RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
KRIT1-223	ENST00000487168	VIRMA	Q69YN4	1812 aa	Known RBP	13.2	□□□□□ -0.3
KRIT1-223	ENST00000487168	NEFM	P07197	916 aa		13.19	□□□□□ -0.3
KRIT1-223	ENST00000487168	PRKAR2B	P31323	418 aa		13.19	□□□□□ -0.3
KRIT1-223	ENST00000487168	NFATC2IP	Q8NCF5	419 aa		13.19	□□□□□ -0.3
KRIT1-223	ENST00000487168	AK7	Q96M32	723 aa		13.19	□□□□□ -0.3
KRIT1-223	ENST00000487168	SIPA1L3	O60292	1781 aa	Predicted RBP	13.19	□□□□□ -0.3
KRIT1-223	ENST00000487168	UBR2	Q8IWV8	1755 aa		13.19	□□□□□ -0.3
KRIT1-223	ENST00000487168	ATP6V1A	P38606	617 aa		13.18	□□□□□ -0.3
KRIT1-223	ENST00000487168	DDX10	Q13206	875 aa	Known RBP	13.18	□□□□□ -0.3
KRIT1-223	ENST00000487168	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.18	□□□□□ -0.3
KRIT1-223	ENST00000487168	POLD1	P28340	1107 aa		13.17	□□□□□ -0.3
KRIT1-223	ENST00000487168	GOLGB1	Q14789	3259 aa	Known RBP	13.16	□□□□□ -0.3
KRIT1-223	ENST00000487168	ZBTB7A	O95365	584 aa		13.16	□□□□□ -0.3
KRIT1-223	ENST00000487168	TEF	Q10587	303 aa		13.16	□□□□□ -0.3
KRIT1-223	ENST00000487168	ITPK1	Q13572	414 aa		13.16	□□□□□ -0.3
KRIT1-223	ENST00000487168	LINC00116	Q8NCU8	138 aa		13.16	□□□□□ -0.3
KRIT1-223	ENST00000487168	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.16	□□□□□ -0.3
KRIT1-223	ENST00000487168	KCP	Q6ZWJ8	1503 aa		13.16	□□□□□ -0.3
KRIT1-223	ENST00000487168	NUBP1	P53384	320 aa		13.15	□□□□□ -0.3
KRIT1-223	ENST00000487168	PHACTR3	Q96KR7	559 aa		13.15	□□□□□ -0.3
KRIT1-223	ENST00000487168	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.15	□□□□□ -0.3
KRIT1-223	ENST00000487168	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.15	□□□□□ -0.3
KRIT1-223	ENST00000487168	TJP1	Q07157	1748 aa		13.15	□□□□□ -0.3
KRIT1-223	ENST00000487168	UTRN	P46939	3433 aa		13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	KCNQ4	P56696	695 aa		13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	COL23A1	Q86Y22	540 aa	Predicted RBP	13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	IL17RE	Q8NFR9	667 aa		13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	RTF1	Q92541	710 aa	Known RBP	13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	RNF25	Q96BH1	459 aa	Predicted RBP	13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	SLC4A9	Q96Q91	983 aa		13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	ARX	Q96QS3	562 aa		13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	PLEKHF1	Q96S99	279 aa		13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	LGR6	Q9HBX8	967 aa		13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	RTCB	Q9Y3I0	505 aa	Known RBP	13.14	□□□□□ -0.31
KRIT1-223	ENST00000487168	RPS6KA4	O75676	772 aa		13.13	□□□□□ -0.31
KRIT1-223	ENST00000487168	CNGB1	Q14028	1251 aa	Predicted RBP	13.13	□□□□□ -0.31
KRIT1-223	ENST00000487168	LHX8	Q68G74	356 aa		13.13	□□□□□ -0.31
KRIT1-223	ENST00000487168	TTC5	Q8N0Z6	440 aa		13.13	□□□□□ -0.31
KRIT1-223	ENST00000487168	GNPAT	O15228	680 aa		13.12	□□□□□ -0.31
KRIT1-223	ENST00000487168	NBR1	Q14596	966 aa		13.12	□□□□□ -0.31
KRIT1-223	ENST00000487168	ZNF790	Q6PG37	636 aa		13.12	□□□□□ -0.31
KRIT1-223	ENST00000487168	CREBZF	Q9NS37	354 aa		13.12	□□□□□ -0.31
KRIT1-223	ENST00000487168	MAPK8IP3	Q9UPT6	1336 aa		13.12	□□□□□ -0.31
KRIT1-223	ENST00000487168	MYH14	Q7Z406	1995 aa	Known RBP	13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	RIOK3	O14730	519 aa	Known RBP	13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	STARD3NL	O95772	234 aa		13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	LMOD3	Q0VAK6	560 aa		13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	NFE2L2	Q16236	605 aa		13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	TRAPPC3L	Q5T215	181 aa		13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	PNISR	Q8TF01	805 aa	Known RBP	13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	BABAM1	Q9NWV8	329 aa		13.11	□□□□□ -0.31
KRIT1-223	ENST00000487168	HEG1	Q9ULI3	1381 aa		13.1	□□□□□ -0.31
KRIT1-223	ENST00000487168	PTCD1	O75127	700 aa	Known RBP	13.1	□□□□□ -0.31
KRIT1-223	ENST00000487168	CRKL	P46109	303 aa	Known RBP	13.1	□□□□□ -0.31
KRIT1-223	ENST00000487168	DCAF8	Q5TAQ9	597 aa		13.1	□□□□□ -0.31
KRIT1-223	ENST00000487168	NLGN1	Q8N2Q7	840 aa		13.1	□□□□□ -0.31
KRIT1-223	ENST00000487168	FMNL2	Q96PY5	1086 aa		13.1	□□□□□ -0.31
KRIT1-223	ENST00000487168	CD2AP	Q9Y5K6	639 aa		13.1	□□□□□ -0.31
KRIT1-223	ENST00000487168	CYP19A1	P11511	503 aa	Predicted RBP	13.09	□□□□□ -0.31
KRIT1-223	ENST00000487168	SYT17	Q9BSW7	474 aa		13.09	□□□□□ -0.31
KRIT1-223	ENST00000487168	CCDC87	Q9NVE4	849 aa		13.09	□□□□□ -0.31
KRIT1-223	ENST00000487168	C4A	P0C0L4	1744 aa		13.08	□□□□□ -0.32
KRIT1-223	ENST00000487168	INTS5	Q6P9B9	1019 aa	Known RBP	13.08	□□□□□ -0.32
KRIT1-223	ENST00000487168	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.08	□□□□□ -0.32
KRIT1-223	ENST00000487168	SOS1	Q07889	1333 aa	Predicted RBP	13.08	□□□□□ -0.32
KRIT1-223	ENST00000487168	DLG5	Q8TDM6	1919 aa		13.07	□□□□□ -0.32
KRIT1-223	ENST00000487168	BTBD11	A6QL63	1104 aa		13.07	□□□□□ -0.32
KRIT1-223	ENST00000487168	RFC4	P35249	363 aa		13.07	□□□□□ -0.32
KRIT1-223	ENST00000487168	WDR43	Q15061	677 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
KRIT1-223	ENST00000487168	TAF7	Q15545	349 aa	Predicted RBP	13.07	□□□□□ -0.32
KRIT1-223	ENST00000487168	ZNF496	Q96IT1	587 aa	Predicted RBP	13.07	□□□□□ -0.32
KRIT1-223	ENST00000487168	USP42	Q9H9J4	1324 aa	Known RBP	13.07	□□□□□ -0.32
KRIT1-223	ENST00000487168		A0A087WZG4	1122 aa		13.06	□□□□□ -0.32
KRIT1-223	ENST00000487168	SLC39A6	Q13433	755 aa		13.06	□□□□□ -0.32
KRIT1-223	ENST00000487168	AMIGO3	Q86WK7	504 aa		13.06	□□□□□ -0.32
KRIT1-223	ENST00000487168	DNAJC10	Q8IXB1	793 aa		13.06	□□□□□ -0.32
KRIT1-223	ENST00000487168	ARHGEF1	Q92888	912 aa	Known RBP	13.06	□□□□□ -0.32
KRIT1-223	ENST00000487168	KDM3B	Q7LBC6	1761 aa		13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	KIF13B	Q9NQT8	1826 aa		13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	PHF14	O94880	888 aa		13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	SNRPA1	P09661	255 aa	Known RBP	13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	POTEI	P0CG38	1075 aa		13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	IL6ST	P40189	918 aa	Predicted RBP	13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	CLCN6	P51797	869 aa		13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	RUNDC1	Q96C34	613 aa		13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	COL15A1	P39059	1388 aa		13.05	□□□□□ -0.32
KRIT1-223	ENST00000487168	GYS1	P13807	737 aa		13.04	□□□□□ -0.32
KRIT1-223	ENST00000487168	MCM10	Q7L590	875 aa		13.04	□□□□□ -0.32
KRIT1-223	ENST00000487168	FAM212A	Q96EL1	285 aa		13.04	□□□□□ -0.32
KRIT1-223	ENST00000487168	DCBLD2	Q96PD2	775 aa		13.04	□□□□□ -0.32
KRIT1-223	ENST00000487168	LAMB4	A4D0S4	1761 aa		13.03	□□□□□ -0.32
KRIT1-223	ENST00000487168	CHRM1	P11229	460 aa	Predicted RBP	13.03	□□□□□ -0.32
KRIT1-223	ENST00000487168	TMPO	P42166	694 aa	Known RBP	13.03	□□□□□ -0.32
KRIT1-223	ENST00000487168	EIF5	P55010	431 aa	Known RBP	13.03	□□□□□ -0.32
KRIT1-223	ENST00000487168	ZNF579	Q8NAF0	562 aa	Known RBP	13.03	□□□□□ -0.32
KRIT1-223	ENST00000487168	NARF	Q9UHQ1	456 aa		13.03	□□□□□ -0.32
KRIT1-223	ENST00000487168	C10orf71	Q711Q0	1435 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms