RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 GLI2P10070 1586 aa9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 SETBP1Q9Y6X0 1596 aa9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 KIF3BO15066 747 aa9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 PER1O15534 1290 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 HAP1P54257 671 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 KCTD17Q8N5Z5 321 aa9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 ABCA6Q8N139 1617 aa9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 MYO3AQ8NEV4 1616 aa9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 ZC3H13Q5T200 1668 aaKnown RBP9.51□□□□□ -0.89
SMARCAL1-212ENST00000486983 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 CFAP99D6REC4 459 aa9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 F12P00748 615 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 TTLL12Q14166 644 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 TMC1Q8TDI8 760 aa9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 POLR3GLQ9BT43 218 aa9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 ABCC3O15438 1527 aa9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 NPC1L1Q9UHC9 1359 aa9.5□□□□□ -0.89
SMARCAL1-212ENST00000486983 KIF1BO60333 1816 aa9.49□□□□□ -0.89
SMARCAL1-212ENST00000486983 LINC00528Q8N1L1 170 aa9.49□□□□□ -0.89
SMARCAL1-212ENST00000486983 MEIOBQ8N635 442 aa9.49□□□□□ -0.89
SMARCAL1-212ENST00000486983 RNF123Q5XPI4 1314 aa9.49□□□□□ -0.89
SMARCAL1-212ENST00000486983 NPATQ14207 1427 aa9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 ARHGAP31Q2M1Z3 1444 aa9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 BMP2P12643 396 aa9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 NR5A1Q13285 461 aa9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 DNMT3LQ9UJW3 386 aa9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 DIP2CQ9Y2E4 1556 aa9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 MROH2AA6NES4 1674 aa9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-212ENST00000486983 UGGT1Q9NYU2 1555 aa9.47□□□□□ -0.89
SMARCAL1-212ENST00000486983 PIK3C2BO00750 1634 aa9.47□□□□□ -0.89
SMARCAL1-212ENST00000486983 GRM5P41594 1212 aa9.47□□□□□ -0.89
SMARCAL1-212ENST00000486983 KRT76Q01546 638 aa9.47□□□□□ -0.89
SMARCAL1-212ENST00000486983 RSBN1LQ6PCB5 846 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-212ENST00000486983 GIGYF2Q6Y7W6 1299 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-212ENST00000486983 MYOM1P52179 1685 aa9.47□□□□□ -0.89
SMARCAL1-212ENST00000486983 NOS1P29475 1434 aa9.47□□□□□ -0.89
SMARCAL1-212ENST00000486983 CAMSAP1Q5T5Y3 1602 aa9.46□□□□□ -0.89
SMARCAL1-212ENST00000486983 KDM5AP29375 1690 aaKnown RBP9.46□□□□□ -0.89
SMARCAL1-212ENST00000486983 RICTORQ6R327 1708 aa9.46□□□□□ -0.89
SMARCAL1-212ENST00000486983 BCANQ96GW7 911 aa9.46□□□□□ -0.9
SMARCAL1-212ENST00000486983 BEGAINQ9BUH8 593 aa9.46□□□□□ -0.9
SMARCAL1-212ENST00000486983 PCDHB15Q9Y5E8 787 aa9.46□□□□□ -0.9
SMARCAL1-212ENST00000486983 SOS2Q07890 1332 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-212ENST00000486983 RPGRIP1LQ68CZ1 1315 aa9.46□□□□□ -0.9
SMARCAL1-212ENST00000486983 PIK3C2GO75747 1445 aa9.46□□□□□ -0.9
SMARCAL1-212ENST00000486983 GJA5P36382 358 aa9.45□□□□□ -0.9
SMARCAL1-212ENST00000486983 PDE3BQ13370 1112 aa9.45□□□□□ -0.9
SMARCAL1-212ENST00000486983 AMHR2Q16671 573 aa9.45□□□□□ -0.9
SMARCAL1-212ENST00000486983 TBC1D2Q9BYX2 928 aa9.45□□□□□ -0.9
SMARCAL1-212ENST00000486983 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
SMARCAL1-212ENST00000486983 ASXL1Q8IXJ9 1541 aa9.45□□□□□ -0.9
SMARCAL1-212ENST00000486983 UPP2O95045 317 aa9.44□□□□□ -0.9
SMARCAL1-212ENST00000486983 AGERQ15109 404 aa9.44□□□□□ -0.9
SMARCAL1-212ENST00000486983 PANK3Q9H999 370 aa9.44□□□□□ -0.9
SMARCAL1-212ENST00000486983 REREQ9P2R6 1566 aa9.44□□□□□ -0.9
SMARCAL1-212ENST00000486983 PPLO60437 1756 aa9.44□□□□□ -0.9
SMARCAL1-212ENST00000486983 ADGRB1O14514 1584 aa9.43□□□□□ -0.9
SMARCAL1-212ENST00000486983 ERVK-7P63135 1459 aa9.43□□□□□ -0.9
SMARCAL1-212ENST00000486983 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-212ENST00000486983 FSHRP23945 695 aa9.42□□□□□ -0.9
SMARCAL1-212ENST00000486983 BPHLQ86WA6 291 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-212ENST00000486983 TMEM151AQ8N4L1 468 aa9.42□□□□□ -0.9
SMARCAL1-212ENST00000486983 ZBTB3Q9H5J0 574 aa9.42□□□□□ -0.9
SMARCAL1-212ENST00000486983 ZFYVE9O95405 1425 aa9.41□□□□□ -0.9
SMARCAL1-212ENST00000486983 ADGRF5Q8IZF2 1346 aa9.41□□□□□ -0.9
SMARCAL1-212ENST00000486983 SPTLC1O15269 473 aa9.41□□□□□ -0.9
SMARCAL1-212ENST00000486983 RASSF7Q02833 373 aa9.41□□□□□ -0.9
SMARCAL1-212ENST00000486983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCAL1-212ENST00000486983 CNTNAP3BQ96NU0 1288 aa9.41□□□□□ -0.9
SMARCAL1-212ENST00000486983 C1QTNF2Q9BXJ5 285 aa9.41□□□□□ -0.9
SMARCAL1-212ENST00000486983 CNTNAP3Q9BZ76 1288 aa9.41□□□□□ -0.9
SMARCAL1-212ENST00000486983 GDF11O95390 407 aa9.4□□□□□ -0.9
SMARCAL1-212ENST00000486983 CABLES1Q8TDN4 633 aa9.4□□□□□ -0.9
SMARCAL1-212ENST00000486983 KNSTRNQ9Y448 316 aa9.4□□□□□ -0.9
SMARCAL1-212ENST00000486983 USP32Q8NFA0 1604 aa9.4□□□□□ -0.9
SMARCAL1-212ENST00000486983 AGLP35573 1532 aa9.4□□□□□ -0.91
SMARCAL1-212ENST00000486983 NEXMIFQ5QGS0 1516 aa9.4□□□□□ -0.91
SMARCAL1-212ENST00000486983 PUS7Q96PZ0 661 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-212ENST00000486983 ADAMTS8Q9UP79 889 aa9.39□□□□□ -0.91
SMARCAL1-212ENST00000486983 SIGLEC1Q9BZZ2 1709 aa9.39□□□□□ -0.91
SMARCAL1-212ENST00000486983 CFAP70Q5T0N1 1121 aa9.38□□□□□ -0.91
SMARCAL1-212ENST00000486983 BARGINQ6ZT62 677 aa9.38□□□□□ -0.91
SMARCAL1-212ENST00000486983 SH3RF1Q7Z6J0 888 aa9.38□□□□□ -0.91
SMARCAL1-212ENST00000486983 TSEN34Q9BSV6 310 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-212ENST00000486983 C14orf93Q9H972 538 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-212ENST00000486983 MAP4K5Q9Y4K4 846 aa9.38□□□□□ -0.91
SMARCAL1-212ENST00000486983 CENPJQ9HC77 1338 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-212ENST00000486983 QRICH2Q9H0J4 1663 aa9.37□□□□□ -0.91
SMARCAL1-212ENST00000486983 RNF225M0QZC1 329 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-212ENST00000486983 PTSQ03393 145 aa9.37□□□□□ -0.91
SMARCAL1-212ENST00000486983 DIXDC1Q155Q3 683 aa9.37□□□□□ -0.91
SMARCAL1-212ENST00000486983 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.37□□□□□ -0.91
SMARCAL1-212ENST00000486983 CC2D1BQ5T0F9 858 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-212ENST00000486983 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-212ENST00000486983 TTLL8A6PVC2 850 aa9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms