RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 YY1P25490 414 aa21.04■□□□□ 0.96
GABPA-203ENST00000487266 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
GABPA-203ENST00000487266 FKBP8Q14318 412 aa21.04■□□□□ 0.96
GABPA-203ENST00000487266 THUMPD2Q9BTF0 503 aaKnown RBP21.04■□□□□ 0.96
GABPA-203ENST00000487266 KDM3BQ7LBC6 1761 aa21.04■□□□□ 0.96
GABPA-203ENST00000487266 N4BP2Q86UW6 1770 aaPredicted RBP21.04■□□□□ 0.96
GABPA-203ENST00000487266 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
GABPA-203ENST00000487266 PRAMEF22A3QJZ6 481 aa21.03■□□□□ 0.96
GABPA-203ENST00000487266 NEFMP07197 916 aa21.03■□□□□ 0.96
GABPA-203ENST00000487266 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
GABPA-203ENST00000487266 NLGN1Q8N2Q7 840 aa21.03■□□□□ 0.96
GABPA-203ENST00000487266 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
GABPA-203ENST00000487266 PRKRIP1Q9H875 184 aaPredicted RBP21.03■□□□□ 0.96
GABPA-203ENST00000487266 MIS18AQ9NYP9 233 aa21.02■□□□□ 0.96
GABPA-203ENST00000487266 C10orf71Q711Q0 1435 aa21.02■□□□□ 0.96
GABPA-203ENST00000487266 HTATSF1O43719 755 aaKnown RBP21.01■□□□□ 0.95
GABPA-203ENST00000487266 DDR1Q08345 913 aa21.01■□□□□ 0.95
GABPA-203ENST00000487266 USPL1Q5W0Q7 1092 aa21.01■□□□□ 0.95
GABPA-203ENST00000487266 CCDC146Q8IYE0 955 aa21.01■□□□□ 0.95
GABPA-203ENST00000487266 SCN7AQ01118 1682 aa21.01■□□□□ 0.95
GABPA-203ENST00000487266 PXDNLA1KZ92 1463 aa21■□□□□ 0.95
GABPA-203ENST00000487266 LAMB4A4D0S4 1761 aa21■□□□□ 0.95
GABPA-203ENST00000487266 AFDNP55196 1824 aaKnown RBP20.99■□□□□ 0.95
GABPA-203ENST00000487266 STARD3NLO95772 234 aa20.99■□□□□ 0.95
GABPA-203ENST00000487266 PIP4K2AP48426 406 aaPredicted RBP20.99■□□□□ 0.95
GABPA-203ENST00000487266 ZNF330Q9Y3S2 320 aaPredicted RBP20.99■□□□□ 0.95
GABPA-203ENST00000487266 ZPR1O75312 459 aa20.98■□□□□ 0.95
GABPA-203ENST00000487266 A1BGP04217 495 aa20.98■□□□□ 0.95
GABPA-203ENST00000487266 BCL2L12Q9HB09 334 aa20.98■□□□□ 0.95
GABPA-203ENST00000487266 EIF5P55010 431 aaKnown RBP20.97■□□□□ 0.95
GABPA-203ENST00000487266 NARFQ9UHQ1 456 aa20.97■□□□□ 0.95
GABPA-203ENST00000487266 RRP7AQ9Y3A4 280 aaKnown RBP20.97■□□□□ 0.95
GABPA-203ENST00000487266 USP16Q9Y5T5 823 aa20.97■□□□□ 0.95
GABPA-203ENST00000487266 PARP3Q9Y6F1 533 aa20.97■□□□□ 0.95
GABPA-203ENST00000487266 BCORQ6W2J9 1755 aa20.97■□□□□ 0.95
GABPA-203ENST00000487266 TAF7Q15545 349 aaPredicted RBP20.96■□□□□ 0.95
GABPA-203ENST00000487266 PNNQ9H307 717 aaKnown RBP20.96■□□□□ 0.95
GABPA-203ENST00000487266 BRCA1P38398 1863 aaKnown RBP20.96■□□□□ 0.95
GABPA-203ENST00000487266 TEX13AQ9BXU3 409 aaPredicted RBP20.95■□□□□ 0.94
GABPA-203ENST00000487266 POLRMTO00411 1230 aaKnown RBP20.94■□□□□ 0.94
GABPA-203ENST00000487266 RIPK4P57078 832 aa20.94■□□□□ 0.94
GABPA-203ENST00000487266 NFIXQ14938 502 aa20.94■□□□□ 0.94
GABPA-203ENST00000487266 WDR43Q15061 677 aaKnown RBP eCLIP20.94■□□□□ 0.94
GABPA-203ENST00000487266 NRXN2Q9P2S2 1712 aa20.94■□□□□ 0.94
GABPA-203ENST00000487266 SNRPA1P09661 255 aaKnown RBP20.93■□□□□ 0.94
GABPA-203ENST00000487266 TMPOP42166 694 aaKnown RBP20.93■□□□□ 0.94
GABPA-203ENST00000487266 ADAMTS8Q9UP79 889 aa20.93■□□□□ 0.94
GABPA-203ENST00000487266 TBC1D2BQ9UPU7 963 aa20.93■□□□□ 0.94
GABPA-203ENST00000487266 A0A0G2JLW4 131 aa20.92■□□□□ 0.94
GABPA-203ENST00000487266 TM4SF1P30408 202 aa20.92■□□□□ 0.94
GABPA-203ENST00000487266 IL6STP40189 918 aaPredicted RBP20.92■□□□□ 0.94
GABPA-203ENST00000487266 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
GABPA-203ENST00000487266 DPEP1P16444 411 aa20.91■□□□□ 0.94
GABPA-203ENST00000487266 NEUROD2Q15784 382 aa20.91■□□□□ 0.94
GABPA-203ENST00000487266 BICDL1Q6ZP65 573 aa20.91■□□□□ 0.94
GABPA-203ENST00000487266 CCDC184Q52MB2 194 aa20.9■□□□□ 0.94
GABPA-203ENST00000487266 CARMIL3Q8ND23 1372 aa20.89■□□□□ 0.93
GABPA-203ENST00000487266 NBPF26B4DH59 902 aa20.89■□□□□ 0.93
GABPA-203ENST00000487266 NBPF10Q6P3W6 841 aaKnown RBP20.89■□□□□ 0.93
GABPA-203ENST00000487266 NBPF15Q8N660 670 aa20.89■□□□□ 0.93
GABPA-203ENST00000487266 A0A087WZG4 1122 aa20.88■□□□□ 0.93
GABPA-203ENST00000487266 GRIN3BO60391 1043 aa20.88■□□□□ 0.93
GABPA-203ENST00000487266 EIF4A1P60842 406 aaKnown RBP20.88■□□□□ 0.93
GABPA-203ENST00000487266 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
GABPA-203ENST00000487266 PNISRQ8TF01 805 aaKnown RBP20.88■□□□□ 0.93
GABPA-203ENST00000487266 RUNDC1Q96C34 613 aa20.88■□□□□ 0.93
GABPA-203ENST00000487266 CAMTA2O94983 1202 aa20.87■□□□□ 0.93
GABPA-203ENST00000487266 TGFB2P61812 414 aa20.87■□□□□ 0.93
GABPA-203ENST00000487266 ANKRD31Q8N7Z5 1873 aa20.87■□□□□ 0.93
GABPA-203ENST00000487266 GIGYF1O75420 1035 aaPredicted RBP20.86■□□□□ 0.93
GABPA-203ENST00000487266 CHRNA5P30532 468 aa20.86■□□□□ 0.93
GABPA-203ENST00000487266 DZIP3Q86Y13 1208 aaKnown RBP20.86■□□□□ 0.93
GABPA-203ENST00000487266 ZNF784Q8NCA9 323 aaPredicted RBP20.86■□□□□ 0.93
GABPA-203ENST00000487266 TSPYL4Q9UJ04 414 aa20.86■□□□□ 0.93
GABPA-203ENST00000487266 SERPINB2P05120 415 aa20.85■□□□□ 0.93
GABPA-203ENST00000487266 KCNA3P22001 575 aa20.85■□□□□ 0.93
GABPA-203ENST00000487266 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
GABPA-203ENST00000487266 BCS1LQ9Y276 419 aa20.85■□□□□ 0.93
GABPA-203ENST00000487266 ARFGEF1Q9Y6D6 1849 aa20.85■□□□□ 0.93
GABPA-203ENST00000487266 DLEC1Q9Y238 1755 aa20.85■□□□□ 0.93
GABPA-203ENST00000487266 LMOD3Q0VAK6 560 aa20.84■□□□□ 0.93
GABPA-203ENST00000487266 COL11A2P13942 1736 aaPredicted RBP20.84■□□□□ 0.93
GABPA-203ENST00000487266 NPM2Q86SE8 214 aaKnown RBP20.83■□□□□ 0.93
GABPA-203ENST00000487266 CCDC24Q8N4L8 307 aa20.83■□□□□ 0.93
GABPA-203ENST00000487266 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
GABPA-203ENST00000487266 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
GABPA-203ENST00000487266 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
GABPA-203ENST00000487266 NUP98P52948 1817 aa20.79■□□□□ 0.92
GABPA-203ENST00000487266 APAF1O14727 1248 aa20.79■□□□□ 0.92
GABPA-203ENST00000487266 PRR5LQ6MZQ0 368 aa20.79■□□□□ 0.92
GABPA-203ENST00000487266 LAS1LQ9Y4W2 734 aaKnown RBP20.79■□□□□ 0.92
GABPA-203ENST00000487266 MYL6BP14649 208 aa20.78■□□□□ 0.92
GABPA-203ENST00000487266 HLFQ16534 295 aa20.78■□□□□ 0.92
GABPA-203ENST00000487266 PIM2Q9P1W9 311 aa20.78■□□□□ 0.92
GABPA-203ENST00000487266 CACNA1SQ13698 1873 aa20.77■□□□□ 0.92
GABPA-203ENST00000487266 ADCY9O60503 1353 aa20.77■□□□□ 0.92
GABPA-203ENST00000487266 SETDB2Q96T68 719 aa20.77■□□□□ 0.92
GABPA-203ENST00000487266 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
GABPA-203ENST00000487266 ANXA1P04083 346 aa20.76■□□□□ 0.91
GABPA-203ENST00000487266 EIF2S2P20042 333 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms