RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 UNC5CLQ8IV45 518 aa12.05□□□□□ -0.48
POLR1A-208ENST00000486964 NUTM2AQ8IVF1 878 aaPredicted RBP12.05□□□□□ -0.48
POLR1A-208ENST00000486964 BCL9LQ86UU0 1499 aa12.05□□□□□ -0.48
POLR1A-208ENST00000486964 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
POLR1A-208ENST00000486964 RXRBP28702 533 aa12.04□□□□□ -0.48
POLR1A-208ENST00000486964 CABP4P57796 275 aa12.04□□□□□ -0.48
POLR1A-208ENST00000486964 STK31Q9BXU1 1019 aa12.04□□□□□ -0.48
POLR1A-208ENST00000486964 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
POLR1A-208ENST00000486964 NRAPQ86VF7 1730 aa12.04□□□□□ -0.48
POLR1A-208ENST00000486964 EXOC5O00471 708 aa12.03□□□□□ -0.48
POLR1A-208ENST00000486964 SLC39A6Q13433 755 aa12.03□□□□□ -0.48
POLR1A-208ENST00000486964 PDIA6Q15084 440 aa12.03□□□□□ -0.48
POLR1A-208ENST00000486964 VPS72Q15906 364 aa12.03□□□□□ -0.48
POLR1A-208ENST00000486964 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
POLR1A-208ENST00000486964 ITPRIPQ8IWB1 547 aa12.03□□□□□ -0.48
POLR1A-208ENST00000486964 DDX54Q8TDD1 881 aaKnown RBP12.03□□□□□ -0.48
POLR1A-208ENST00000486964 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
POLR1A-208ENST00000486964 FLIIQ13045 1269 aa12.03□□□□□ -0.48
POLR1A-208ENST00000486964 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
POLR1A-208ENST00000486964 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
POLR1A-208ENST00000486964 PRAMEF22A3QJZ6 481 aa12.02□□□□□ -0.49
POLR1A-208ENST00000486964 HDAC1Q13547 482 aaPredicted RBP12.02□□□□□ -0.49
POLR1A-208ENST00000486964 SHANK3Q9BYB0 1731 aa12.02□□□□□ -0.49
POLR1A-208ENST00000486964 NWD2Q9ULI1 1742 aa12.01□□□□□ -0.49
POLR1A-208ENST00000486964 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
POLR1A-208ENST00000486964 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
POLR1A-208ENST00000486964 LRP10Q7Z4F1 713 aa12.01□□□□□ -0.49
POLR1A-208ENST00000486964 SKAP1Q86WV1 359 aa12.01□□□□□ -0.49
POLR1A-208ENST00000486964 FMNL2Q96PY5 1086 aa12.01□□□□□ -0.49
POLR1A-208ENST00000486964 PHAXQ9H814 394 aaKnown RBP12.01□□□□□ -0.49
POLR1A-208ENST00000486964 CHPF2Q9P2E5 772 aa12.01□□□□□ -0.49
POLR1A-208ENST00000486964 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
POLR1A-208ENST00000486964 PLCH1Q4KWH8 1693 aa12.01□□□□□ -0.49
POLR1A-208ENST00000486964 AFF2P51816 1311 aa12□□□□□ -0.49
POLR1A-208ENST00000486964 EIF2S2P20042 333 aaKnown RBP12□□□□□ -0.49
POLR1A-208ENST00000486964 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
POLR1A-208ENST00000486964 PIGBQ92521 554 aa12□□□□□ -0.49
POLR1A-208ENST00000486964 NGLY1Q96IV0 654 aa12□□□□□ -0.49
POLR1A-208ENST00000486964 DDX21Q9NR30 783 aaKnown RBP eCLIP12□□□□□ -0.49
POLR1A-208ENST00000486964 USP16Q9Y5T5 823 aa12□□□□□ -0.49
POLR1A-208ENST00000486964 F6X3S4 739 aa11.99□□□□□ -0.49
POLR1A-208ENST00000486964 NECTIN2Q92692 538 aa11.99□□□□□ -0.49
POLR1A-208ENST00000486964 PROSER3Q2NL68 480 aa11.98□□□□□ -0.49
POLR1A-208ENST00000486964 TTC5Q8N0Z6 440 aa11.98□□□□□ -0.49
POLR1A-208ENST00000486964 MARCH10Q8NA82 808 aaPredicted RBP11.98□□□□□ -0.49
POLR1A-208ENST00000486964 C8orf37Q96NL8 207 aa11.98□□□□□ -0.49
POLR1A-208ENST00000486964 HYPKQ9NX55 129 aa11.98□□□□□ -0.49
POLR1A-208ENST00000486964 GLI3P10071 1580 aa11.98□□□□□ -0.49
POLR1A-208ENST00000486964 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
POLR1A-208ENST00000486964 FKBP5Q13451 457 aaPredicted RBP11.97□□□□□ -0.49
POLR1A-208ENST00000486964 DDB1Q16531 1140 aa11.97□□□□□ -0.49
POLR1A-208ENST00000486964 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
POLR1A-208ENST00000486964 VSIG10Q8N0Z9 540 aa11.97□□□□□ -0.49
POLR1A-208ENST00000486964 ATG3Q9NT62 314 aa11.97□□□□□ -0.49
POLR1A-208ENST00000486964 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
POLR1A-208ENST00000486964 BCL9O00512 1426 aa11.97□□□□□ -0.49
POLR1A-208ENST00000486964 ERBB4Q15303 1308 aa11.97□□□□□ -0.49
POLR1A-208ENST00000486964 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
POLR1A-208ENST00000486964 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.49
POLR1A-208ENST00000486964 SMC5Q8IY18 1101 aa11.96□□□□□ -0.49
POLR1A-208ENST00000486964 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
POLR1A-208ENST00000486964 PXDNLA1KZ92 1463 aa11.96□□□□□ -0.5
POLR1A-208ENST00000486964 ADCY9O60503 1353 aa11.96□□□□□ -0.5
POLR1A-208ENST00000486964 ANXA1P04083 346 aa11.95□□□□□ -0.5
POLR1A-208ENST00000486964 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
POLR1A-208ENST00000486964 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
POLR1A-208ENST00000486964 KSR2Q6VAB6 950 aa11.95□□□□□ -0.5
POLR1A-208ENST00000486964 TBC1D32Q96NH3 1257 aa11.95□□□□□ -0.5
POLR1A-208ENST00000486964 USP21Q9UK80 565 aa11.95□□□□□ -0.5
POLR1A-208ENST00000486964 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
POLR1A-208ENST00000486964 CACNA1FO60840 1977 aa11.95□□□□□ -0.5
POLR1A-208ENST00000486964 PI4KAP2A4QPH2 592 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 EIF5BO60841 1220 aaKnown RBP11.94□□□□□ -0.5
POLR1A-208ENST00000486964 NBPF14Q5TI25 921 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 NBPF10Q6P3W6 841 aaKnown RBP11.94□□□□□ -0.5
POLR1A-208ENST00000486964 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
POLR1A-208ENST00000486964 NBPF15Q8N660 670 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 PI4KAP1Q8N8J0 262 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 DNAAF4Q8WXU2 420 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 MEIS3Q99687 375 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 PAPPAQ13219 1627 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
POLR1A-208ENST00000486964 ANKRD44Q8N8A2 993 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 TEX13AQ9BXU3 409 aaPredicted RBP11.94□□□□□ -0.5
POLR1A-208ENST00000486964 QTRT2Q9H974 415 aaKnown RBP11.94□□□□□ -0.5
POLR1A-208ENST00000486964 PDZRN3Q9UPQ7 1066 aa11.94□□□□□ -0.5
POLR1A-208ENST00000486964 WNK3Q9BYP7 1800 aa11.93□□□□□ -0.5
POLR1A-208ENST00000486964 UBR2Q8IWV8 1755 aa11.93□□□□□ -0.5
POLR1A-208ENST00000486964 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
POLR1A-208ENST00000486964 SLC4A10Q6U841 1118 aa11.93□□□□□ -0.5
POLR1A-208ENST00000486964 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
POLR1A-208ENST00000486964 ATRNO75882 1429 aa11.92□□□□□ -0.5
POLR1A-208ENST00000486964 ALDH1L1O75891 902 aa11.92□□□□□ -0.5
POLR1A-208ENST00000486964 GNAI3P08754 354 aa11.92□□□□□ -0.5
POLR1A-208ENST00000486964 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms