RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 AGBL1Q96MI9 1066 aa11.29□□□□□ -0.6
SMC6-209ENST00000489535 SPOCK3Q9BQ16 436 aa11.29□□□□□ -0.6
SMC6-209ENST00000489535 DENND4BO75064 1496 aaPredicted RBP11.29□□□□□ -0.6
SMC6-209ENST00000489535 PZPP20742 1482 aa11.29□□□□□ -0.6
SMC6-209ENST00000489535 TEX14Q8IWB6 1497 aa11.29□□□□□ -0.6
SMC6-209ENST00000489535 CFAP65Q6ZU64 1925 aaKnown RBP11.29□□□□□ -0.6
SMC6-209ENST00000489535 ERBINQ96RT1 1412 aa11.28□□□□□ -0.6
SMC6-209ENST00000489535 MAP3K10Q02779 954 aa11.28□□□□□ -0.6
SMC6-209ENST00000489535 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
SMC6-209ENST00000489535 AFAP1Q8N556 730 aa11.28□□□□□ -0.6
SMC6-209ENST00000489535 RNF217Q8TC41 542 aa11.28□□□□□ -0.6
SMC6-209ENST00000489535 DCAF5Q96JK2 942 aa11.28□□□□□ -0.6
SMC6-209ENST00000489535 PSMG3-AS1Q96PY0 264 aa11.28□□□□□ -0.6
SMC6-209ENST00000489535 INSM2Q96T92 566 aaPredicted RBP11.28□□□□□ -0.6
SMC6-209ENST00000489535 QPCTQ16769 361 aa11.27□□□□□ -0.61
SMC6-209ENST00000489535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMC6-209ENST00000489535 FAM135AQ9P2D6 1515 aa11.26□□□□□ -0.61
SMC6-209ENST00000489535 DIP2CQ9Y2E4 1556 aa11.26□□□□□ -0.61
SMC6-209ENST00000489535 RELBQ01201 579 aa11.26□□□□□ -0.61
SMC6-209ENST00000489535 PARP9Q8IXQ6 854 aa11.26□□□□□ -0.61
SMC6-209ENST00000489535 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
SMC6-209ENST00000489535 RNF17Q9BXT8 1623 aaKnown RBP11.26□□□□□ -0.61
SMC6-209ENST00000489535 E9PCH4 1651 aa11.26□□□□□ -0.61
SMC6-209ENST00000489535 SPHKAPQ2M3C7 1700 aa11.26□□□□□ -0.61
SMC6-209ENST00000489535 MAGI2Q86UL8 1455 aa11.25□□□□□ -0.61
SMC6-209ENST00000489535 TET3O43151 1660 aa11.25□□□□□ -0.61
SMC6-209ENST00000489535 PROCP04070 461 aa11.25□□□□□ -0.61
SMC6-209ENST00000489535 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
SMC6-209ENST00000489535 CUEDC1Q9NWM3 386 aaPredicted RBP11.25□□□□□ -0.61
SMC6-209ENST00000489535 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
SMC6-209ENST00000489535 MLH3Q9UHC1 1453 aa11.25□□□□□ -0.61
SMC6-209ENST00000489535 ZMYM4Q5VZL5 1548 aa11.25□□□□□ -0.61
SMC6-209ENST00000489535 KCTD15Q96SI1 283 aaPredicted RBP11.24□□□□□ -0.61
SMC6-209ENST00000489535 POLMQ9NP87 494 aaPredicted RBP11.24□□□□□ -0.61
SMC6-209ENST00000489535 CNTNAP5Q8WYK1 1306 aa11.24□□□□□ -0.61
SMC6-209ENST00000489535 MROH1Q8NDA8 1641 aa11.24□□□□□ -0.61
SMC6-209ENST00000489535 LILRB3O75022 631 aa11.23□□□□□ -0.61
SMC6-209ENST00000489535 ZMYND10O75800 440 aa11.23□□□□□ -0.61
SMC6-209ENST00000489535 NUP155O75694 1391 aa11.22□□□□□ -0.61
SMC6-209ENST00000489535 PRDM15P57071 1507 aaPredicted RBP11.22□□□□□ -0.61
SMC6-209ENST00000489535 KRTAP1-3Q8IUG1 177 aa11.22□□□□□ -0.61
SMC6-209ENST00000489535 SIN3AQ96ST3 1273 aa11.22□□□□□ -0.61
SMC6-209ENST00000489535 ENAMQ9NRM1 1142 aa11.22□□□□□ -0.61
SMC6-209ENST00000489535 A2MP01023 1474 aa11.21□□□□□ -0.61
SMC6-209ENST00000489535 NUTM2BA6NNL0 878 aaPredicted RBP11.21□□□□□ -0.61
SMC6-209ENST00000489535 PHF20L1A8MW92 1017 aa11.21□□□□□ -0.61
SMC6-209ENST00000489535 NUTM2EB1AL46 878 aaPredicted RBP11.21□□□□□ -0.61
SMC6-209ENST00000489535 DHX9Q08211 1270 aaKnown RBP11.21□□□□□ -0.61
SMC6-209ENST00000489535 NEUROD1Q13562 356 aa11.21□□□□□ -0.61
SMC6-209ENST00000489535 TUSC1Q2TAM9 212 aa11.21□□□□□ -0.61
SMC6-209ENST00000489535 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
SMC6-209ENST00000489535 NUTM2AQ8IVF1 878 aaPredicted RBP11.21□□□□□ -0.61
SMC6-209ENST00000489535 ZC3H13Q5T200 1668 aaKnown RBP11.2□□□□□ -0.62
SMC6-209ENST00000489535 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
SMC6-209ENST00000489535 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
SMC6-209ENST00000489535 INTS6LQ5JSJ4 861 aaKnown RBP11.2□□□□□ -0.62
SMC6-209ENST00000489535 FOXD4L5Q5VV16 416 aaPredicted RBP11.2□□□□□ -0.62
SMC6-209ENST00000489535 ZNF395Q9H8N7 513 aaPredicted RBP11.2□□□□□ -0.62
SMC6-209ENST00000489535 KIF1BO60333 1816 aa11.2□□□□□ -0.62
SMC6-209ENST00000489535 DHX29Q7Z478 1369 aaKnown RBP11.19□□□□□ -0.62
SMC6-209ENST00000489535 RAPGEF3O95398 923 aa11.19□□□□□ -0.62
SMC6-209ENST00000489535 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
SMC6-209ENST00000489535 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
SMC6-209ENST00000489535 SLC10A4Q96EP9 437 aa11.19□□□□□ -0.62
SMC6-209ENST00000489535 CDV3Q9UKY7 258 aaKnown RBP11.19□□□□□ -0.62
SMC6-209ENST00000489535 SIGLEC1Q9BZZ2 1709 aa11.18□□□□□ -0.62
SMC6-209ENST00000489535 CAMSAP1Q5T5Y3 1602 aa11.18□□□□□ -0.62
SMC6-209ENST00000489535 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
SMC6-209ENST00000489535 ANKRD30BQ9BXX2 1392 aa11.17□□□□□ -0.62
SMC6-209ENST00000489535 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
SMC6-209ENST00000489535 ARHGAP9Q9BRR9 750 aa11.17□□□□□ -0.62
SMC6-209ENST00000489535 ARHGEF40Q8TER5 1519 aa11.17□□□□□ -0.62
SMC6-209ENST00000489535 RPRD2Q5VT52 1461 aaKnown RBP11.17□□□□□ -0.62
SMC6-209ENST00000489535 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
SMC6-209ENST00000489535 REREQ9P2R6 1566 aa11.16□□□□□ -0.62
SMC6-209ENST00000489535 BEND7Q8N7W2 519 aaPredicted RBP11.16□□□□□ -0.62
SMC6-209ENST00000489535 MBIPQ9NS73 344 aa11.16□□□□□ -0.62
SMC6-209ENST00000489535 YEATS2Q9ULM3 1422 aa11.16□□□□□ -0.62
SMC6-209ENST00000489535 KANK1Q14678 1352 aa11.15□□□□□ -0.63
SMC6-209ENST00000489535 EFCAB6Q5THR3 1501 aa11.14□□□□□ -0.63
SMC6-209ENST00000489535 CLTCQ00610 1675 aaKnown RBP11.14□□□□□ -0.63
SMC6-209ENST00000489535 KIF3BO15066 747 aa11.14□□□□□ -0.63
SMC6-209ENST00000489535 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
SMC6-209ENST00000489535 ZNF837Q96EG3 531 aaPredicted RBP11.14□□□□□ -0.63
SMC6-209ENST00000489535 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
SMC6-209ENST00000489535 ADH1AP07327 375 aa11.13□□□□□ -0.63
SMC6-209ENST00000489535 GALNT6Q8NCL4 622 aa11.13□□□□□ -0.63
SMC6-209ENST00000489535 TMPRSS4Q9NRS4 437 aa11.13□□□□□ -0.63
SMC6-209ENST00000489535 MYO5BQ9ULV0 1848 aa11.13□□□□□ -0.63
SMC6-209ENST00000489535 CLTCL1P53675 1640 aa11.13□□□□□ -0.63
SMC6-209ENST00000489535 COL17A1Q9UMD9 1497 aaPredicted RBP11.12□□□□□ -0.63
SMC6-209ENST00000489535 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
SMC6-209ENST00000489535 BCRP11274 1271 aa11.12□□□□□ -0.63
SMC6-209ENST00000489535 LYSMD3Q7Z3D4 306 aa11.12□□□□□ -0.63
SMC6-209ENST00000489535 PODNQ7Z5L7 613 aa11.12□□□□□ -0.63
SMC6-209ENST00000489535 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
SMC6-209ENST00000489535 LMTK2Q8IWU2 1503 aa11.12□□□□□ -0.63
SMC6-209ENST00000489535 ATP10AO60312 1499 aa11.12□□□□□ -0.63
SMC6-209ENST00000489535 MROH2AA6NES4 1674 aa11.11□□□□□ -0.63
SMC6-209ENST00000489535 PREX1Q8TCU6 1659 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms