RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 HEG1Q9ULI3 1381 aa18.66■□□□□ 0.58
VTI1A-206ENST00000489142 USPL1Q5W0Q7 1092 aa18.65■□□□□ 0.58
VTI1A-206ENST00000489142 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
VTI1A-206ENST00000489142 C10orf71Q711Q0 1435 aa18.65■□□□□ 0.58
VTI1A-206ENST00000489142 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
VTI1A-206ENST00000489142 DDR1Q08345 913 aa18.64■□□□□ 0.57
VTI1A-206ENST00000489142 ZPR1O75312 459 aa18.63■□□□□ 0.57
VTI1A-206ENST00000489142 RALBP1Q15311 655 aa18.63■□□□□ 0.57
VTI1A-206ENST00000489142 ZNF784Q8NCA9 323 aaPredicted RBP18.63■□□□□ 0.57
VTI1A-206ENST00000489142 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
VTI1A-206ENST00000489142 ZNF330Q9Y3S2 320 aaPredicted RBP18.63■□□□□ 0.57
VTI1A-206ENST00000489142 AFDNP55196 1824 aaKnown RBP18.63■□□□□ 0.57
VTI1A-206ENST00000489142 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
VTI1A-206ENST00000489142 STARD3NLO95772 234 aa18.62■□□□□ 0.57
VTI1A-206ENST00000489142 PLEKHF1Q96S99 279 aa18.62■□□□□ 0.57
VTI1A-206ENST00000489142 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
VTI1A-206ENST00000489142 GRIN3BO60391 1043 aa18.61■□□□□ 0.57
VTI1A-206ENST00000489142 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
VTI1A-206ENST00000489142 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
VTI1A-206ENST00000489142 SCN7AQ01118 1682 aa18.6■□□□□ 0.57
VTI1A-206ENST00000489142 A1BGP04217 495 aa18.6■□□□□ 0.57
VTI1A-206ENST00000489142 NEFMP07197 916 aa18.6■□□□□ 0.57
VTI1A-206ENST00000489142 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
VTI1A-206ENST00000489142 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
VTI1A-206ENST00000489142 NARFQ9UHQ1 456 aa18.6■□□□□ 0.57
VTI1A-206ENST00000489142 MYBBP1AQ9BQG0 1328 aaKnown RBP18.59■□□□□ 0.57
VTI1A-206ENST00000489142 MAPK8IP3Q9UPT6 1336 aa18.59■□□□□ 0.57
VTI1A-206ENST00000489142 POLRMTO00411 1230 aaKnown RBP18.59■□□□□ 0.57
VTI1A-206ENST00000489142 DPEP1P16444 411 aa18.59■□□□□ 0.57
VTI1A-206ENST00000489142 BCL2L12Q9HB09 334 aa18.59■□□□□ 0.57
VTI1A-206ENST00000489142 KDM3BQ7LBC6 1761 aa18.59■□□□□ 0.57
VTI1A-206ENST00000489142 HTATSF1O43719 755 aaKnown RBP18.58■□□□□ 0.56
VTI1A-206ENST00000489142 TM4SF1P30408 202 aa18.58■□□□□ 0.56
VTI1A-206ENST00000489142 EIF5P55010 431 aaKnown RBP18.58■□□□□ 0.56
VTI1A-206ENST00000489142 NFE2L2Q16236 605 aa18.58■□□□□ 0.56
VTI1A-206ENST00000489142 USP16Q9Y5T5 823 aa18.58■□□□□ 0.56
VTI1A-206ENST00000489142 NFIXQ14938 502 aa18.57■□□□□ 0.56
VTI1A-206ENST00000489142 BICDL1Q6ZP65 573 aa18.57■□□□□ 0.56
VTI1A-206ENST00000489142 TEX13AQ9BXU3 409 aaPredicted RBP18.57■□□□□ 0.56
VTI1A-206ENST00000489142 TBC1D2BQ9UPU7 963 aa18.57■□□□□ 0.56
VTI1A-206ENST00000489142 LAMB4A4D0S4 1761 aa18.56■□□□□ 0.56
VTI1A-206ENST00000489142 BCORQ6W2J9 1755 aa18.56■□□□□ 0.56
VTI1A-206ENST00000489142 TGFB2P61812 414 aa18.56■□□□□ 0.56
VTI1A-206ENST00000489142 BCS1LQ9Y276 419 aa18.56■□□□□ 0.56
VTI1A-206ENST00000489142 NRXN2Q9P2S2 1712 aa18.56■□□□□ 0.56
VTI1A-206ENST00000489142 TAF7Q15545 349 aaPredicted RBP18.55■□□□□ 0.56
VTI1A-206ENST00000489142 CCDC146Q8IYE0 955 aa18.55■□□□□ 0.56
VTI1A-206ENST00000489142 CHRNA5P30532 468 aa18.54■□□□□ 0.56
VTI1A-206ENST00000489142 A0A087WZG4 1122 aa18.53■□□□□ 0.56
VTI1A-206ENST00000489142 SNRPA1P09661 255 aaKnown RBP18.53■□□□□ 0.56
VTI1A-206ENST00000489142 KCNA3P22001 575 aa18.53■□□□□ 0.56
VTI1A-206ENST00000489142 IL6STP40189 918 aaPredicted RBP18.53■□□□□ 0.56
VTI1A-206ENST00000489142 TBC1D9BQ66K14 1250 aa18.53■□□□□ 0.56
VTI1A-206ENST00000489142 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
VTI1A-206ENST00000489142 ARFGEF1Q9Y6D6 1849 aa18.52■□□□□ 0.56
VTI1A-206ENST00000489142 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.56
VTI1A-206ENST00000489142 CARMIL3Q8ND23 1372 aa18.52■□□□□ 0.55
VTI1A-206ENST00000489142 SERPINB2P05120 415 aa18.51■□□□□ 0.55
VTI1A-206ENST00000489142 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
VTI1A-206ENST00000489142 ANKRD31Q8N7Z5 1873 aa18.51■□□□□ 0.55
VTI1A-206ENST00000489142 ATP10DQ9P241 1426 aa18.5■□□□□ 0.55
VTI1A-206ENST00000489142 NBPF26B4DH59 902 aa18.5■□□□□ 0.55
VTI1A-206ENST00000489142 RIPK4P57078 832 aa18.5■□□□□ 0.55
VTI1A-206ENST00000489142 NEUROD2Q15784 382 aa18.5■□□□□ 0.55
VTI1A-206ENST00000489142 NBPF10Q6P3W6 841 aaKnown RBP18.5■□□□□ 0.55
VTI1A-206ENST00000489142 NPM2Q86SE8 214 aaKnown RBP18.5■□□□□ 0.55
VTI1A-206ENST00000489142 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
VTI1A-206ENST00000489142 CCDC24Q8N4L8 307 aa18.5■□□□□ 0.55
VTI1A-206ENST00000489142 NBPF15Q8N660 670 aa18.5■□□□□ 0.55
VTI1A-206ENST00000489142 DLEC1Q9Y238 1755 aa18.5■□□□□ 0.55
VTI1A-206ENST00000489142 CAMTA2O94983 1202 aa18.49■□□□□ 0.55
VTI1A-206ENST00000489142 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
VTI1A-206ENST00000489142 TMPOP42166 694 aaKnown RBP18.48■□□□□ 0.55
VTI1A-206ENST00000489142 ARHGAP27Q6ZUM4 889 aa18.48■□□□□ 0.55
VTI1A-206ENST00000489142 ZNF526Q8TF50 670 aaPredicted RBP18.48■□□□□ 0.55
VTI1A-206ENST00000489142 PIM2Q9P1W9 311 aa18.48■□□□□ 0.55
VTI1A-206ENST00000489142 COL11A2P13942 1736 aaPredicted RBP18.48■□□□□ 0.55
VTI1A-206ENST00000489142 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
VTI1A-206ENST00000489142 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
VTI1A-206ENST00000489142 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
VTI1A-206ENST00000489142 ADAMTS8Q9UP79 889 aa18.47■□□□□ 0.55
VTI1A-206ENST00000489142 ADCY9O60503 1353 aa18.46■□□□□ 0.55
VTI1A-206ENST00000489142 DALRD3Q5D0E6 543 aaKnown RBP18.46■□□□□ 0.55
VTI1A-206ENST00000489142 TSPYL4Q9UJ04 414 aa18.46■□□□□ 0.55
VTI1A-206ENST00000489142 CACNA1SQ13698 1873 aa18.46■□□□□ 0.54
VTI1A-206ENST00000489142 GIGYF1O75420 1035 aaPredicted RBP18.45■□□□□ 0.54
VTI1A-206ENST00000489142 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
VTI1A-206ENST00000489142 PRR5LQ6MZQ0 368 aa18.44■□□□□ 0.54
VTI1A-206ENST00000489142 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
VTI1A-206ENST00000489142 RUNDC1Q96C34 613 aa18.44■□□□□ 0.54
VTI1A-206ENST00000489142 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
VTI1A-206ENST00000489142 NUP98P52948 1817 aa18.42■□□□□ 0.54
VTI1A-206ENST00000489142 NPHP1O15259 732 aa18.42■□□□□ 0.54
VTI1A-206ENST00000489142 MYL6BP14649 208 aa18.42■□□□□ 0.54
VTI1A-206ENST00000489142 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
VTI1A-206ENST00000489142 CNBD1Q8NA66 436 aa18.41■□□□□ 0.54
VTI1A-206ENST00000489142 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
VTI1A-206ENST00000489142 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
VTI1A-206ENST00000489142 SBF1O95248 1867 aa18.41■□□□□ 0.54
VTI1A-206ENST00000489142 FAM177BA6PVY3 158 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms