RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 RGS12O14924 1447 aa12.7□□□□□ -0.38
TNRC6B-208ENST00000489500 TULP4Q9NRJ4 1543 aa12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 ARHGEF28Q8N1W1 1705 aaKnown RBP12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 TNFRSF10AO00220 468 aa12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 GDF9O60383 454 aa12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 KDM4AO75164 1064 aa12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 UNC5CLQ8IV45 518 aa12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 HLA-CQ95604 372 aa12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 ATRNO75882 1429 aa12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 USP32Q8NFA0 1604 aa12.69□□□□□ -0.38
TNRC6B-208ENST00000489500 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
TNRC6B-208ENST00000489500 NWD2Q9ULI1 1742 aa12.68□□□□□ -0.38
TNRC6B-208ENST00000489500 PRR20EP86478 221 aa12.67□□□□□ -0.38
TNRC6B-208ENST00000489500 PRR20CP86479 221 aa12.67□□□□□ -0.38
TNRC6B-208ENST00000489500 PRR20DP86480 221 aa12.67□□□□□ -0.38
TNRC6B-208ENST00000489500 PRR20BP86481 221 aa12.67□□□□□ -0.38
TNRC6B-208ENST00000489500 PRR20AP86496 221 aa12.67□□□□□ -0.38
TNRC6B-208ENST00000489500 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
TNRC6B-208ENST00000489500 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
TNRC6B-208ENST00000489500 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
TNRC6B-208ENST00000489500 FAM217BQ9NTX9 383 aaPredicted RBP12.66□□□□□ -0.38
TNRC6B-208ENST00000489500 MSS51Q4VC12 460 aa12.65□□□□□ -0.38
TNRC6B-208ENST00000489500 NUDT16Q96DE0 195 aaKnown RBP12.65□□□□□ -0.38
TNRC6B-208ENST00000489500 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
TNRC6B-208ENST00000489500 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.38
TNRC6B-208ENST00000489500 PLCH1Q4KWH8 1693 aa12.64□□□□□ -0.39
TNRC6B-208ENST00000489500 SLIT2O94813 1529 aa12.64□□□□□ -0.39
TNRC6B-208ENST00000489500 CLCN1P35523 988 aa12.64□□□□□ -0.39
TNRC6B-208ENST00000489500 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
TNRC6B-208ENST00000489500 PKD2L1Q9P0L9 805 aa12.64□□□□□ -0.39
TNRC6B-208ENST00000489500 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
TNRC6B-208ENST00000489500 RPIAP49247 311 aa12.63□□□□□ -0.39
TNRC6B-208ENST00000489500 FOXC1Q12948 553 aa12.63□□□□□ -0.39
TNRC6B-208ENST00000489500 SF3B2Q13435 895 aaKnown RBP12.63□□□□□ -0.39
TNRC6B-208ENST00000489500 VPS72Q15906 364 aa12.63□□□□□ -0.39
TNRC6B-208ENST00000489500 Q3C1V9 767 aa12.63□□□□□ -0.39
TNRC6B-208ENST00000489500 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
TNRC6B-208ENST00000489500 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
TNRC6B-208ENST00000489500 ALS2Q96Q42 1657 aa12.62□□□□□ -0.39
TNRC6B-208ENST00000489500 HOXA2O43364 376 aa12.62□□□□□ -0.39
TNRC6B-208ENST00000489500 GUCA2AQ02747 115 aa12.62□□□□□ -0.39
TNRC6B-208ENST00000489500 BARGINQ6ZT62 677 aa12.62□□□□□ -0.39
TNRC6B-208ENST00000489500 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
TNRC6B-208ENST00000489500 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
TNRC6B-208ENST00000489500 ZMYND10O75800 440 aa12.61□□□□□ -0.39
TNRC6B-208ENST00000489500 USP46P62068 366 aa12.61□□□□□ -0.39
TNRC6B-208ENST00000489500 SRPK2P78362 688 aaKnown RBP12.61□□□□□ -0.39
TNRC6B-208ENST00000489500 MYT1Q01538 1121 aa12.61□□□□□ -0.39
TNRC6B-208ENST00000489500 PKDCCQ504Y2 493 aa12.61□□□□□ -0.39
TNRC6B-208ENST00000489500 PRR36Q9H6K5 1346 aa12.61□□□□□ -0.39
TNRC6B-208ENST00000489500 CENPJQ9HC77 1338 aaPredicted RBP12.61□□□□□ -0.39
TNRC6B-208ENST00000489500 ATP7BP35670 1465 aa12.6□□□□□ -0.39
TNRC6B-208ENST00000489500 RALGAPBQ86X10 1494 aa12.6□□□□□ -0.39
TNRC6B-208ENST00000489500 DGAT1O75907 488 aa12.6□□□□□ -0.39
TNRC6B-208ENST00000489500 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
TNRC6B-208ENST00000489500 USB1Q9BQ65 265 aaKnown RBP12.6□□□□□ -0.39
TNRC6B-208ENST00000489500 MMP16P51512 607 aa12.59□□□□□ -0.39
TNRC6B-208ENST00000489500 NEUROD1Q13562 356 aa12.59□□□□□ -0.39
TNRC6B-208ENST00000489500 BRWD3Q6RI45 1802 aa12.58□□□□□ -0.4
TNRC6B-208ENST00000489500 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
TNRC6B-208ENST00000489500 FAM187AA6NFU0 413 aa12.58□□□□□ -0.4
TNRC6B-208ENST00000489500 CD2BP2O95400 341 aaKnown RBP12.58□□□□□ -0.4
TNRC6B-208ENST00000489500 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
TNRC6B-208ENST00000489500 PRDM11Q9NQV5 511 aa12.58□□□□□ -0.4
TNRC6B-208ENST00000489500 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
TNRC6B-208ENST00000489500 ACEP12821 1306 aa12.58□□□□□ -0.4
TNRC6B-208ENST00000489500 QRICH2Q9H0J4 1663 aa12.57□□□□□ -0.4
TNRC6B-208ENST00000489500 BRD4O60885 1362 aaPredicted RBP12.57□□□□□ -0.4
TNRC6B-208ENST00000489500 GLI3P10071 1580 aa12.57□□□□□ -0.4
TNRC6B-208ENST00000489500 PLEKHG3A1L390 1219 aa12.57□□□□□ -0.4
TNRC6B-208ENST00000489500 NBPF1Q3BBV0 1214 aa12.57□□□□□ -0.4
TNRC6B-208ENST00000489500 NBPF8Q3BBV2 869 aa12.57□□□□□ -0.4
TNRC6B-208ENST00000489500 L3MBTL2Q969R5 705 aa12.57□□□□□ -0.4
TNRC6B-208ENST00000489500 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
TNRC6B-208ENST00000489500 EVA1CP58658 441 aa12.56□□□□□ -0.4
TNRC6B-208ENST00000489500 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
TNRC6B-208ENST00000489500 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
TNRC6B-208ENST00000489500 ABTB2Q8N961 1025 aa12.56□□□□□ -0.4
TNRC6B-208ENST00000489500 SYMPKQ92797 1274 aaKnown RBP12.56□□□□□ -0.4
TNRC6B-208ENST00000489500 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
TNRC6B-208ENST00000489500 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
TNRC6B-208ENST00000489500 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
TNRC6B-208ENST00000489500 DXOO77932 396 aaKnown RBP12.55□□□□□ -0.4
TNRC6B-208ENST00000489500 SSTR3P32745 418 aaPredicted RBP12.55□□□□□ -0.4
TNRC6B-208ENST00000489500 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
TNRC6B-208ENST00000489500 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
TNRC6B-208ENST00000489500 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
TNRC6B-208ENST00000489500 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
TNRC6B-208ENST00000489500 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
TNRC6B-208ENST00000489500 ZBTB24O43167 697 aaPredicted RBP12.54□□□□□ -0.4
TNRC6B-208ENST00000489500 NUTM1Q86Y26 1132 aa12.54□□□□□ -0.4
TNRC6B-208ENST00000489500 PHRF1Q9P1Y6 1649 aaKnown RBP12.54□□□□□ -0.4
TNRC6B-208ENST00000489500 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
TNRC6B-208ENST00000489500 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
TNRC6B-208ENST00000489500 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
TNRC6B-208ENST00000489500 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
TNRC6B-208ENST00000489500 NUTM2GQ5VZR2 741 aa12.51□□□□□ -0.41
TNRC6B-208ENST00000489500 STRN4Q9NRL3 753 aa12.51□□□□□ -0.41
TNRC6B-208ENST00000489500 TOR4AQ9NXH8 423 aa12.51□□□□□ -0.41
TNRC6B-208ENST00000489500 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms