RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 ZNF827Q17R98 1081 aa18.98■□□□□ 0.63
APH1A-208ENST00000486720 CCDC87Q9NVE4 849 aa18.98■□□□□ 0.63
APH1A-208ENST00000486720 SLFN5Q08AF3 891 aa18.97■□□□□ 0.63
APH1A-208ENST00000486720 FLAD1Q8NFF5 587 aa18.97■□□□□ 0.63
APH1A-208ENST00000486720 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
APH1A-208ENST00000486720 TFCP2L1Q9NZI6 479 aa18.97■□□□□ 0.63
APH1A-208ENST00000486720 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
APH1A-208ENST00000486720 LAMB4A4D0S4 1761 aa18.96■□□□□ 0.63
APH1A-208ENST00000486720 PRAMEF22A3QJZ6 481 aa18.96■□□□□ 0.63
APH1A-208ENST00000486720 GNPATO15228 680 aa18.96■□□□□ 0.63
APH1A-208ENST00000486720 DUSP27Q5VZP5 1158 aa18.96■□□□□ 0.63
APH1A-208ENST00000486720 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
APH1A-208ENST00000486720 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
APH1A-208ENST00000486720 KRT24Q2M2I5 525 aa18.95■□□□□ 0.62
APH1A-208ENST00000486720 INTS5Q6P9B9 1019 aaKnown RBP18.95■□□□□ 0.62
APH1A-208ENST00000486720 ERBB4Q15303 1308 aa18.95■□□□□ 0.62
APH1A-208ENST00000486720 ADRA2BP18089 450 aa18.94■□□□□ 0.62
APH1A-208ENST00000486720 SSFA2P28290 1259 aa18.94■□□□□ 0.62
APH1A-208ENST00000486720 C8orf58Q8NAV2 365 aa18.94■□□□□ 0.62
APH1A-208ENST00000486720 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
APH1A-208ENST00000486720 R3HDM1Q15032 1099 aaKnown RBP18.93■□□□□ 0.62
APH1A-208ENST00000486720 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
APH1A-208ENST00000486720 HDGFL1Q5TGJ6 251 aa18.93■□□□□ 0.62
APH1A-208ENST00000486720 NPM2Q86SE8 214 aaKnown RBP18.93■□□□□ 0.62
APH1A-208ENST00000486720 CDCA7LQ96GN5 454 aa18.93■□□□□ 0.62
APH1A-208ENST00000486720 ZBTB1Q9Y2K1 713 aa18.93■□□□□ 0.62
APH1A-208ENST00000486720 ELL2O00472 640 aaPredicted RBP18.92■□□□□ 0.62
APH1A-208ENST00000486720 A1BGP04217 495 aa18.92■□□□□ 0.62
APH1A-208ENST00000486720 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
APH1A-208ENST00000486720 IL6STP40189 918 aaPredicted RBP18.92■□□□□ 0.62
APH1A-208ENST00000486720 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
APH1A-208ENST00000486720 TRMT2AQ8IZ69 625 aaKnown RBP18.92■□□□□ 0.62
APH1A-208ENST00000486720 QSER1Q2KHR3 1735 aa18.91■□□□□ 0.62
APH1A-208ENST00000486720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.91■□□□□ 0.62
APH1A-208ENST00000486720 TRAPPC3LQ5T215 181 aa18.91■□□□□ 0.62
APH1A-208ENST00000486720 PNPLA7Q6ZV29 1317 aa18.91■□□□□ 0.62
APH1A-208ENST00000486720 A0A087WZG4 1122 aa18.9■□□□□ 0.62
APH1A-208ENST00000486720 PHF14O94880 888 aa18.9■□□□□ 0.62
APH1A-208ENST00000486720 UBR3Q6ZT12 1888 aa18.89■□□□□ 0.61
APH1A-208ENST00000486720 EIF5P55010 431 aaKnown RBP18.89■□□□□ 0.61
APH1A-208ENST00000486720 CCDC30Q5VVM6 783 aa18.89■□□□□ 0.61
APH1A-208ENST00000486720 TSPYL6Q8N831 410 aa18.89■□□□□ 0.61
APH1A-208ENST00000486720 MYH14Q7Z406 1995 aaKnown RBP18.88■□□□□ 0.61
APH1A-208ENST00000486720 PSDA5PKW4 1024 aaPredicted RBP18.88■□□□□ 0.61
APH1A-208ENST00000486720 NBPF26B4DH59 902 aa18.88■□□□□ 0.61
APH1A-208ENST00000486720 CT47B1P0C2W7 299 aaPredicted RBP18.88■□□□□ 0.61
APH1A-208ENST00000486720 NBPF10Q6P3W6 841 aaKnown RBP18.88■□□□□ 0.61
APH1A-208ENST00000486720 NBPF15Q8N660 670 aa18.88■□□□□ 0.61
APH1A-208ENST00000486720 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
APH1A-208ENST00000486720 DBF4Q9UBU7 674 aaPredicted RBP18.88■□□□□ 0.61
APH1A-208ENST00000486720 COL15A1P39059 1388 aa18.88■□□□□ 0.61
APH1A-208ENST00000486720 MSH5O43196 834 aa18.87■□□□□ 0.61
APH1A-208ENST00000486720 VAMP4O75379 141 aa18.87■□□□□ 0.61
APH1A-208ENST00000486720 RFC4P35249 363 aa18.87■□□□□ 0.61
APH1A-208ENST00000486720 COL23A1Q86Y22 540 aaPredicted RBP18.87■□□□□ 0.61
APH1A-208ENST00000486720 SLC16A10Q8TF71 515 aa18.87■□□□□ 0.61
APH1A-208ENST00000486720 YTHDC1Q96MU7 727 aaKnown RBP18.87■□□□□ 0.61
APH1A-208ENST00000486720 DDX21Q9NR30 783 aaKnown RBP eCLIP18.87■□□□□ 0.61
APH1A-208ENST00000486720 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
APH1A-208ENST00000486720 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
APH1A-208ENST00000486720 AMIGO3Q86WK7 504 aa18.86■□□□□ 0.61
APH1A-208ENST00000486720 ARHGEF1Q92888 912 aaKnown RBP18.86■□□□□ 0.61
APH1A-208ENST00000486720 ZNF428Q96B54 188 aa18.86■□□□□ 0.61
APH1A-208ENST00000486720 STK31Q9BXU1 1019 aa18.86■□□□□ 0.61
APH1A-208ENST00000486720 MYL6BP14649 208 aa18.85■□□□□ 0.61
APH1A-208ENST00000486720 PIP4K2AP48426 406 aaPredicted RBP18.85■□□□□ 0.61
APH1A-208ENST00000486720 PDIA6Q15084 440 aa18.85■□□□□ 0.61
APH1A-208ENST00000486720 HYPKQ9NX55 129 aa18.85■□□□□ 0.61
APH1A-208ENST00000486720 CHPF2Q9P2E5 772 aa18.85■□□□□ 0.61
APH1A-208ENST00000486720 ZPR1O75312 459 aa18.84■□□□□ 0.61
APH1A-208ENST00000486720 USP42Q9H9J4 1324 aaKnown RBP18.83■□□□□ 0.61
APH1A-208ENST00000486720 SMIM5Q71RC9 77 aa18.83■□□□□ 0.6
APH1A-208ENST00000486720 DZIP3Q86Y13 1208 aaKnown RBP18.83■□□□□ 0.6
APH1A-208ENST00000486720 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
APH1A-208ENST00000486720 KIF6Q6ZMV9 814 aa18.82■□□□□ 0.6
APH1A-208ENST00000486720 ARXQ96QS3 562 aa18.82■□□□□ 0.6
APH1A-208ENST00000486720 CASZ1Q86V15 1759 aa18.82■□□□□ 0.6
APH1A-208ENST00000486720 RGL2O15211 777 aa18.81■□□□□ 0.6
APH1A-208ENST00000486720 PROSER3Q2NL68 480 aa18.81■□□□□ 0.6
APH1A-208ENST00000486720 LRP10Q7Z4F1 713 aa18.81■□□□□ 0.6
APH1A-208ENST00000486720 MTFR1LQ9H019 292 aa18.81■□□□□ 0.6
APH1A-208ENST00000486720 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
APH1A-208ENST00000486720 ANXA1P04083 346 aa18.8■□□□□ 0.6
APH1A-208ENST00000486720 PDGFDQ9GZP0 370 aaPredicted RBP18.8■□□□□ 0.6
APH1A-208ENST00000486720 TBC1D2BQ9UPU7 963 aa18.8■□□□□ 0.6
APH1A-208ENST00000486720 ALDH1L2Q3SY69 923 aa18.79■□□□□ 0.6
APH1A-208ENST00000486720 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
APH1A-208ENST00000486720 COPS6Q7L5N1 327 aa18.79■□□□□ 0.6
APH1A-208ENST00000486720 NLGN1Q8N2Q7 840 aa18.79■□□□□ 0.6
APH1A-208ENST00000486720 XAGE3Q8WTP9 111 aa18.79■□□□□ 0.6
APH1A-208ENST00000486720 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
APH1A-208ENST00000486720 ZNF652Q9Y2D9 606 aa18.79■□□□□ 0.6
APH1A-208ENST00000486720 ERVV-1B6SEH8 477 aa18.78■□□□□ 0.6
APH1A-208ENST00000486720 TCERG1O14776 1098 aaKnown RBP18.78■□□□□ 0.6
APH1A-208ENST00000486720 CAMTA2O94983 1202 aa18.78■□□□□ 0.6
APH1A-208ENST00000486720 ZBTB7AO95365 584 aa18.78■□□□□ 0.6
APH1A-208ENST00000486720 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
APH1A-208ENST00000486720 GYS1P13807 737 aa18.78■□□□□ 0.6
APH1A-208ENST00000486720 AIMP1Q12904 312 aaKnown RBP18.78■□□□□ 0.6
APH1A-208ENST00000486720 MAP3K15Q6ZN16 1313 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms