RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 PIK3C2AO00443 1686 aa9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 TTC21BQ7Z4L5 1316 aa9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 LCE2DQ5TA82 110 aaPredicted RBP9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 LARP1Q6PKG0 1096 aaKnown RBP9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 PCGF6Q9BYE7 350 aa9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 SEPT9Q9UHD8 586 aaPredicted RBP9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 VPS9D1Q9Y2B5 631 aa9.1□□□□□ -0.95
SOX2-OT-210ENST00000487240 AKAP12Q02952 1782 aa9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 SH3D19Q5HYK7 790 aa9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 PCMTD1Q96MG8 357 aaPredicted RBP9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 TIMELESSQ9UNS1 1208 aa9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 LMO7Q8WWI1 1683 aa9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 THSD7AQ9UPZ6 1657 aa9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 SLIT3O75094 1523 aa9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 SBNO2Q9Y2G9 1366 aa9.09□□□□□ -0.95
SOX2-OT-210ENST00000487240 CPSF1Q10570 1443 aaKnown RBP9.08□□□□□ -0.96
SOX2-OT-210ENST00000487240 ST20-MTHFSA0A0A6YYL1 179 aa9.08□□□□□ -0.96
SOX2-OT-210ENST00000487240 SLC12A5Q9H2X9 1139 aa9.08□□□□□ -0.96
SOX2-OT-210ENST00000487240 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
SOX2-OT-210ENST00000487240 TTC21AQ8NDW8 1320 aa9.07□□□□□ -0.96
SOX2-OT-210ENST00000487240 CD46P15529 392 aa9.07□□□□□ -0.96
SOX2-OT-210ENST00000487240 HDGFL2Q7Z4V5 671 aaPredicted RBP9.07□□□□□ -0.96
SOX2-OT-210ENST00000487240 TCP11L2Q8N4U5 519 aa9.07□□□□□ -0.96
SOX2-OT-210ENST00000487240 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
SOX2-OT-210ENST00000487240 MON2Q7Z3U7 1717 aa9.07□□□□□ -0.96
SOX2-OT-210ENST00000487240 TK2O00142 265 aa9.06□□□□□ -0.96
SOX2-OT-210ENST00000487240 PDE3BQ13370 1112 aa9.06□□□□□ -0.96
SOX2-OT-210ENST00000487240 DIXDC1Q155Q3 683 aa9.06□□□□□ -0.96
SOX2-OT-210ENST00000487240 NME9Q86XW9 330 aa9.06□□□□□ -0.96
SOX2-OT-210ENST00000487240 RDH13Q8NBN7 331 aa9.06□□□□□ -0.96
SOX2-OT-210ENST00000487240 KCNH5Q8NCM2 988 aa9.06□□□□□ -0.96
SOX2-OT-210ENST00000487240 AATKQ6ZMQ8 1374 aa9.06□□□□□ -0.96
SOX2-OT-210ENST00000487240 CD163L1Q9NR16 1453 aa9.06□□□□□ -0.96
SOX2-OT-210ENST00000487240 CRB1P82279 1406 aa9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 CSB-PGBD3P0DP91 1061 aa9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 BAG6P46379 1132 aa9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 LSM11P83369 360 aaKnown RBP eCLIP9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 SKIV2LQ15477 1246 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 TOM1L2Q6ZVM7 507 aa9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 TESK2Q96S53 571 aa9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 TBC1D2Q9BYX2 928 aa9.05□□□□□ -0.96
SOX2-OT-210ENST00000487240 COL18A1P39060 1754 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 A0A1W2PP64 1363 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 USP47Q96K76 1375 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 TRIM37O94972 964 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 MYSM1Q5VVJ2 828 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 LAPTM4BQ86VI4 370 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 ARHGEF25Q86VW2 580 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 TERF2IPQ9NYB0 399 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 RGPD1P0DJD0 1748 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 NFAT5O94916 1531 aa9.04□□□□□ -0.96
SOX2-OT-210ENST00000487240 BHMG1C9JSJ3 638 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 SLC4A3P48751 1232 aa9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 FAM196AQ6ZSG2 479 aa9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 POLR3EQ9NVU0 708 aa9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 THRAP3Q9Y2W1 955 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 RGPD5Q99666 1765 aa9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 EDC4Q6P2E9 1401 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 WDR17Q8IZU2 1322 aa9.03□□□□□ -0.96
SOX2-OT-210ENST00000487240 TNS1Q9HBL0 1735 aaKnown RBP9.02□□□□□ -0.96
SOX2-OT-210ENST00000487240 USP31Q70CQ4 1352 aa9.02□□□□□ -0.97
SOX2-OT-210ENST00000487240 SRCAPQ6ZRS2 3230 aa9.02□□□□□ -0.97
SOX2-OT-210ENST00000487240 TMF1P82094 1093 aa9.02□□□□□ -0.97
SOX2-OT-210ENST00000487240 ADGRD1Q6QNK2 874 aa9.02□□□□□ -0.97
SOX2-OT-210ENST00000487240 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-210ENST00000487240 APBA3O96018 575 aa9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 EZH2Q15910 746 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 DDB1Q16531 1140 aa9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 SPIRE2Q8WWL2 714 aa9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 PUS7Q96PZ0 661 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 PARP4Q9UKK3 1724 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 LRRC37A3O60309 1634 aa9.01□□□□□ -0.97
SOX2-OT-210ENST00000487240 NINLQ9Y2I6 1382 aa9□□□□□ -0.97
SOX2-OT-210ENST00000487240 LTN1O94822 1766 aa9□□□□□ -0.97
SOX2-OT-210ENST00000487240 SLF2Q8IX21 1173 aa9□□□□□ -0.97
SOX2-OT-210ENST00000487240 CARD10Q9BWT7 1032 aa9□□□□□ -0.97
SOX2-OT-210ENST00000487240 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
SOX2-OT-210ENST00000487240 WNK3Q9BYP7 1800 aa9□□□□□ -0.97
SOX2-OT-210ENST00000487240 USP54Q70EL1 1684 aa9□□□□□ -0.97
SOX2-OT-210ENST00000487240 OVOS2A0A0J9YW53 1432 aa8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 OVOS2Q6IE36 1432 aa8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 SLC10A3P09131 477 aa8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 PROCA1Q8NCQ7 364 aaPredicted RBP8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 LTV1Q96GA3 475 aaPredicted RBP8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 COG3Q96JB2 828 aa8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 CLSPNQ9HAW4 1339 aa8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 ANKRD36BQ8N2N9 1353 aa8.99□□□□□ -0.97
SOX2-OT-210ENST00000487240 OVOS2A0A0G2JMS6 1433 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms