RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 NUP155O75694 1391 aa7.64□□□□□ -1.19
SF3A3-207ENST00000488934 NR5A1Q13285 461 aa7.64□□□□□ -1.19
SF3A3-207ENST00000488934 SH3RF1Q7Z6J0 888 aa7.64□□□□□ -1.19
SF3A3-207ENST00000488934 ANKLE2Q86XL3 938 aa7.64□□□□□ -1.19
SF3A3-207ENST00000488934 TRMT44Q8IYL2 757 aaKnown RBP7.64□□□□□ -1.19
SF3A3-207ENST00000488934 C1QTNF2Q9BXJ5 285 aa7.64□□□□□ -1.19
SF3A3-207ENST00000488934 SLC52A1Q9NWF4 448 aa7.64□□□□□ -1.19
SF3A3-207ENST00000488934 MAP4K5Q9Y4K4 846 aa7.64□□□□□ -1.19
SF3A3-207ENST00000488934 SPHKAPQ2M3C7 1700 aa7.64□□□□□ -1.19
SF3A3-207ENST00000488934 SYNMO15061 1565 aa7.63□□□□□ -1.19
SF3A3-207ENST00000488934 ADGRB3O60242 1522 aa7.63□□□□□ -1.19
SF3A3-207ENST00000488934 SLIT1O75093 1534 aa7.63□□□□□ -1.19
SF3A3-207ENST00000488934 NNTQ13423 1086 aa7.63□□□□□ -1.19
SF3A3-207ENST00000488934 VASH1Q7L8A9 365 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-207ENST00000488934 SLC10A4Q96EP9 437 aa7.63□□□□□ -1.19
SF3A3-207ENST00000488934 SENP2Q9HC62 589 aa7.63□□□□□ -1.19
SF3A3-207ENST00000488934 NEURL4Q96JN8 1562 aa7.63□□□□□ -1.19
SF3A3-207ENST00000488934 MED14O60244 1454 aa7.62□□□□□ -1.19
SF3A3-207ENST00000488934 IQSEC2Q5JU85 1478 aa7.62□□□□□ -1.19
SF3A3-207ENST00000488934 SOCS7O14512 581 aa7.62□□□□□ -1.19
SF3A3-207ENST00000488934 CAPN5O15484 640 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-207ENST00000488934 EID1Q9Y6B2 187 aa7.62□□□□□ -1.19
SF3A3-207ENST00000488934 SCAF11Q99590 1463 aaKnown RBP7.62□□□□□ -1.19
SF3A3-207ENST00000488934 ARHGAP23Q9P227 1491 aa7.62□□□□□ -1.19
SF3A3-207ENST00000488934 C4orf48Q5BLP8 95 aa7.61□□□□□ -1.19
SF3A3-207ENST00000488934 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
SF3A3-207ENST00000488934 TRIM52Q96A61 297 aa7.61□□□□□ -1.19
SF3A3-207ENST00000488934 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
SF3A3-207ENST00000488934 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
SF3A3-207ENST00000488934 HMX1Q9NP08 348 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-207ENST00000488934 NPHP4O75161 1426 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-207ENST00000488934 MYO5BQ9ULV0 1848 aa7.6□□□□□ -1.19
SF3A3-207ENST00000488934 ERFEQ4G0M1 354 aa7.6□□□□□ -1.19
SF3A3-207ENST00000488934 ATP13A2Q9NQ11 1180 aa7.6□□□□□ -1.19
SF3A3-207ENST00000488934 CPS1P31327 1500 aa7.6□□□□□ -1.19
SF3A3-207ENST00000488934 TMEM131LA2VDJ0 1609 aa7.6□□□□□ -1.19
SF3A3-207ENST00000488934 TMEM2Q9UHN6 1383 aa7.59□□□□□ -1.19
SF3A3-207ENST00000488934 KIF1BO60333 1816 aa7.59□□□□□ -1.19
SF3A3-207ENST00000488934 FSHRP23945 695 aa7.59□□□□□ -1.19
SF3A3-207ENST00000488934 WDR4P57081 412 aaKnown RBP7.59□□□□□ -1.19
SF3A3-207ENST00000488934 IDI1Q13907 227 aa7.59□□□□□ -1.19
SF3A3-207ENST00000488934 NBPF20Q3BBV1 942 aa7.59□□□□□ -1.19
SF3A3-207ENST00000488934 LTBP4Q8N2S1 1624 aa7.59□□□□□ -1.19
SF3A3-207ENST00000488934 TRPM2O94759 1503 aa7.58□□□□□ -1.2
SF3A3-207ENST00000488934 C11orf95C9JLR9 678 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-207ENST00000488934 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
SF3A3-207ENST00000488934 FBXO41Q8TF61 875 aa7.58□□□□□ -1.2
SF3A3-207ENST00000488934 ZNF330Q9Y3S2 320 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-207ENST00000488934 DHX9Q08211 1270 aaKnown RBP7.57□□□□□ -1.2
SF3A3-207ENST00000488934 SCARF1Q14162 830 aa7.57□□□□□ -1.2
SF3A3-207ENST00000488934 TXNDC2Q86VQ3 553 aa7.57□□□□□ -1.2
SF3A3-207ENST00000488934 DZIP3Q86Y13 1208 aaKnown RBP7.57□□□□□ -1.2
SF3A3-207ENST00000488934 CCDC116Q8IYX3 515 aa7.57□□□□□ -1.2
SF3A3-207ENST00000488934 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.57□□□□□ -1.2
SF3A3-207ENST00000488934 ADAM32Q8TC27 787 aa7.57□□□□□ -1.2
SF3A3-207ENST00000488934 TRIM34Q9BYJ4 488 aa7.57□□□□□ -1.2
SF3A3-207ENST00000488934 GMPR2Q9P2T1 348 aaKnown RBP7.57□□□□□ -1.2
SF3A3-207ENST00000488934 EMILIN1Q9Y6C2 1016 aa7.57□□□□□ -1.2
SF3A3-207ENST00000488934 NDUFB9Q9Y6M9 179 aa7.57□□□□□ -1.2
SF3A3-207ENST00000488934 DIP2AQ14689 1571 aa7.56□□□□□ -1.2
SF3A3-207ENST00000488934 SETD5Q9C0A6 1442 aa7.56□□□□□ -1.2
SF3A3-207ENST00000488934 PPP1R15AO75807 674 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-207ENST00000488934 UPP2O95045 317 aa7.56□□□□□ -1.2
SF3A3-207ENST00000488934 ZIC2O95409 532 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-207ENST00000488934 TIMP2P16035 220 aa7.56□□□□□ -1.2
SF3A3-207ENST00000488934 GRM5P41594 1212 aa7.56□□□□□ -1.2
SF3A3-207ENST00000488934 PGPEP1Q9NXJ5 209 aa7.56□□□□□ -1.2
SF3A3-207ENST00000488934 DACH1Q9UI36 760 aa7.56□□□□□ -1.2
SF3A3-207ENST00000488934 ZNF335Q9H4Z2 1342 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-207ENST00000488934 ZFYVE9O95405 1425 aa7.55□□□□□ -1.2
SF3A3-207ENST00000488934 ZBBXA8MT70 800 aa7.55□□□□□ -1.2
SF3A3-207ENST00000488934 GJD4Q96KN9 370 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-207ENST00000488934 TRIM47Q96LD4 638 aa7.55□□□□□ -1.2
SF3A3-207ENST00000488934 KCTD15Q96SI1 283 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-207ENST00000488934 CLTCL1P53675 1640 aa7.55□□□□□ -1.2
SF3A3-207ENST00000488934 RIMS2Q9UQ26 1411 aa7.54□□□□□ -1.2
SF3A3-207ENST00000488934 NR3C2P08235 984 aa7.54□□□□□ -1.2
SF3A3-207ENST00000488934 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-207ENST00000488934 PLEKHG1Q9ULL1 1385 aa7.54□□□□□ -1.2
SF3A3-207ENST00000488934 LTKP29376 864 aa7.53□□□□□ -1.2
SF3A3-207ENST00000488934 MRPL14Q6P1L8 145 aaKnown RBP7.53□□□□□ -1.2
SF3A3-207ENST00000488934 MTMR14Q8NCE2 650 aa7.53□□□□□ -1.2
SF3A3-207ENST00000488934 NKTRP30414 1462 aaKnown RBP7.53□□□□□ -1.2
SF3A3-207ENST00000488934 NWD1Q149M9 1564 aa7.53□□□□□ -1.2
SF3A3-207ENST00000488934 CCDC144AA2RUR9 1427 aa7.52□□□□□ -1.2
SF3A3-207ENST00000488934 RAB3GAP2Q9H2M9 1393 aa7.52□□□□□ -1.21
SF3A3-207ENST00000488934 POTECB2RU33 542 aa7.52□□□□□ -1.21
SF3A3-207ENST00000488934 BMP1P13497 986 aa7.52□□□□□ -1.21
SF3A3-207ENST00000488934 CCDC125Q86Z20 511 aa7.52□□□□□ -1.21
SF3A3-207ENST00000488934 ITPKCQ96DU7 683 aa7.52□□□□□ -1.21
SF3A3-207ENST00000488934 KLF16Q9BXK1 252 aaPredicted RBP7.52□□□□□ -1.21
SF3A3-207ENST00000488934 CHD2O14647 1828 aaKnown RBP7.52□□□□□ -1.21
SF3A3-207ENST00000488934 STRCP1A6NGW2 1772 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 SETBP1Q9Y6X0 1596 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 PIK3R4Q99570 1358 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 NR1H3Q13133 447 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 ZNF326Q5BKZ1 582 aaKnown RBP7.51□□□□□ -1.21
SF3A3-207ENST00000488934 SEPT12Q8IYM1 358 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 MPHOSPH9Q99550 1183 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 OCSTAMPQ9BR26 566 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms