RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 SOS1Q07889 1333 aaPredicted RBP15.85■□□□□ 0.13
TRAIP-209ENST00000488860 CENPBP07199 599 aaPredicted RBP15.84■□□□□ 0.13
TRAIP-209ENST00000488860 EZH2Q15910 746 aaKnown RBP15.84■□□□□ 0.13
TRAIP-209ENST00000488860 SLC27A3Q5K4L6 730 aa15.84■□□□□ 0.13
TRAIP-209ENST00000488860 CCDC125Q86Z20 511 aa15.84■□□□□ 0.13
TRAIP-209ENST00000488860 LINC00116Q8NCU8 138 aa15.84■□□□□ 0.13
TRAIP-209ENST00000488860 BCL2L13Q9BXK5 485 aa15.84■□□□□ 0.13
TRAIP-209ENST00000488860 TEX13AQ9BXU3 409 aaPredicted RBP15.84■□□□□ 0.13
TRAIP-209ENST00000488860 C4AP0C0L4 1744 aa15.83■□□□□ 0.13
TRAIP-209ENST00000488860 STARD3NLO95772 234 aa15.83■□□□□ 0.12
TRAIP-209ENST00000488860 CT47B1P0C2W7 299 aaPredicted RBP15.83■□□□□ 0.12
TRAIP-209ENST00000488860 PIP4K2AP48426 406 aaPredicted RBP15.83■□□□□ 0.12
TRAIP-209ENST00000488860 CCDC30Q5VVM6 783 aa15.83■□□□□ 0.12
TRAIP-209ENST00000488860 UPF1Q92900 1129 aaKnown RBP eCLIP15.83■□□□□ 0.12
TRAIP-209ENST00000488860 STK31Q9BXU1 1019 aa15.83■□□□□ 0.12
TRAIP-209ENST00000488860 LRRC4BQ9NT99 713 aa15.83■□□□□ 0.12
TRAIP-209ENST00000488860 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
TRAIP-209ENST00000488860 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
TRAIP-209ENST00000488860 CHPF2Q9P2E5 772 aa15.82■□□□□ 0.12
TRAIP-209ENST00000488860 ANXA1P04083 346 aa15.81■□□□□ 0.12
TRAIP-209ENST00000488860 A1BGP04217 495 aa15.81■□□□□ 0.12
TRAIP-209ENST00000488860 MYL6BP14649 208 aa15.81■□□□□ 0.12
TRAIP-209ENST00000488860 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
TRAIP-209ENST00000488860 CAMKK2Q96RR4 588 aa15.81■□□□□ 0.12
TRAIP-209ENST00000488860 RCAN3Q9UKA8 241 aa15.81■□□□□ 0.12
TRAIP-209ENST00000488860 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
TRAIP-209ENST00000488860 ARFGEF2Q9Y6D5 1785 aa15.81■□□□□ 0.12
TRAIP-209ENST00000488860 BCORQ6W2J9 1755 aa15.8■□□□□ 0.12
TRAIP-209ENST00000488860 QSER1Q2KHR3 1735 aa15.8■□□□□ 0.12
TRAIP-209ENST00000488860 CNTNAP4Q9C0A0 1308 aa15.8■□□□□ 0.12
TRAIP-209ENST00000488860 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
TRAIP-209ENST00000488860 PROM2Q8N271 834 aa15.8■□□□□ 0.12
TRAIP-209ENST00000488860 AK7Q96M32 723 aa15.8■□□□□ 0.12
TRAIP-209ENST00000488860 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
TRAIP-209ENST00000488860 CCDC87Q9NVE4 849 aa15.8■□□□□ 0.12
TRAIP-209ENST00000488860 ZBTB1Q9Y2K1 713 aa15.8■□□□□ 0.12
TRAIP-209ENST00000488860 ERBB4Q15303 1308 aa15.79■□□□□ 0.12
TRAIP-209ENST00000488860 RARSP54136 660 aaKnown RBP15.79■□□□□ 0.12
TRAIP-209ENST00000488860 PROSER3Q2NL68 480 aa15.79■□□□□ 0.12
TRAIP-209ENST00000488860 SSH1Q8WYL5 1049 aa15.79■□□□□ 0.12
TRAIP-209ENST00000488860 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
TRAIP-209ENST00000488860 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
TRAIP-209ENST00000488860 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
TRAIP-209ENST00000488860 AFDNP55196 1824 aaKnown RBP15.78■□□□□ 0.12
TRAIP-209ENST00000488860 GNPATO15228 680 aa15.78■□□□□ 0.12
TRAIP-209ENST00000488860 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
TRAIP-209ENST00000488860 DDX21Q9NR30 783 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRAIP-209ENST00000488860 ANKRD36CQ5JPF3 1778 aa15.77■□□□□ 0.12
TRAIP-209ENST00000488860 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
TRAIP-209ENST00000488860 BCAR3O75815 825 aa15.77■□□□□ 0.12
TRAIP-209ENST00000488860 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
TRAIP-209ENST00000488860 NBPF14Q5TI25 921 aa15.77■□□□□ 0.12
TRAIP-209ENST00000488860 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
TRAIP-209ENST00000488860 INTS5Q6P9B9 1019 aaKnown RBP15.77■□□□□ 0.12
TRAIP-209ENST00000488860 MRPL50Q8N5N7 158 aaKnown RBP15.77■□□□□ 0.12
TRAIP-209ENST00000488860 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
TRAIP-209ENST00000488860 NUP98P52948 1817 aa15.77■□□□□ 0.11
TRAIP-209ENST00000488860 N4BP2Q86UW6 1770 aaPredicted RBP15.77■□□□□ 0.11
TRAIP-209ENST00000488860 COL15A1P39059 1388 aa15.76■□□□□ 0.11
TRAIP-209ENST00000488860 PHF14O94880 888 aa15.76■□□□□ 0.11
TRAIP-209ENST00000488860 PDIA6Q15084 440 aa15.76■□□□□ 0.11
TRAIP-209ENST00000488860 NPM2Q86SE8 214 aaKnown RBP15.76■□□□□ 0.11
TRAIP-209ENST00000488860 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
TRAIP-209ENST00000488860 ZNF827Q17R98 1081 aa15.75■□□□□ 0.11
TRAIP-209ENST00000488860 FRAT1Q92837 279 aaPredicted RBP15.75■□□□□ 0.11
TRAIP-209ENST00000488860 ARXQ96QS3 562 aa15.75■□□□□ 0.11
TRAIP-209ENST00000488860 PHAXQ9H814 394 aaKnown RBP15.75■□□□□ 0.11
TRAIP-209ENST00000488860 HYPKQ9NX55 129 aa15.75■□□□□ 0.11
TRAIP-209ENST00000488860 KIF16BQ96L93 1317 aa15.74■□□□□ 0.11
TRAIP-209ENST00000488860 HMGB2P26583 209 aaKnown RBP15.74■□□□□ 0.11
TRAIP-209ENST00000488860 IL6STP40189 918 aaPredicted RBP15.74■□□□□ 0.11
TRAIP-209ENST00000488860 RC3H1Q5TC82 1133 aaKnown RBP15.74■□□□□ 0.11
TRAIP-209ENST00000488860 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
TRAIP-209ENST00000488860 G2E3Q7L622 706 aa15.74■□□□□ 0.11
TRAIP-209ENST00000488860 XAGE3Q8WTP9 111 aa15.74■□□□□ 0.11
TRAIP-209ENST00000488860 STK32BQ9NY57 414 aa15.74■□□□□ 0.11
TRAIP-209ENST00000488860 RTCBQ9Y3I0 505 aaKnown RBP15.74■□□□□ 0.11
TRAIP-209ENST00000488860 FLIIQ13045 1269 aa15.73■□□□□ 0.11
TRAIP-209ENST00000488860 ANO8Q9HCE9 1232 aaPredicted RBP15.73■□□□□ 0.11
TRAIP-209ENST00000488860 TFCP2L1Q9NZI6 479 aa15.73■□□□□ 0.11
TRAIP-209ENST00000488860 RPS6KA4O75676 772 aa15.72■□□□□ 0.11
TRAIP-209ENST00000488860 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
TRAIP-209ENST00000488860 KIF6Q6ZMV9 814 aa15.72■□□□□ 0.11
TRAIP-209ENST00000488860 COPS6Q7L5N1 327 aa15.72■□□□□ 0.11
TRAIP-209ENST00000488860 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
TRAIP-209ENST00000488860 NOB1Q9ULX3 412 aaKnown RBP15.72■□□□□ 0.11
TRAIP-209ENST00000488860 EIF5P55010 431 aaKnown RBP15.71■□□□□ 0.11
TRAIP-209ENST00000488860 TTLL7Q6ZT98 887 aa15.71■□□□□ 0.11
TRAIP-209ENST00000488860 LRP10Q7Z4F1 713 aa15.71■□□□□ 0.11
TRAIP-209ENST00000488860 AMIGO3Q86WK7 504 aa15.71■□□□□ 0.11
TRAIP-209ENST00000488860 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.11
TRAIP-209ENST00000488860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.7■□□□□ 0.1
TRAIP-209ENST00000488860 MSH5O43196 834 aa15.7■□□□□ 0.1
TRAIP-209ENST00000488860 ZBTB3Q9H5J0 574 aa15.7■□□□□ 0.1
TRAIP-209ENST00000488860 TBC1D2BQ9UPU7 963 aa15.7■□□□□ 0.1
TRAIP-209ENST00000488860 PTPRCP08575 1304 aa15.69■□□□□ 0.1
TRAIP-209ENST00000488860 A0A087WZG4 1122 aa15.69■□□□□ 0.1
TRAIP-209ENST00000488860 PLIN1O60240 522 aa15.69■□□□□ 0.1
TRAIP-209ENST00000488860 DDX58O95786 925 aaKnown RBP15.69■□□□□ 0.1
TRAIP-209ENST00000488860 SSFA2P28290 1259 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms