RNA–Protein interactions for RNA: ENST00000489661.5

PRDM15-213, Transcript of PR/SET domain 15, humanhuman

TSL 3

Gene PRDM15, Length 856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-213ENST00000489661 SRP68Q9UHB9 627 aaKnown RBP19.07■□□□□ 0.64
PRDM15-213ENST00000489661 UTRNP46939 3433 aa19.06■□□□□ 0.64
PRDM15-213ENST00000489661 GRIN3BO60391 1043 aa19.06■□□□□ 0.64
PRDM15-213ENST00000489661 TAF7Q15545 349 aaPredicted RBP19.06■□□□□ 0.64
PRDM15-213ENST00000489661 ZBTB1Q9Y2K1 713 aa19.06■□□□□ 0.64
PRDM15-213ENST00000489661 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
PRDM15-213ENST00000489661 COL15A1P39059 1388 aa19.06■□□□□ 0.64
PRDM15-213ENST00000489661 PNISRQ8TF01 805 aaKnown RBP19.05■□□□□ 0.64
PRDM15-213ENST00000489661 PLEKHF1Q96S99 279 aa19.05■□□□□ 0.64
PRDM15-213ENST00000489661 UBR2Q8IWV8 1755 aa19.05■□□□□ 0.64
PRDM15-213ENST00000489661 SIPA1L3O60292 1781 aaPredicted RBP19.04■□□□□ 0.64
PRDM15-213ENST00000489661 USPL1Q5W0Q7 1092 aa19.04■□□□□ 0.64
PRDM15-213ENST00000489661 SNRPA1P09661 255 aaKnown RBP19.03■□□□□ 0.64
PRDM15-213ENST00000489661 LMOD3Q0VAK6 560 aa19.03■□□□□ 0.64
PRDM15-213ENST00000489661 FKBP8Q14318 412 aa19.03■□□□□ 0.64
PRDM15-213ENST00000489661 PRKRIP1Q9H875 184 aaPredicted RBP19.03■□□□□ 0.64
PRDM15-213ENST00000489661 NARFQ9UHQ1 456 aa19.03■□□□□ 0.64
PRDM15-213ENST00000489661 GOLGB1Q14789 3259 aaKnown RBP19.03■□□□□ 0.64
PRDM15-213ENST00000489661 C4AP0C0L4 1744 aa19.03■□□□□ 0.64
PRDM15-213ENST00000489661 KCNQ3O43525 872 aa19.02■□□□□ 0.64
PRDM15-213ENST00000489661 RIPK4P57078 832 aa19.01■□□□□ 0.63
PRDM15-213ENST00000489661 IL6STP40189 918 aaPredicted RBP19■□□□□ 0.63
PRDM15-213ENST00000489661 TGFB2P61812 414 aa19■□□□□ 0.63
PRDM15-213ENST00000489661 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
PRDM15-213ENST00000489661 MIS18AQ9NYP9 233 aa18.99■□□□□ 0.63
PRDM15-213ENST00000489661 A1BGP04217 495 aa18.98■□□□□ 0.63
PRDM15-213ENST00000489661 YBX3P16989 372 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRDM15-213ENST00000489661 EIF5P55010 431 aaKnown RBP18.98■□□□□ 0.63
PRDM15-213ENST00000489661 CCDC146Q8IYE0 955 aa18.98■□□□□ 0.63
PRDM15-213ENST00000489661 RUNDC1Q96C34 613 aa18.98■□□□□ 0.63
PRDM15-213ENST00000489661 WWC3Q9ULE0 1092 aa18.98■□□□□ 0.63
PRDM15-213ENST00000489661 THUMPD2Q9BTF0 503 aaKnown RBP18.97■□□□□ 0.63
PRDM15-213ENST00000489661 DLG5Q8TDM6 1919 aa18.96■□□□□ 0.63
PRDM15-213ENST00000489661 TMPOP42166 694 aaKnown RBP18.96■□□□□ 0.63
PRDM15-213ENST00000489661 NEUROD2Q15784 382 aa18.96■□□□□ 0.63
PRDM15-213ENST00000489661 TSPYL4Q9UJ04 414 aa18.96■□□□□ 0.63
PRDM15-213ENST00000489661 USP16Q9Y5T5 823 aa18.96■□□□□ 0.63
PRDM15-213ENST00000489661 C10orf71Q711Q0 1435 aa18.96■□□□□ 0.63
PRDM15-213ENST00000489661 CHD4Q14839 1912 aa18.96■□□□□ 0.63
PRDM15-213ENST00000489661 A0A0G2JLW4 131 aa18.95■□□□□ 0.62
PRDM15-213ENST00000489661 POLRMTO00411 1230 aaKnown RBP18.95■□□□□ 0.62
PRDM15-213ENST00000489661 NPHP1O15259 732 aa18.95■□□□□ 0.62
PRDM15-213ENST00000489661 TM4SF1P30408 202 aa18.95■□□□□ 0.62
PRDM15-213ENST00000489661 DDR1Q08345 913 aa18.95■□□□□ 0.62
PRDM15-213ENST00000489661 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
PRDM15-213ENST00000489661 NFIXQ14938 502 aa18.94■□□□□ 0.62
PRDM15-213ENST00000489661 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
PRDM15-213ENST00000489661 DZIP3Q86Y13 1208 aaKnown RBP18.94■□□□□ 0.62
PRDM15-213ENST00000489661 ADAMTS8Q9UP79 889 aa18.94■□□□□ 0.62
PRDM15-213ENST00000489661 RRP7AQ9Y3A4 280 aaKnown RBP18.94■□□□□ 0.62
PRDM15-213ENST00000489661 PRAMEF22A3QJZ6 481 aa18.93■□□□□ 0.62
PRDM15-213ENST00000489661 BCS1LQ9Y276 419 aa18.93■□□□□ 0.62
PRDM15-213ENST00000489661 ZNF652Q9Y2D9 606 aa18.93■□□□□ 0.62
PRDM15-213ENST00000489661 PXDNLA1KZ92 1463 aa18.92■□□□□ 0.62
PRDM15-213ENST00000489661 ANP32CO43423 234 aa18.92■□□□□ 0.62
PRDM15-213ENST00000489661 SERPINB2P05120 415 aa18.92■□□□□ 0.62
PRDM15-213ENST00000489661 DPEP1P16444 411 aa18.92■□□□□ 0.62
PRDM15-213ENST00000489661 KIF13BQ9NQT8 1826 aa18.91■□□□□ 0.62
PRDM15-213ENST00000489661 PIP4K2AP48426 406 aaPredicted RBP18.91■□□□□ 0.62
PRDM15-213ENST00000489661 EIF4A1P60842 406 aaKnown RBP18.91■□□□□ 0.62
PRDM15-213ENST00000489661 SETDB2Q96T68 719 aa18.91■□□□□ 0.62
PRDM15-213ENST00000489661 BCL2L12Q9HB09 334 aa18.91■□□□□ 0.62
PRDM15-213ENST00000489661 BABAM1Q9NWV8 329 aa18.91■□□□□ 0.62
PRDM15-213ENST00000489661 PIM2Q9P1W9 311 aa18.91■□□□□ 0.62
PRDM15-213ENST00000489661 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
PRDM15-213ENST00000489661 GIGYF1O75420 1035 aaPredicted RBP18.89■□□□□ 0.61
PRDM15-213ENST00000489661 TBC1D9BQ66K14 1250 aa18.89■□□□□ 0.61
PRDM15-213ENST00000489661 ZNF784Q8NCA9 323 aaPredicted RBP18.89■□□□□ 0.61
PRDM15-213ENST00000489661 CARMIL3Q8ND23 1372 aa18.89■□□□□ 0.61
PRDM15-213ENST00000489661 CAMTA2O94983 1202 aa18.88■□□□□ 0.61
PRDM15-213ENST00000489661 DALRD3Q5D0E6 543 aaKnown RBP18.88■□□□□ 0.61
PRDM15-213ENST00000489661 N4BP2Q86UW6 1770 aaPredicted RBP18.88■□□□□ 0.61
PRDM15-213ENST00000489661 CLEC4GQ6UXB4 293 aa18.87■□□□□ 0.61
PRDM15-213ENST00000489661 KIF6Q6ZMV9 814 aa18.87■□□□□ 0.61
PRDM15-213ENST00000489661 KDM3BQ7LBC6 1761 aa18.87■□□□□ 0.61
PRDM15-213ENST00000489661 NGEFQ8N5V2 710 aa18.87■□□□□ 0.61
PRDM15-213ENST00000489661 SCN7AQ01118 1682 aa18.86■□□□□ 0.61
PRDM15-213ENST00000489661 CHRNA5P30532 468 aa18.86■□□□□ 0.61
PRDM15-213ENST00000489661 ST5P78524 1137 aa18.86■□□□□ 0.61
PRDM15-213ENST00000489661 ARHGAP27Q6ZUM4 889 aa18.86■□□□□ 0.61
PRDM15-213ENST00000489661 CNBD1Q8NA66 436 aa18.86■□□□□ 0.61
PRDM15-213ENST00000489661 NBPF26B4DH59 902 aa18.85■□□□□ 0.61
PRDM15-213ENST00000489661 H0YIN7 160 aa18.85■□□□□ 0.61
PRDM15-213ENST00000489661 MYL6BP14649 208 aa18.85■□□□□ 0.61
PRDM15-213ENST00000489661 CALD1Q05682 793 aaKnown RBP18.85■□□□□ 0.61
PRDM15-213ENST00000489661 NBPF10Q6P3W6 841 aaKnown RBP18.85■□□□□ 0.61
PRDM15-213ENST00000489661 C2CD5Q86YS7 1000 aa18.85■□□□□ 0.61
PRDM15-213ENST00000489661 NBPF15Q8N660 670 aa18.85■□□□□ 0.61
PRDM15-213ENST00000489661 PDZRN3Q9UPQ7 1066 aa18.85■□□□□ 0.61
PRDM15-213ENST00000489661 LAMB4A4D0S4 1761 aa18.85■□□□□ 0.61
PRDM15-213ENST00000489661 EIF2S2P20042 333 aaKnown RBP18.84■□□□□ 0.61
PRDM15-213ENST00000489661 PDE6BP35913 854 aa18.84■□□□□ 0.61
PRDM15-213ENST00000489661 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
PRDM15-213ENST00000489661 ERBB4Q15303 1308 aa18.83■□□□□ 0.61
PRDM15-213ENST00000489661 RGL2O15211 777 aa18.83■□□□□ 0.6
PRDM15-213ENST00000489661 TRIM35Q9UPQ4 493 aa18.83■□□□□ 0.6
PRDM15-213ENST00000489661 NIP7Q9Y221 180 aaKnown RBP eCLIP18.83■□□□□ 0.6
PRDM15-213ENST00000489661 AFDNP55196 1824 aaKnown RBP18.82■□□□□ 0.6
PRDM15-213ENST00000489661 APAF1O14727 1248 aa18.82■□□□□ 0.6
PRDM15-213ENST00000489661 KCNA3P22001 575 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms