RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 SBF1O95248 1867 aa15.73■□□□□ 0.11
HLA-DOB-209ENST00000488325 ZC3H4Q9UPT8 1303 aaKnown RBP15.72■□□□□ 0.11
HLA-DOB-209ENST00000488325 C4AP0C0L4 1744 aa15.72■□□□□ 0.11
HLA-DOB-209ENST00000488325 LOC102724428A0A0B4J2F2 783 aa15.72■□□□□ 0.11
HLA-DOB-209ENST00000488325 HMOX1P09601 288 aa15.72■□□□□ 0.11
HLA-DOB-209ENST00000488325 SIK1P57059 783 aa15.72■□□□□ 0.11
HLA-DOB-209ENST00000488325 RAPGEF4Q8WZA2 1011 aa15.72■□□□□ 0.11
HLA-DOB-209ENST00000488325 AIDAQ96BJ3 306 aa15.72■□□□□ 0.11
HLA-DOB-209ENST00000488325 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
HLA-DOB-209ENST00000488325 PCDH11XQ9BZA7 1347 aa15.71■□□□□ 0.11
HLA-DOB-209ENST00000488325 PCDH11YQ9BZA8 1340 aa15.71■□□□□ 0.11
HLA-DOB-209ENST00000488325 GLTPD2A6NH11 291 aa15.71■□□□□ 0.11
HLA-DOB-209ENST00000488325 TMPOP42166 694 aaKnown RBP15.71■□□□□ 0.11
HLA-DOB-209ENST00000488325 WDR63Q8IWG1 891 aa15.71■□□□□ 0.11
HLA-DOB-209ENST00000488325 USHBP1Q8N6Y0 703 aa15.71■□□□□ 0.11
HLA-DOB-209ENST00000488325 ITGB4P16144 1822 aa15.71■□□□□ 0.1
HLA-DOB-209ENST00000488325 E9PSI1 815 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 NEFLP07196 543 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 LBX1P52954 281 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 ITPK1Q13572 414 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 NBPF6Q5VWK0 638 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 SULT6B1Q6IMI4 303 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 PIGBQ92521 554 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 NBPF4Q96M43 638 aa15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 RRP7AQ9Y3A4 280 aaKnown RBP15.7■□□□□ 0.1
HLA-DOB-209ENST00000488325 TATP17735 454 aaPredicted RBP15.69■□□□□ 0.1
HLA-DOB-209ENST00000488325 RASSF7Q02833 373 aa15.69■□□□□ 0.1
HLA-DOB-209ENST00000488325 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
HLA-DOB-209ENST00000488325 NFE2L2Q16236 605 aa15.69■□□□□ 0.1
HLA-DOB-209ENST00000488325 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
HLA-DOB-209ENST00000488325 CNTNAP1P78357 1384 aa15.69■□□□□ 0.1
HLA-DOB-209ENST00000488325 CYP27B1O15528 508 aa15.68■□□□□ 0.1
HLA-DOB-209ENST00000488325 RGS19P49795 217 aa15.68■□□□□ 0.1
HLA-DOB-209ENST00000488325 EYA1Q99502 592 aa15.68■□□□□ 0.1
HLA-DOB-209ENST00000488325 GTF3C3Q9Y5Q9 886 aa15.68■□□□□ 0.1
HLA-DOB-209ENST00000488325 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
HLA-DOB-209ENST00000488325 KDRP35968 1356 aa15.67■□□□□ 0.1
HLA-DOB-209ENST00000488325 RIPK4P57078 832 aa15.67■□□□□ 0.1
HLA-DOB-209ENST00000488325 SLFN5Q08AF3 891 aa15.67■□□□□ 0.1
HLA-DOB-209ENST00000488325 TRAPPC3LQ5T215 181 aa15.67■□□□□ 0.1
HLA-DOB-209ENST00000488325 CDCA7LQ96GN5 454 aa15.67■□□□□ 0.1
HLA-DOB-209ENST00000488325 GYS1P13807 737 aa15.66■□□□□ 0.1
HLA-DOB-209ENST00000488325 ATP6V1AP38606 617 aa15.66■□□□□ 0.1
HLA-DOB-209ENST00000488325 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
HLA-DOB-209ENST00000488325 RTCBQ9Y3I0 505 aaKnown RBP15.66■□□□□ 0.1
HLA-DOB-209ENST00000488325 CCDC85CA6NKD9 419 aa15.65■□□□□ 0.1
HLA-DOB-209ENST00000488325 POTECB2RU33 542 aa15.65■□□□□ 0.1
HLA-DOB-209ENST00000488325 CHRNA5P30532 468 aa15.65■□□□□ 0.1
HLA-DOB-209ENST00000488325 AEBP1Q8IUX7 1158 aa15.65■□□□□ 0.1
HLA-DOB-209ENST00000488325 WBP1LQ9NX94 342 aa15.65■□□□□ 0.1
HLA-DOB-209ENST00000488325 IL16Q14005 1332 aa15.65■□□□□ 0.1
HLA-DOB-209ENST00000488325 LMNB1P20700 586 aa15.64■□□□□ 0.09
HLA-DOB-209ENST00000488325 DUSP27Q5VZP5 1158 aa15.64■□□□□ 0.09
HLA-DOB-209ENST00000488325 TRMT2AQ8IZ69 625 aaKnown RBP15.64■□□□□ 0.09
HLA-DOB-209ENST00000488325 ARHGEF1Q92888 912 aaKnown RBP15.64■□□□□ 0.09
HLA-DOB-209ENST00000488325 PHACTR3Q96KR7 559 aa15.64■□□□□ 0.09
HLA-DOB-209ENST00000488325 MYH16Q9H6N6 1097 aa15.64■□□□□ 0.09
HLA-DOB-209ENST00000488325 ASAP1Q9ULH1 1129 aa15.64■□□□□ 0.09
HLA-DOB-209ENST00000488325 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
HLA-DOB-209ENST00000488325 HSPA8P11142 646 aaKnown RBP15.63■□□□□ 0.09
HLA-DOB-209ENST00000488325 VEGFBP49765 207 aa15.63■□□□□ 0.09
HLA-DOB-209ENST00000488325 CHADLQ6NUI6 762 aa15.63■□□□□ 0.09
HLA-DOB-209ENST00000488325 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
HLA-DOB-209ENST00000488325 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
HLA-DOB-209ENST00000488325 RCAN3Q9UKA8 241 aa15.62■□□□□ 0.09
HLA-DOB-209ENST00000488325 TIAM2Q8IVF5 1701 aa15.62■□□□□ 0.09
HLA-DOB-209ENST00000488325 RFC4P35249 363 aa15.61■□□□□ 0.09
HLA-DOB-209ENST00000488325 TMOD3Q9NYL9 352 aa15.6■□□□□ 0.09
HLA-DOB-209ENST00000488325 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
HLA-DOB-209ENST00000488325 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
HLA-DOB-209ENST00000488325 POTEIP0CG38 1075 aa15.58■□□□□ 0.08
HLA-DOB-209ENST00000488325 POTEJP0CG39 1038 aa15.58■□□□□ 0.08
HLA-DOB-209ENST00000488325 DDR1Q08345 913 aa15.58■□□□□ 0.08
HLA-DOB-209ENST00000488325 DPY19L2Q6NUT2 758 aa15.58■□□□□ 0.08
HLA-DOB-209ENST00000488325 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
HLA-DOB-209ENST00000488325 VIRMAQ69YN4 1812 aaKnown RBP15.58■□□□□ 0.08
HLA-DOB-209ENST00000488325 TNRC18O15417 2968 aaPredicted RBP15.58■□□□□ 0.08
HLA-DOB-209ENST00000488325 HTATSF1O43719 755 aaKnown RBP15.57■□□□□ 0.08
HLA-DOB-209ENST00000488325 RPS6KA4O75676 772 aa15.57■□□□□ 0.08
HLA-DOB-209ENST00000488325 CT47B1P0C2W7 299 aaPredicted RBP15.57■□□□□ 0.08
HLA-DOB-209ENST00000488325 RC3H1Q5TC82 1133 aaKnown RBP15.57■□□□□ 0.08
HLA-DOB-209ENST00000488325 RTF1Q92541 710 aaKnown RBP15.57■□□□□ 0.08
HLA-DOB-209ENST00000488325 ATG3Q9NT62 314 aa15.57■□□□□ 0.08
HLA-DOB-209ENST00000488325 RNF123Q5XPI4 1314 aa15.57■□□□□ 0.08
HLA-DOB-209ENST00000488325 PDE4DIPQ5VU43 2346 aa15.56■□□□□ 0.08
HLA-DOB-209ENST00000488325 GNAI1P63096 354 aa15.56■□□□□ 0.08
HLA-DOB-209ENST00000488325 MTHFSDQ2M296 383 aaKnown RBP15.56■□□□□ 0.08
HLA-DOB-209ENST00000488325 AMOTQ4VCS5 1084 aa15.56■□□□□ 0.08
HLA-DOB-209ENST00000488325 SLC4A9Q96Q91 983 aa15.56■□□□□ 0.08
HLA-DOB-209ENST00000488325 PASKQ96RG2 1323 aa15.56■□□□□ 0.08
HLA-DOB-209ENST00000488325 CCDC88AQ3V6T2 1871 aa15.55■□□□□ 0.08
HLA-DOB-209ENST00000488325 CNTNAP4Q9C0A0 1308 aa15.55■□□□□ 0.08
HLA-DOB-209ENST00000488325 FKBP8Q14318 412 aa15.55■□□□□ 0.08
HLA-DOB-209ENST00000488325 PLEKHO1Q53GL0 409 aaPredicted RBP15.55■□□□□ 0.08
HLA-DOB-209ENST00000488325 ERICH6BQ5W0A0 696 aa15.55■□□□□ 0.08
HLA-DOB-209ENST00000488325 IFT57Q9NWB7 429 aa15.55■□□□□ 0.08
HLA-DOB-209ENST00000488325 DLG5Q8TDM6 1919 aa15.55■□□□□ 0.08
HLA-DOB-209ENST00000488325 TMEM88BA6NKF7 163 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms