□□□□□ -1.39
DEPDC1-204ENST00000489862 PRR23CQ6ZRP0 262 aa6.37□□□□□ -1.39
DEPDC1-204ENST00000489862 FSTP19883 344 aa6.36□□□□□ -1.39
DEPDC1-204ENST00000489862 FBLN7Q53RD9 439 aa6.36□□□□□ -1.39
DEPDC1-204ENST00000489862 ESCO1Q5FWF5 840 aa6.36□□□□□ -1.39
DEPDC1-204ENST00000489862 HRH3Q9Y5N1 445 aa6.36□□□□□ -1.39
DEPDC1-204ENST00000489862 SCTRP47872 440 aa6.36□□□□□ -1.39
DEPDC1-204ENST00000489862 OGFOD2Q6N063 350 aa6.36□□□□□ -1.39
DEPDC1-204ENST00000489862 SHISA2Q6UWI4 295 aa6.36□□□□□ -1.39
DEPDC1-204ENST00000489862 PCDHB9Q9Y5E1 797 aa6.36□□□□□ -1.39
DEPDC1-204ENST00000489862 GJA3Q9Y6H8 435 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms