RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
SFXN3-206ENST00000487721 NPM2Q86SE8 214 aaKnown RBP16.02■□□□□ 0.16
SFXN3-206ENST00000487721 MRS2Q9HD23 443 aa16.02■□□□□ 0.16
SFXN3-206ENST00000487721 WWC3Q9ULE0 1092 aa16.02■□□□□ 0.16
SFXN3-206ENST00000487721 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
SFXN3-206ENST00000487721 CYP19A1P11511 503 aaPredicted RBP16.01■□□□□ 0.15
SFXN3-206ENST00000487721 GPBP1L1Q9HC44 474 aaPredicted RBP16.01■□□□□ 0.15
SFXN3-206ENST00000487721 TAF1LQ8IZX4 1826 aa16.01■□□□□ 0.15
SFXN3-206ENST00000487721 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
SFXN3-206ENST00000487721 ADAMTS7Q9UKP4 1686 aa16■□□□□ 0.15
SFXN3-206ENST00000487721 SNRPA1P09661 255 aaKnown RBP16■□□□□ 0.15
SFXN3-206ENST00000487721 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
SFXN3-206ENST00000487721 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
SFXN3-206ENST00000487721 ATP10DQ9P241 1426 aa16■□□□□ 0.15
SFXN3-206ENST00000487721 DLG5Q8TDM6 1919 aa16■□□□□ 0.15
SFXN3-206ENST00000487721 MMP10P09238 476 aa15.99■□□□□ 0.15
SFXN3-206ENST00000487721 INTS5Q6P9B9 1019 aaKnown RBP15.99■□□□□ 0.15
SFXN3-206ENST00000487721 NLGN1Q8N2Q7 840 aa15.99■□□□□ 0.15
SFXN3-206ENST00000487721 KCNQ3O43525 872 aa15.98■□□□□ 0.15
SFXN3-206ENST00000487721 ZPR1O75312 459 aa15.98■□□□□ 0.15
SFXN3-206ENST00000487721 ZNF526Q8TF50 670 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-206ENST00000487721 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
SFXN3-206ENST00000487721 MIS18AQ9NYP9 233 aa15.98■□□□□ 0.15
SFXN3-206ENST00000487721 A0A087WZG4 1122 aa15.97■□□□□ 0.15
SFXN3-206ENST00000487721 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
SFXN3-206ENST00000487721 THUMPD2Q9BTF0 503 aaKnown RBP15.97■□□□□ 0.15
SFXN3-206ENST00000487721 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
SFXN3-206ENST00000487721 ZNF831Q5JPB2 1677 aa15.97■□□□□ 0.15
SFXN3-206ENST00000487721 KCPQ6ZWJ8 1503 aa15.97■□□□□ 0.15
SFXN3-206ENST00000487721 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.15
SFXN3-206ENST00000487721 ZBTB1Q9Y2K1 713 aa15.96■□□□□ 0.15
SFXN3-206ENST00000487721 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
SFXN3-206ENST00000487721 APAF1O14727 1248 aa15.95■□□□□ 0.14
SFXN3-206ENST00000487721 TGFB2P61812 414 aa15.95■□□□□ 0.14
SFXN3-206ENST00000487721 CCDC184Q52MB2 194 aa15.95■□□□□ 0.14
SFXN3-206ENST00000487721 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
SFXN3-206ENST00000487721 A0A0G2JLW4 131 aa15.94■□□□□ 0.14
SFXN3-206ENST00000487721 IL6STP40189 918 aaPredicted RBP15.94■□□□□ 0.14
SFXN3-206ENST00000487721 ZNF330Q9Y3S2 320 aaPredicted RBP15.94■□□□□ 0.14
SFXN3-206ENST00000487721 ADCY9O60503 1353 aa15.94■□□□□ 0.14
SFXN3-206ENST00000487721 GYS1P13807 737 aa15.93■□□□□ 0.14
SFXN3-206ENST00000487721 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
SFXN3-206ENST00000487721 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
SFXN3-206ENST00000487721 LAS1LQ9Y4W2 734 aaKnown RBP15.93■□□□□ 0.14
SFXN3-206ENST00000487721 USP16Q9Y5T5 823 aa15.93■□□□□ 0.14
SFXN3-206ENST00000487721 USP42Q9H9J4 1324 aaKnown RBP15.93■□□□□ 0.14
SFXN3-206ENST00000487721 COL15A1P39059 1388 aa15.92■□□□□ 0.14
SFXN3-206ENST00000487721 A1BGP04217 495 aa15.92■□□□□ 0.14
SFXN3-206ENST00000487721 EIF5P55010 431 aaKnown RBP15.92■□□□□ 0.14
SFXN3-206ENST00000487721 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
SFXN3-206ENST00000487721 BCS1LQ9Y276 419 aa15.92■□□□□ 0.14
SFXN3-206ENST00000487721 PARP3Q9Y6F1 533 aa15.92■□□□□ 0.14
SFXN3-206ENST00000487721 SRP68Q9UHB9 627 aaKnown RBP15.91■□□□□ 0.14
SFXN3-206ENST00000487721 DPEP1P16444 411 aa15.9■□□□□ 0.14
SFXN3-206ENST00000487721 HSPA6P17066 643 aa15.9■□□□□ 0.14
SFXN3-206ENST00000487721 USPL1Q5W0Q7 1092 aa15.9■□□□□ 0.14
SFXN3-206ENST00000487721 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
SFXN3-206ENST00000487721 CICQ96RK0 1608 aaPredicted RBP15.9■□□□□ 0.14
SFXN3-206ENST00000487721 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.13
SFXN3-206ENST00000487721 CHL1O00533 1208 aa15.89■□□□□ 0.13
SFXN3-206ENST00000487721 GNAI1P63096 354 aa15.89■□□□□ 0.13
SFXN3-206ENST00000487721 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
SFXN3-206ENST00000487721 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
SFXN3-206ENST00000487721 PXDNLA1KZ92 1463 aa15.89■□□□□ 0.13
SFXN3-206ENST00000487721 TJP1Q07157 1748 aa15.88■□□□□ 0.13
SFXN3-206ENST00000487721 KIF3CO14782 793 aa15.88■□□□□ 0.13
SFXN3-206ENST00000487721 FKBP8Q14318 412 aa15.88■□□□□ 0.13
SFXN3-206ENST00000487721 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
SFXN3-206ENST00000487721 MIER1Q8N108 512 aa15.88■□□□□ 0.13
SFXN3-206ENST00000487721 COL5A3P25940 1745 aaPredicted RBP15.88■□□□□ 0.13
SFXN3-206ENST00000487721 KCNA3P22001 575 aa15.87■□□□□ 0.13
SFXN3-206ENST00000487721 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
SFXN3-206ENST00000487721 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
SFXN3-206ENST00000487721 SIPA1L3O60292 1781 aaPredicted RBP15.87■□□□□ 0.13
SFXN3-206ENST00000487721 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
SFXN3-206ENST00000487721 CCDC27Q2M243 656 aa15.86■□□□□ 0.13
SFXN3-206ENST00000487721 DZIP3Q86Y13 1208 aaKnown RBP15.86■□□□□ 0.13
SFXN3-206ENST00000487721 ZNF652Q9Y2D9 606 aa15.86■□□□□ 0.13
SFXN3-206ENST00000487721 CCER2I3L3R5 266 aa15.85■□□□□ 0.13
SFXN3-206ENST00000487721 EIF2S2P20042 333 aaKnown RBP15.85■□□□□ 0.13
SFXN3-206ENST00000487721 NGEFQ8N5V2 710 aa15.85■□□□□ 0.13
SFXN3-206ENST00000487721 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
SFXN3-206ENST00000487721 PIM2Q9P1W9 311 aa15.85■□□□□ 0.13
SFXN3-206ENST00000487721 ERBB4Q15303 1308 aa15.85■□□□□ 0.13
SFXN3-206ENST00000487721 C10orf71Q711Q0 1435 aa15.85■□□□□ 0.13
SFXN3-206ENST00000487721 TM4SF1P30408 202 aa15.84■□□□□ 0.13
SFXN3-206ENST00000487721 PIP4K2AP48426 406 aaPredicted RBP15.84■□□□□ 0.13
SFXN3-206ENST00000487721 CEP350Q5VT06 3117 aa15.83■□□□□ 0.12
SFXN3-206ENST00000487721 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
SFXN3-206ENST00000487721 HOXB7P09629 217 aa15.83■□□□□ 0.12
SFXN3-206ENST00000487721 IFFO2Q5TF58 517 aa15.83■□□□□ 0.12
SFXN3-206ENST00000487721 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
SFXN3-206ENST00000487721 CLEC4GQ6UXB4 293 aa15.83■□□□□ 0.12
SFXN3-206ENST00000487721 KIF6Q6ZMV9 814 aa15.83■□□□□ 0.12
SFXN3-206ENST00000487721 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
SFXN3-206ENST00000487721 SETDB2Q96T68 719 aa15.83■□□□□ 0.12
SFXN3-206ENST00000487721 RGL2O15211 777 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 NPHP1O15259 732 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 TOMM70O94826 608 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 CAMTA2O94983 1202 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms