RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
ERGIC3-218ENST00000489071 CCDC184Q52MB2 194 aa11.35□□□□□ -0.59
ERGIC3-218ENST00000489071 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
ERGIC3-218ENST00000489071 PARP3Q9Y6F1 533 aa11.35□□□□□ -0.59
ERGIC3-218ENST00000489071 N4BP2Q86UW6 1770 aaPredicted RBP11.34□□□□□ -0.59
ERGIC3-218ENST00000489071 GYS1P13807 737 aa11.34□□□□□ -0.59
ERGIC3-218ENST00000489071 CRKLP46109 303 aaKnown RBP11.34□□□□□ -0.59
ERGIC3-218ENST00000489071 CNGB1Q14028 1251 aaPredicted RBP11.34□□□□□ -0.59
ERGIC3-218ENST00000489071 NGEFQ8N5V2 710 aa11.34□□□□□ -0.59
ERGIC3-218ENST00000489071 WWC3Q9ULE0 1092 aa11.34□□□□□ -0.59
ERGIC3-218ENST00000489071 CICQ96RK0 1608 aaPredicted RBP11.34□□□□□ -0.59
ERGIC3-218ENST00000489071 ADCY9O60503 1353 aa11.33□□□□□ -0.6
ERGIC3-218ENST00000489071 C4AP0C0L4 1744 aa11.33□□□□□ -0.6
ERGIC3-218ENST00000489071 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
ERGIC3-218ENST00000489071 SLC52A2Q9HAB3 445 aa11.33□□□□□ -0.6
ERGIC3-218ENST00000489071 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
ERGIC3-218ENST00000489071 DIAPH1O60610 1272 aaKnown RBP11.32□□□□□ -0.6
ERGIC3-218ENST00000489071 FAM9BQ8IZU0 186 aa11.32□□□□□ -0.6
ERGIC3-218ENST00000489071 NUDCQ9Y266 331 aa11.32□□□□□ -0.6
ERGIC3-218ENST00000489071 C10orf71Q711Q0 1435 aa11.32□□□□□ -0.6
ERGIC3-218ENST00000489071 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 HMOX1P09601 288 aa11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 PNNQ9H307 717 aaKnown RBP11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 BCS1LQ9Y276 419 aa11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 TJP1Q07157 1748 aa11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 KIAA1551Q9HCM1 1747 aa11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 BRCA1P38398 1863 aaKnown RBP11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
ERGIC3-218ENST00000489071 ZPR1O75312 459 aa11.3□□□□□ -0.6
ERGIC3-218ENST00000489071 DPEP1P16444 411 aa11.3□□□□□ -0.6
ERGIC3-218ENST00000489071 INTS5Q6P9B9 1019 aaKnown RBP11.3□□□□□ -0.6
ERGIC3-218ENST00000489071 ZNF526Q8TF50 670 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-218ENST00000489071 COL3A1P02461 1466 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-218ENST00000489071 ARFGEF1Q9Y6D6 1849 aa11.3□□□□□ -0.6
ERGIC3-218ENST00000489071 FCHSD2O94868 740 aa11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 MTHFSDQ2M296 383 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 DNAJC10Q8IXB1 793 aa11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 SPOCK2Q92563 424 aa11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 SRP68Q9UHB9 627 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 MRC1P22897 1456 aa11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
ERGIC3-218ENST00000489071 CYP19A1P11511 503 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-218ENST00000489071 HNRNPUQ00839 825 aaKnown RBP eCLIP11.28□□□□□ -0.6
ERGIC3-218ENST00000489071 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
ERGIC3-218ENST00000489071 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
ERGIC3-218ENST00000489071 YTHDC1Q96MU7 727 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-218ENST00000489071 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.6
ERGIC3-218ENST00000489071 TM4SF1P30408 202 aa11.27□□□□□ -0.61
ERGIC3-218ENST00000489071 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.61
ERGIC3-218ENST00000489071 ADAMTS8Q9UP79 889 aa11.27□□□□□ -0.61
ERGIC3-218ENST00000489071 SOS1Q07889 1333 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-218ENST00000489071 GOLGB1Q14789 3259 aaKnown RBP11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 POLRMTO00411 1230 aaKnown RBP11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 U2SURPO15042 1029 aaKnown RBP11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 HSPA6P17066 643 aa11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 KCNA3P22001 575 aa11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 DDR1Q08345 913 aa11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 USPL1Q5W0Q7 1092 aa11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 TTC5Q8N0Z6 440 aa11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 NARFQ9UHQ1 456 aa11.26□□□□□ -0.61
ERGIC3-218ENST00000489071 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 KCPQ6ZWJ8 1503 aa11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 KIF3CO14782 793 aa11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 STARD3NLO95772 234 aa11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 TEFQ10587 303 aa11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 TEX13AQ9BXU3 409 aaPredicted RBP11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 ZBTB1Q9Y2K1 713 aa11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 UBR2Q8IWV8 1755 aa11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 COL15A1P39059 1388 aa11.25□□□□□ -0.61
ERGIC3-218ENST00000489071 SBF1O95248 1867 aa11.24□□□□□ -0.61
ERGIC3-218ENST00000489071 A0A087WZG4 1122 aa11.24□□□□□ -0.61
ERGIC3-218ENST00000489071 CANXP27824 592 aaKnown RBP11.23□□□□□ -0.61
ERGIC3-218ENST00000489071 NFIXQ14938 502 aa11.23□□□□□ -0.61
ERGIC3-218ENST00000489071 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
ERGIC3-218ENST00000489071 IL17REQ8NFR9 667 aa11.23□□□□□ -0.61
ERGIC3-218ENST00000489071 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
ERGIC3-218ENST00000489071 SIPA1L3O60292 1781 aaPredicted RBP11.22□□□□□ -0.61
ERGIC3-218ENST00000489071 TOMM70O94826 608 aa11.22□□□□□ -0.61
ERGIC3-218ENST00000489071 SERPINB2P05120 415 aa11.22□□□□□ -0.61
ERGIC3-218ENST00000489071 U2AF1L5P0DN76 240 aaPredicted RBP11.22□□□□□ -0.61
ERGIC3-218ENST00000489071 CHRNA5P30532 468 aa11.22□□□□□ -0.61
ERGIC3-218ENST00000489071 U2AF1Q01081 240 aaKnown RBP eCLIP11.22□□□□□ -0.61
ERGIC3-218ENST00000489071 ZNF790Q6PG37 636 aa11.22□□□□□ -0.61
ERGIC3-218ENST00000489071 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-218ENST00000489071 NRXN2Q9P2S2 1712 aa11.21□□□□□ -0.61
ERGIC3-218ENST00000489071 HEG1Q9ULI3 1381 aa11.21□□□□□ -0.61
ERGIC3-218ENST00000489071 NEFMP07197 916 aa11.21□□□□□ -0.61
ERGIC3-218ENST00000489071 EIF5P55010 431 aaKnown RBP11.21□□□□□ -0.61
ERGIC3-218ENST00000489071 CCDC27Q2M243 656 aa11.21□□□□□ -0.61
ERGIC3-218ENST00000489071 ZNF496Q96IT1 587 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-218ENST00000489071 FMNL2Q96PY5 1086 aa11.21□□□□□ -0.61
ERGIC3-218ENST00000489071 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
ERGIC3-218ENST00000489071 KDM2BQ8NHM5 1336 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms