RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
UFD1-209ENST00000489406 C2CD5Q86YS7 1000 aa21.31■■□□□ 1
UFD1-209ENST00000489406 TAF1DQ9H5J8 278 aaPredicted RBP21.31■■□□□ 1
UFD1-209ENST00000489406 ZNF219Q9P2Y4 722 aaPredicted RBP21.31■■□□□ 1
UFD1-209ENST00000489406 IQCA1LA6NCM1 817 aa21.3■■□□□ 1
UFD1-209ENST00000489406 CRKLP46109 303 aaKnown RBP21.3■■□□□ 1
UFD1-209ENST00000489406 ABT1Q9ULW3 272 aaKnown RBP21.3■■□□□ 1
UFD1-209ENST00000489406 CLEC11AQ9Y240 323 aa21.3■■□□□ 1
UFD1-209ENST00000489406 GGNBP2Q9H3C7 697 aa21.29■■□□□ 1
UFD1-209ENST00000489406 FLT4P35916 1363 aa21.28■■□□□ 1
UFD1-209ENST00000489406 DICER1Q9UPY3 1922 aaKnown RBP21.28■■□□□ 1
UFD1-209ENST00000489406 H0YIN7 160 aa21.28■■□□□ 1
UFD1-209ENST00000489406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.28■■□□□ 1
UFD1-209ENST00000489406 DLEC1Q9Y238 1755 aa21.28■■□□□ 1
UFD1-209ENST00000489406 C21orf2O43822 256 aa21.27■■□□□ 1
UFD1-209ENST00000489406 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
UFD1-209ENST00000489406 ZPR1O75312 459 aa21.26■□□□□ 0.99
UFD1-209ENST00000489406 GRM1Q13255 1194 aa21.26■□□□□ 0.99
UFD1-209ENST00000489406 PAXIP1Q6ZW49 1069 aaPredicted RBP21.26■□□□□ 0.99
UFD1-209ENST00000489406 FYB1O15117 783 aa21.25■□□□□ 0.99
UFD1-209ENST00000489406 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
UFD1-209ENST00000489406 NFIXQ14938 502 aa21.25■□□□□ 0.99
UFD1-209ENST00000489406 AFDNP55196 1824 aaKnown RBP21.25■□□□□ 0.99
UFD1-209ENST00000489406 SERPINB2P05120 415 aa21.24■□□□□ 0.99
UFD1-209ENST00000489406 PRPF38BQ5VTL8 546 aaKnown RBP21.24■□□□□ 0.99
UFD1-209ENST00000489406 CNTROBQ8N137 903 aa21.24■□□□□ 0.99
UFD1-209ENST00000489406 CAPNS2Q96L46 248 aa21.24■□□□□ 0.99
UFD1-209ENST00000489406 GPR101Q96P66 508 aaPredicted RBP21.24■□□□□ 0.99
UFD1-209ENST00000489406 NCAPD2Q15021 1401 aa21.23■□□□□ 0.99
UFD1-209ENST00000489406 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
UFD1-209ENST00000489406 DGKZQ13574 1117 aa21.23■□□□□ 0.99
UFD1-209ENST00000489406 MAP1SQ66K74 1059 aaPredicted RBP21.23■□□□□ 0.99
UFD1-209ENST00000489406 ZNF622Q969S3 477 aaKnown RBP eCLIP21.23■□□□□ 0.99
UFD1-209ENST00000489406 L3MBTL3Q96JM7 780 aaPredicted RBP21.23■□□□□ 0.99
UFD1-209ENST00000489406 TAOK3Q9H2K8 898 aa21.22■□□□□ 0.99
UFD1-209ENST00000489406 SCN4AP35499 1836 aa21.22■□□□□ 0.99
UFD1-209ENST00000489406 CYP4F22Q6NT55 531 aa21.21■□□□□ 0.99
UFD1-209ENST00000489406 PUS7Q96PZ0 661 aaKnown RBP21.21■□□□□ 0.99
UFD1-209ENST00000489406 KIF24Q5T7B8 1368 aa21.21■□□□□ 0.99
UFD1-209ENST00000489406 CARMIL3Q8ND23 1372 aa21.21■□□□□ 0.99
UFD1-209ENST00000489406 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
UFD1-209ENST00000489406 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
UFD1-209ENST00000489406 ECE1P42892 770 aa21.2■□□□□ 0.98
UFD1-209ENST00000489406 INTS5Q6P9B9 1019 aaKnown RBP21.2■□□□□ 0.98
UFD1-209ENST00000489406 EMILIN1Q9Y6C2 1016 aa21.2■□□□□ 0.98
UFD1-209ENST00000489406 LTBP3Q9NS15 1303 aa21.2■□□□□ 0.98
UFD1-209ENST00000489406 THSD7BQ9C0I4 1608 aa21.19■□□□□ 0.98
UFD1-209ENST00000489406 NRXN2Q9P2S2 1712 aa21.19■□□□□ 0.98
UFD1-209ENST00000489406 SOX10P56693 466 aa21.19■□□□□ 0.98
UFD1-209ENST00000489406 EYA1Q99502 592 aa21.19■□□□□ 0.98
UFD1-209ENST00000489406 HACL1Q9UJ83 578 aa21.19■□□□□ 0.98
UFD1-209ENST00000489406 ADAMTS7Q9UKP4 1686 aa21.18■□□□□ 0.98
UFD1-209ENST00000489406 EPHX2P34913 555 aa21.18■□□□□ 0.98
UFD1-209ENST00000489406 CABP4P57796 275 aa21.18■□□□□ 0.98
UFD1-209ENST00000489406 CASP8AP2Q9UKL3 1982 aa21.17■□□□□ 0.98
UFD1-209ENST00000489406 PPM1GO15355 546 aaPredicted RBP21.17■□□□□ 0.98
UFD1-209ENST00000489406 CARD11Q9BXL7 1154 aa21.17■□□□□ 0.98
UFD1-209ENST00000489406 DDX21Q9NR30 783 aaKnown RBP eCLIP21.17■□□□□ 0.98
UFD1-209ENST00000489406 LTBP1Q14766 1721 aa21.16■□□□□ 0.98
UFD1-209ENST00000489406 AOC2O75106 756 aa21.16■□□□□ 0.98
UFD1-209ENST00000489406 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
UFD1-209ENST00000489406 FMR1Q06787 632 aaKnown RBP eCLIP21.14■□□□□ 0.97
UFD1-209ENST00000489406 PNMA8AQ86V59 439 aaPredicted RBP21.14■□□□□ 0.97
UFD1-209ENST00000489406 NARFQ9UHQ1 456 aa21.14■□□□□ 0.97
UFD1-209ENST00000489406 SOS1Q07889 1333 aaPredicted RBP21.13■□□□□ 0.97
UFD1-209ENST00000489406 BCL2L12Q9HB09 334 aa21.13■□□□□ 0.97
UFD1-209ENST00000489406 TJP1Q07157 1748 aa21.12■□□□□ 0.97
UFD1-209ENST00000489406 ZNF541Q9H0D2 1346 aa21.12■□□□□ 0.97
UFD1-209ENST00000489406 HSP90AB1P08238 724 aaKnown RBP21.12■□□□□ 0.97
UFD1-209ENST00000489406 MAP2K2P36507 400 aa21.12■□□□□ 0.97
UFD1-209ENST00000489406 BICDL1Q6ZP65 573 aa21.12■□□□□ 0.97
UFD1-209ENST00000489406 RNF123Q5XPI4 1314 aa21.11■□□□□ 0.97
UFD1-209ENST00000489406 CA12O43570 354 aa21.11■□□□□ 0.97
UFD1-209ENST00000489406 CCDC24Q8N4L8 307 aa21.11■□□□□ 0.97
UFD1-209ENST00000489406 PDE6BP35913 854 aa21.1■□□□□ 0.97
UFD1-209ENST00000489406 DNAJC10Q8IXB1 793 aa21.1■□□□□ 0.97
UFD1-209ENST00000489406 NFATC2IPQ8NCF5 419 aa21.09■□□□□ 0.97
UFD1-209ENST00000489406 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
UFD1-209ENST00000489406 SIN3AQ96ST3 1273 aa21.08■□□□□ 0.97
UFD1-209ENST00000489406 BRIP1Q9BX63 1249 aa21.08■□□□□ 0.97
UFD1-209ENST00000489406 ANKRD31Q8N7Z5 1873 aa21.07■□□□□ 0.96
UFD1-209ENST00000489406 TLL2Q9Y6L7 1015 aa21.07■□□□□ 0.96
UFD1-209ENST00000489406 COL15A1P39059 1388 aa21.07■□□□□ 0.96
UFD1-209ENST00000489406 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
UFD1-209ENST00000489406 WASHC2AQ641Q2 1341 aa21.06■□□□□ 0.96
UFD1-209ENST00000489406 SOGA3Q5TF21 947 aa21.06■□□□□ 0.96
UFD1-209ENST00000489406 CST9Q5W186 159 aa21.06■□□□□ 0.96
UFD1-209ENST00000489406 PRPF40BQ6NWY9 871 aaKnown RBP21.06■□□□□ 0.96
UFD1-209ENST00000489406 SLX4Q8IY92 1834 aa21.06■□□□□ 0.96
UFD1-209ENST00000489406 CNKSR1Q969H4 720 aa21.05■□□□□ 0.96
UFD1-209ENST00000489406 ST20-MTHFSA0A0A6YYL1 179 aa21.04■□□□□ 0.96
UFD1-209ENST00000489406 TRAF5O00463 557 aa21.04■□□□□ 0.96
UFD1-209ENST00000489406 MTHFSP49914 203 aa21.04■□□□□ 0.96
UFD1-209ENST00000489406 NEUROD1Q13562 356 aa21.04■□□□□ 0.96
UFD1-209ENST00000489406 ZNF530Q6P9A1 599 aaPredicted RBP21.04■□□□□ 0.96
UFD1-209ENST00000489406 CYP19A1P11511 503 aaPredicted RBP21.03■□□□□ 0.96
UFD1-209ENST00000489406 BRPF1P55201 1214 aaPredicted RBP21.03■□□□□ 0.96
UFD1-209ENST00000489406 PRR5LQ6MZQ0 368 aa21.03■□□□□ 0.96
UFD1-209ENST00000489406 ZNF277Q9NRM2 450 aaPredicted RBP21.03■□□□□ 0.96
UFD1-209ENST00000489406 ZBTB1Q9Y2K1 713 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms