RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 UTRNP46939 3433 aa29.56■■■□□ 2.32
VAMP2-204ENST00000488857 KLHL34Q8N239 644 aa29.56■■■□□ 2.32
VAMP2-204ENST00000488857 COL15A1P39059 1388 aa29.54■■■□□ 2.32
VAMP2-204ENST00000488857 GOLGB1Q14789 3259 aaKnown RBP29.54■■■□□ 2.32
VAMP2-204ENST00000488857 MMP10P09238 476 aa29.54■■■□□ 2.32
VAMP2-204ENST00000488857 PNISRQ8TF01 805 aaKnown RBP29.54■■■□□ 2.32
VAMP2-204ENST00000488857 ADAMTS8Q9UP79 889 aa29.54■■■□□ 2.32
VAMP2-204ENST00000488857 TMPOP42166 694 aaKnown RBP29.53■■■□□ 2.32
VAMP2-204ENST00000488857 NLGN2Q8NFZ4 835 aa29.53■■■□□ 2.32
VAMP2-204ENST00000488857 RUNDC1Q96C34 613 aa29.53■■■□□ 2.32
VAMP2-204ENST00000488857 RIPK4P57078 832 aa29.52■■■□□ 2.32
VAMP2-204ENST00000488857 SRP68Q9UHB9 627 aaKnown RBP29.52■■■□□ 2.32
VAMP2-204ENST00000488857 EIF5P55010 431 aaKnown RBP29.51■■■□□ 2.31
VAMP2-204ENST00000488857 KIF13BQ9NQT8 1826 aa29.5■■■□□ 2.31
VAMP2-204ENST00000488857 SNRPA1P09661 255 aaKnown RBP29.5■■■□□ 2.31
VAMP2-204ENST00000488857 LMOD3Q0VAK6 560 aa29.5■■■□□ 2.31
VAMP2-204ENST00000488857 CCDC146Q8IYE0 955 aa29.5■■■□□ 2.31
VAMP2-204ENST00000488857 THUMPD2Q9BTF0 503 aaKnown RBP29.5■■■□□ 2.31
VAMP2-204ENST00000488857 NARFQ9UHQ1 456 aa29.5■■■□□ 2.31
VAMP2-204ENST00000488857 ZPR1O75312 459 aa29.49■■■□□ 2.31
VAMP2-204ENST00000488857 CANXP27824 592 aaKnown RBP29.49■■■□□ 2.31
VAMP2-204ENST00000488857 FKBP8Q14318 412 aa29.48■■■□□ 2.31
VAMP2-204ENST00000488857 MIS18AQ9NYP9 233 aa29.48■■■□□ 2.31
VAMP2-204ENST00000488857 IL6STP40189 918 aaPredicted RBP29.47■■■□□ 2.31
VAMP2-204ENST00000488857 LAMB4A4D0S4 1761 aa29.47■■■□□ 2.31
VAMP2-204ENST00000488857 A0A087WZG4 1122 aa29.46■■■□□ 2.31
VAMP2-204ENST00000488857 USPL1Q5W0Q7 1092 aa29.46■■■□□ 2.31
VAMP2-204ENST00000488857 USP16Q9Y5T5 823 aa29.46■■■□□ 2.31
VAMP2-204ENST00000488857 A1BGP04217 495 aa29.45■■■□□ 2.31
VAMP2-204ENST00000488857 C10orf71Q711Q0 1435 aa29.45■■■□□ 2.3
VAMP2-204ENST00000488857 PRAMEF22A3QJZ6 481 aa29.44■■■□□ 2.3
VAMP2-204ENST00000488857 BABAM1Q9NWV8 329 aa29.44■■■□□ 2.3
VAMP2-204ENST00000488857 PARP3Q9Y6F1 533 aa29.44■■■□□ 2.3
VAMP2-204ENST00000488857 SCN7AQ01118 1682 aa29.44■■■□□ 2.3
VAMP2-204ENST00000488857 TM4SF1P30408 202 aa29.43■■■□□ 2.3
VAMP2-204ENST00000488857 RRP7AQ9Y3A4 280 aaKnown RBP29.43■■■□□ 2.3
VAMP2-204ENST00000488857 ANP32CO43423 234 aa29.42■■■□□ 2.3
VAMP2-204ENST00000488857 EIF4A1P60842 406 aaKnown RBP29.42■■■□□ 2.3
VAMP2-204ENST00000488857 BCL2L12Q9HB09 334 aa29.42■■■□□ 2.3
VAMP2-204ENST00000488857 KIAA1551Q9HCM1 1747 aa29.42■■■□□ 2.3
VAMP2-204ENST00000488857 DDR1Q08345 913 aa29.41■■■□□ 2.3
VAMP2-204ENST00000488857 TRIM35Q9UPQ4 493 aa29.41■■■□□ 2.3
VAMP2-204ENST00000488857 GIGYF1O75420 1035 aaPredicted RBP29.4■■■□□ 2.3
VAMP2-204ENST00000488857 GPR162Q16538 588 aa29.4■■■□□ 2.3
VAMP2-204ENST00000488857 CCDC184Q52MB2 194 aa29.4■■■□□ 2.3
VAMP2-204ENST00000488857 NEUROD2Q15784 382 aa29.39■■■□□ 2.3
VAMP2-204ENST00000488857 CHD4Q14839 1912 aa29.38■■■□□ 2.29
VAMP2-204ENST00000488857 POLRMTO00411 1230 aaKnown RBP29.38■■■□□ 2.29
VAMP2-204ENST00000488857 TSPYL4Q9UJ04 414 aa29.38■■■□□ 2.29
VAMP2-204ENST00000488857 NRXN2Q9P2S2 1712 aa29.37■■■□□ 2.29
VAMP2-204ENST00000488857 BCORQ6W2J9 1755 aa29.37■■■□□ 2.29
VAMP2-204ENST00000488857 PXDNLA1KZ92 1463 aa29.36■■■□□ 2.29
VAMP2-204ENST00000488857 TGFB2P61812 414 aa29.36■■■□□ 2.29
VAMP2-204ENST00000488857 NFIXQ14938 502 aa29.36■■■□□ 2.29
VAMP2-204ENST00000488857 NPM2Q86SE8 214 aaKnown RBP29.36■■■□□ 2.29
VAMP2-204ENST00000488857 AFDNP55196 1824 aaKnown RBP29.36■■■□□ 2.29
VAMP2-204ENST00000488857 NBPF26B4DH59 902 aa29.35■■■□□ 2.29
VAMP2-204ENST00000488857 YBX3P16989 372 aaKnown RBP eCLIP29.35■■■□□ 2.29
VAMP2-204ENST00000488857 NBPF10Q6P3W6 841 aaKnown RBP29.35■■■□□ 2.29
VAMP2-204ENST00000488857 NBPF15Q8N660 670 aa29.35■■■□□ 2.29
VAMP2-204ENST00000488857 TBC1D2BQ9UPU7 963 aa29.35■■■□□ 2.29
VAMP2-204ENST00000488857 ZNF330Q9Y3S2 320 aaPredicted RBP29.35■■■□□ 2.29
VAMP2-204ENST00000488857 CAMTA2O94983 1202 aa29.33■■■□□ 2.29
VAMP2-204ENST00000488857 PELP1Q8IZL8 1130 aaKnown RBP29.33■■■□□ 2.29
VAMP2-204ENST00000488857 N4BP2Q86UW6 1770 aaPredicted RBP29.33■■■□□ 2.29
VAMP2-204ENST00000488857 CHL1O00533 1208 aa29.32■■■□□ 2.28
VAMP2-204ENST00000488857 APAF1O14727 1248 aa29.32■■■□□ 2.28
VAMP2-204ENST00000488857 GRIN3BO60391 1043 aa29.32■■■□□ 2.28
VAMP2-204ENST00000488857 PIP4K2AP48426 406 aaPredicted RBP29.32■■■□□ 2.28
VAMP2-204ENST00000488857 RGL2O15211 777 aa29.31■■■□□ 2.28
VAMP2-204ENST00000488857 DZIP3Q86Y13 1208 aaKnown RBP29.31■■■□□ 2.28
VAMP2-204ENST00000488857 BRCA1P38398 1863 aaKnown RBP29.3■■■□□ 2.28
VAMP2-204ENST00000488857 YY1P25490 414 aa29.3■■■□□ 2.28
VAMP2-204ENST00000488857 MRS2Q9HD23 443 aa29.3■■■□□ 2.28
VAMP2-204ENST00000488857 ERBB4Q15303 1308 aa29.28■■■□□ 2.28
VAMP2-204ENST00000488857 TBC1D9BQ66K14 1250 aa29.28■■■□□ 2.28
VAMP2-204ENST00000488857 SERPINB2P05120 415 aa29.27■■■□□ 2.28
VAMP2-204ENST00000488857 CLEC4GQ6UXB4 293 aa29.27■■■□□ 2.28
VAMP2-204ENST00000488857 CFAP44Q96MT7 982 aa29.26■■■□□ 2.27
VAMP2-204ENST00000488857 CARMIL3Q8ND23 1372 aa29.26■■■□□ 2.27
VAMP2-204ENST00000488857 A0A0G2JLW4 131 aa29.25■■■□□ 2.27
VAMP2-204ENST00000488857 DPEP1P16444 411 aa29.25■■■□□ 2.27
VAMP2-204ENST00000488857 KCNA3P22001 575 aa29.24■■■□□ 2.27
VAMP2-204ENST00000488857 CALD1Q05682 793 aaKnown RBP29.23■■■□□ 2.27
VAMP2-204ENST00000488857 BICDL1Q6ZP65 573 aa29.23■■■□□ 2.27
VAMP2-204ENST00000488857 ZNF652Q9Y2D9 606 aa29.23■■■□□ 2.27
VAMP2-204ENST00000488857 ZNF853P0CG23 659 aa29.22■■■□□ 2.27
VAMP2-204ENST00000488857 SETDB2Q96T68 719 aa29.22■■■□□ 2.27
VAMP2-204ENST00000488857 LAS1LQ9Y4W2 734 aaKnown RBP29.21■■■□□ 2.27
VAMP2-204ENST00000488857 NCBP3Q53F19 620 aaKnown RBP29.2■■■□□ 2.26
VAMP2-204ENST00000488857 IFT57Q9NWB7 429 aa29.2■■■□□ 2.26
VAMP2-204ENST00000488857 DLEC1Q9Y238 1755 aa29.19■■■□□ 2.26
VAMP2-204ENST00000488857 ARFGEF1Q9Y6D6 1849 aa29.19■■■□□ 2.26
VAMP2-204ENST00000488857 ERVV-1B6SEH8 477 aa29.18■■■□□ 2.26
VAMP2-204ENST00000488857 HOXB7P09629 217 aa29.18■■■□□ 2.26
VAMP2-204ENST00000488857 PDIA6Q15084 440 aa29.18■■■□□ 2.26
VAMP2-204ENST00000488857 CCDC27Q2M243 656 aa29.18■■■□□ 2.26
VAMP2-204ENST00000488857 LRP10Q7Z4F1 713 aa29.18■■■□□ 2.26
VAMP2-204ENST00000488857 WWC3Q9ULE0 1092 aa29.18■■■□□ 2.26
VAMP2-204ENST00000488857 ANKRD31Q8N7Z5 1873 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms