RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 PDGFDQ9GZP0 370 aaPredicted RBP14.53□□□□□ -0.08
NUP98-212ENST00000488828 ITPK1Q13572 414 aa14.52□□□□□ -0.09
NUP98-212ENST00000488828 CCDC184Q52MB2 194 aa14.52□□□□□ -0.09
NUP98-212ENST00000488828 SPON1Q9HCB6 807 aa14.52□□□□□ -0.09
NUP98-212ENST00000488828 RRP7AQ9Y3A4 280 aaKnown RBP14.52□□□□□ -0.09
NUP98-212ENST00000488828 PHF14O94880 888 aa14.51□□□□□ -0.09
NUP98-212ENST00000488828 LINC00116Q8NCU8 138 aa14.51□□□□□ -0.09
NUP98-212ENST00000488828 PPP1R1BQ9UD71 204 aaPredicted RBP14.51□□□□□ -0.09
NUP98-212ENST00000488828 GNPATO15228 680 aa14.5□□□□□ -0.09
NUP98-212ENST00000488828 TMPOP42166 694 aaKnown RBP14.5□□□□□ -0.09
NUP98-212ENST00000488828 TAF7Q15545 349 aaPredicted RBP14.5□□□□□ -0.09
NUP98-212ENST00000488828 BBXQ8WY36 941 aaPredicted RBP14.5□□□□□ -0.09
NUP98-212ENST00000488828 SLC4A9Q96Q91 983 aa14.5□□□□□ -0.09
NUP98-212ENST00000488828 LMOD3Q0VAK6 560 aa14.49□□□□□ -0.09
NUP98-212ENST00000488828 ZNF790Q6PG37 636 aa14.49□□□□□ -0.09
NUP98-212ENST00000488828 SMIM5Q71RC9 77 aa14.49□□□□□ -0.09
NUP98-212ENST00000488828 FLAD1Q8NFF5 587 aa14.49□□□□□ -0.09
NUP98-212ENST00000488828 THUMPD2Q9BTF0 503 aaKnown RBP14.49□□□□□ -0.09
NUP98-212ENST00000488828 MIS18AQ9NYP9 233 aa14.49□□□□□ -0.09
NUP98-212ENST00000488828 SCN11AQ9UI33 1791 aa14.49□□□□□ -0.09
NUP98-212ENST00000488828 GSE1Q14687 1217 aa14.48□□□□□ -0.09
NUP98-212ENST00000488828 COL23A1Q86Y22 540 aaPredicted RBP14.48□□□□□ -0.09
NUP98-212ENST00000488828 CIZ1Q9ULV3 898 aaPredicted RBP14.48□□□□□ -0.09
NUP98-212ENST00000488828 RTCBQ9Y3I0 505 aaKnown RBP14.48□□□□□ -0.09
NUP98-212ENST00000488828 LY75O60449 1722 aa14.48□□□□□ -0.09
NUP98-212ENST00000488828 PNPLA7Q6ZV29 1317 aa14.47□□□□□ -0.09
NUP98-212ENST00000488828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.47□□□□□ -0.09
NUP98-212ENST00000488828 TRAPPC3LQ5T215 181 aa14.47□□□□□ -0.09
NUP98-212ENST00000488828 DNAJC10Q8IXB1 793 aa14.47□□□□□ -0.09
NUP98-212ENST00000488828 ZNF496Q96IT1 587 aaPredicted RBP14.47□□□□□ -0.09
NUP98-212ENST00000488828 FMNL2Q96PY5 1086 aa14.47□□□□□ -0.09
NUP98-212ENST00000488828 MTFR1LQ9H019 292 aa14.47□□□□□ -0.09
NUP98-212ENST00000488828 CEMIPQ8WUJ3 1361 aa14.47□□□□□ -0.09
NUP98-212ENST00000488828 SENP3-EIF4A1A0A087X0R7 540 aa14.46□□□□□ -0.09
NUP98-212ENST00000488828 APAF1O14727 1248 aa14.46□□□□□ -0.09
NUP98-212ENST00000488828 KCNQ3O43525 872 aa14.46□□□□□ -0.09
NUP98-212ENST00000488828 GABBR2O75899 941 aa14.46□□□□□ -0.09
NUP98-212ENST00000488828 FAM9BQ8IZU0 186 aa14.46□□□□□ -0.09
NUP98-212ENST00000488828 PNISRQ8TF01 805 aaKnown RBP14.46□□□□□ -0.09
NUP98-212ENST00000488828 SLC16A10Q8TF71 515 aa14.46□□□□□ -0.09
NUP98-212ENST00000488828 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.09
NUP98-212ENST00000488828 STARD3NLO95772 234 aa14.45□□□□□ -0.1
NUP98-212ENST00000488828 CRKLP46109 303 aaKnown RBP14.45□□□□□ -0.1
NUP98-212ENST00000488828 RC3H1Q5TC82 1133 aaKnown RBP14.45□□□□□ -0.1
NUP98-212ENST00000488828 VSIG10Q8N0Z9 540 aa14.45□□□□□ -0.1
NUP98-212ENST00000488828 TEX13AQ9BXU3 409 aaPredicted RBP14.45□□□□□ -0.1
NUP98-212ENST00000488828 SSFA2P28290 1259 aa14.44□□□□□ -0.1
NUP98-212ENST00000488828 POLD1P28340 1107 aa14.44□□□□□ -0.1
NUP98-212ENST00000488828 RFC4P35249 363 aa14.44□□□□□ -0.1
NUP98-212ENST00000488828 MSL1Q68DK7 614 aa14.44□□□□□ -0.1
NUP98-212ENST00000488828 NPM2Q86SE8 214 aaKnown RBP14.44□□□□□ -0.1
NUP98-212ENST00000488828 ARXQ96QS3 562 aa14.44□□□□□ -0.1
NUP98-212ENST00000488828 CCDC87Q9NVE4 849 aa14.44□□□□□ -0.1
NUP98-212ENST00000488828 MRC1P22897 1456 aa14.44□□□□□ -0.1
NUP98-212ENST00000488828 C5P01031 1676 aa14.43□□□□□ -0.1
NUP98-212ENST00000488828 RPS6KA4O75676 772 aa14.43□□□□□ -0.1
NUP98-212ENST00000488828 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
NUP98-212ENST00000488828 TSPYL4Q9UJ04 414 aa14.43□□□□□ -0.1
NUP98-212ENST00000488828 ZNF330Q9Y3S2 320 aaPredicted RBP14.43□□□□□ -0.1
NUP98-212ENST00000488828 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
NUP98-212ENST00000488828 CNTNAP4Q9C0A0 1308 aa14.42□□□□□ -0.1
NUP98-212ENST00000488828 C4BP0C0L5 1744 aa14.42□□□□□ -0.1
NUP98-212ENST00000488828 SNRPA1P09661 255 aaKnown RBP14.42□□□□□ -0.1
NUP98-212ENST00000488828 CYP19A1P11511 503 aaPredicted RBP14.42□□□□□ -0.1
NUP98-212ENST00000488828 DIEXFQ68CQ4 756 aaKnown RBP14.42□□□□□ -0.1
NUP98-212ENST00000488828 AMIGO3Q86WK7 504 aa14.42□□□□□ -0.1
NUP98-212ENST00000488828 ARHGEF1Q92888 912 aaKnown RBP14.42□□□□□ -0.1
NUP98-212ENST00000488828 CLCN6P51797 869 aa14.41□□□□□ -0.1
NUP98-212ENST00000488828 INTS5Q6P9B9 1019 aaKnown RBP14.41□□□□□ -0.1
NUP98-212ENST00000488828 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
NUP98-212ENST00000488828 TRIM35Q9UPQ4 493 aa14.41□□□□□ -0.1
NUP98-212ENST00000488828 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
NUP98-212ENST00000488828 HEG1Q9ULI3 1381 aa14.41□□□□□ -0.1
NUP98-212ENST00000488828 ADAMTS7Q9UKP4 1686 aa14.4□□□□□ -0.1
NUP98-212ENST00000488828 VIRMAQ69YN4 1812 aaKnown RBP14.4□□□□□ -0.1
NUP98-212ENST00000488828 TAF1LQ8IZX4 1826 aa14.39□□□□□ -0.11
NUP98-212ENST00000488828 ZPR1O75312 459 aa14.39□□□□□ -0.11
NUP98-212ENST00000488828 PYGBP11216 843 aa14.39□□□□□ -0.11
NUP98-212ENST00000488828 PTGER2P43116 358 aa14.39□□□□□ -0.11
NUP98-212ENST00000488828 USP16Q9Y5T5 823 aa14.39□□□□□ -0.11
NUP98-212ENST00000488828 KCPQ6ZWJ8 1503 aa14.38□□□□□ -0.11
NUP98-212ENST00000488828 PRAMEF22A3QJZ6 481 aa14.38□□□□□ -0.11
NUP98-212ENST00000488828 A1BGP04217 495 aa14.38□□□□□ -0.11
NUP98-212ENST00000488828 CALD1Q05682 793 aaKnown RBP14.38□□□□□ -0.11
NUP98-212ENST00000488828 ZBTB1Q9Y2K1 713 aa14.38□□□□□ -0.11
NUP98-212ENST00000488828 SRCAPQ6ZRS2 3230 aa14.37□□□□□ -0.11
NUP98-212ENST00000488828 DLG5Q8TDM6 1919 aa14.37□□□□□ -0.11
NUP98-212ENST00000488828 MAP3K13O43283 966 aa14.37□□□□□ -0.11
NUP98-212ENST00000488828 GALR2O43603 387 aaPredicted RBP14.37□□□□□ -0.11
NUP98-212ENST00000488828 EIF4A1P60842 406 aaKnown RBP14.37□□□□□ -0.11
NUP98-212ENST00000488828 NLGN1Q8N2Q7 840 aa14.37□□□□□ -0.11
NUP98-212ENST00000488828 TAOK2Q9UL54 1235 aa14.37□□□□□ -0.11
NUP98-212ENST00000488828 A0A087WZG4 1122 aa14.36□□□□□ -0.11
NUP98-212ENST00000488828 PIP4K2AP48426 406 aaPredicted RBP14.36□□□□□ -0.11
NUP98-212ENST00000488828 MS4A3Q96HJ5 214 aa14.36□□□□□ -0.11
NUP98-212ENST00000488828 BABAM1Q9NWV8 329 aa14.36□□□□□ -0.11
NUP98-212ENST00000488828 SRP68Q9UHB9 627 aaKnown RBP14.36□□□□□ -0.11
NUP98-212ENST00000488828 CASZ1Q86V15 1759 aa14.36□□□□□ -0.11
NUP98-212ENST00000488828 RGL2O15211 777 aa14.35□□□□□ -0.11
NUP98-212ENST00000488828 GIGYF1O75420 1035 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms