RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ZNF295-AS1Q8N0V1 137 aa9.94□□□□□ -0.82
PTPN4-212ENST00000488896 TSPAN10Q9H1Z9 355 aaPredicted RBP9.94□□□□□ -0.82
PTPN4-212ENST00000488896 STK17AQ9UEE5 414 aa9.94□□□□□ -0.82
PTPN4-212ENST00000488896 FOXK2Q01167 660 aa9.93□□□□□ -0.82
PTPN4-212ENST00000488896 DPYDQ12882 1025 aa9.93□□□□□ -0.82
PTPN4-212ENST00000488896 EFHC2Q5JST6 749 aa9.93□□□□□ -0.82
PTPN4-212ENST00000488896 C14orf37Q86TY3 774 aa9.93□□□□□ -0.82
PTPN4-212ENST00000488896 ZDHHC1Q8WTX9 485 aa9.93□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L15C9J2P7 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L10C9JJH3 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L13C9JLJ4 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L12C9JPN9 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L11C9JVI0 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L21D6R901 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L18D6R9N7 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L22D6RA61 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L17D6RBQ6 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L19D6RCP7 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L20D6RJB6 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 DKK1O94907 266 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 TATP17735 454 aaPredicted RBP9.92□□□□□ -0.82
PTPN4-212ENST00000488896 ATP4AP20648 1035 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 TXLNAP40222 546 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 SEC13P55735 322 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 USP17L24Q0WX57 530 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 PTK7Q13308 1070 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 L3MBTL2Q969R5 705 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 HINFPQ9BQA5 517 aa9.92□□□□□ -0.82
PTPN4-212ENST00000488896 ADAMTS2O95450 1211 aa9.91□□□□□ -0.82
PTPN4-212ENST00000488896 NOS2P35228 1153 aa9.91□□□□□ -0.82
PTPN4-212ENST00000488896 SH3PXD2AQ5TCZ1 1133 aa9.91□□□□□ -0.82
PTPN4-212ENST00000488896 BICDL1Q6ZP65 573 aa9.91□□□□□ -0.82
PTPN4-212ENST00000488896 TEAD4Q15561 434 aa9.9□□□□□ -0.82
PTPN4-212ENST00000488896 WHAMMQ8TF30 809 aa9.9□□□□□ -0.82
PTPN4-212ENST00000488896 A0A1W2PNR3 127 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 SERTM1A2A2V5 107 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 FAM181BA6NEQ2 426 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 M0R2N6 131 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 MX2P20592 715 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 ANKMY2Q8IV38 441 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 GAS2L2Q8NHY3 880 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 C1orf216Q8TAB5 229 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
PTPN4-212ENST00000488896 ABHD17AQ96GS6 310 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 CRISPLD1Q9H336 500 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
PTPN4-212ENST00000488896 FAM196BA6NMK8 535 aa9.88□□□□□ -0.83
PTPN4-212ENST00000488896 PPP1R12BO60237 982 aaPredicted RBP9.88□□□□□ -0.83
PTPN4-212ENST00000488896 LBRQ14739 615 aaKnown RBP9.88□□□□□ -0.83
PTPN4-212ENST00000488896 SVOPQ8N4V2 548 aa9.88□□□□□ -0.83
PTPN4-212ENST00000488896 SCG3Q8WXD2 468 aaKnown RBP9.88□□□□□ -0.83
PTPN4-212ENST00000488896 CHMP3Q9Y3E7 222 aa9.88□□□□□ -0.83
PTPN4-212ENST00000488896 HCN4Q9Y3Q4 1203 aa9.88□□□□□ -0.83
PTPN4-212ENST00000488896 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
PTPN4-212ENST00000488896 IGF1RP08069 1367 aa9.88□□□□□ -0.83
PTPN4-212ENST00000488896 PSMA6P60900 246 aaKnown RBP9.87□□□□□ -0.83
PTPN4-212ENST00000488896 SRSF11Q05519 484 aaKnown RBP9.87□□□□□ -0.83
PTPN4-212ENST00000488896 UBAP2LQ14157 1087 aaKnown RBP9.87□□□□□ -0.83
PTPN4-212ENST00000488896 CCDC97Q96F63 343 aaPredicted RBP9.87□□□□□ -0.83
PTPN4-212ENST00000488896 ZIC5Q96T25 663 aa9.87□□□□□ -0.83
PTPN4-212ENST00000488896 ZCCHC2Q9C0B9 1178 aaKnown RBP9.87□□□□□ -0.83
PTPN4-212ENST00000488896 ZDHHC3Q9NYG2 299 aa9.87□□□□□ -0.83
PTPN4-212ENST00000488896 PHF24Q9UPV7 400 aa9.87□□□□□ -0.83
PTPN4-212ENST00000488896 BNIP3LO60238 219 aa9.86□□□□□ -0.83
PTPN4-212ENST00000488896 SLURP2P0DP57 97 aa9.86□□□□□ -0.83
PTPN4-212ENST00000488896 ZNF385CQ66K41 422 aaPredicted RBP9.86□□□□□ -0.83
PTPN4-212ENST00000488896 CFHR5Q9BXR6 569 aa9.86□□□□□ -0.83
PTPN4-212ENST00000488896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.85□□□□□ -0.83
PTPN4-212ENST00000488896 DCDC2BA2VCK2 349 aa9.85□□□□□ -0.83
PTPN4-212ENST00000488896 EML1O00423 815 aa9.85□□□□□ -0.83
PTPN4-212ENST00000488896 ATAD2Q6PL18 1390 aa9.85□□□□□ -0.83
PTPN4-212ENST00000488896 ATXN7O15265 892 aaPredicted RBP9.84□□□□□ -0.83
PTPN4-212ENST00000488896 C21orf2O43822 256 aa9.84□□□□□ -0.83
PTPN4-212ENST00000488896 FIGNL1Q6PIW4 674 aa9.84□□□□□ -0.83
PTPN4-212ENST00000488896 LYPD4Q6UWN0 246 aa9.84□□□□□ -0.83
PTPN4-212ENST00000488896 NLRP8Q86W28 1048 aa9.84□□□□□ -0.83
PTPN4-212ENST00000488896 FAM200AQ8TCP9 573 aa9.84□□□□□ -0.83
PTPN4-212ENST00000488896 NGLY1Q96IV0 654 aa9.84□□□□□ -0.83
PTPN4-212ENST00000488896 NEUROD4Q9HD90 331 aa9.84□□□□□ -0.83
PTPN4-212ENST00000488896 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
PTPN4-212ENST00000488896 KHNYNO15037 678 aaKnown RBP9.83□□□□□ -0.84
PTPN4-212ENST00000488896 FGFR3P22607 806 aa9.83□□□□□ -0.84
PTPN4-212ENST00000488896 LRRC69Q6ZNQ3 347 aa9.83□□□□□ -0.84
PTPN4-212ENST00000488896 RHPN1Q8TCX5 695 aa9.83□□□□□ -0.84
PTPN4-212ENST00000488896 KLRG1Q96E93 195 aa9.83□□□□□ -0.84
PTPN4-212ENST00000488896 ARXQ96QS3 562 aa9.83□□□□□ -0.84
PTPN4-212ENST00000488896 PHACTR1Q9C0D0 580 aa9.83□□□□□ -0.84
PTPN4-212ENST00000488896 ATXN7L1Q9ULK2 861 aaPredicted RBP9.83□□□□□ -0.84
PTPN4-212ENST00000488896 NOVA2Q9UNW9 492 aaKnown RBP9.83□□□□□ -0.84
PTPN4-212ENST00000488896 PCDHGC4Q9Y5F7 938 aa9.83□□□□□ -0.84
PTPN4-212ENST00000488896 CTBSQ01459 385 aa9.82□□□□□ -0.84
PTPN4-212ENST00000488896 CELA2BP08218 269 aaPredicted RBP9.81□□□□□ -0.84
PTPN4-212ENST00000488896 BMP4P12644 408 aa9.81□□□□□ -0.84
PTPN4-212ENST00000488896 MAP3K10Q02779 954 aa9.81□□□□□ -0.84
PTPN4-212ENST00000488896 ACDQ96AP0 544 aa9.81□□□□□ -0.84
PTPN4-212ENST00000488896 NDFIP2Q9NV92 336 aa9.81□□□□□ -0.84
PTPN4-212ENST00000488896 SERPINA10Q9UK55 444 aa9.81□□□□□ -0.84
PTPN4-212ENST00000488896 MAPTP10636 758 aaKnown RBP9.8□□□□□ -0.84
PTPN4-212ENST00000488896 CD33P20138 364 aa9.8□□□□□ -0.84
PTPN4-212ENST00000488896 C2CD2LO14523 706 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms