RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 RRAGCQ9HB90 399 aa7.6□□□□□ -1.19
R3HDM1-217ENST00000486532 NDFIP2Q9NV92 336 aa7.6□□□□□ -1.19
R3HDM1-217ENST00000486532 COG6Q9Y2V7 657 aa7.6□□□□□ -1.19
R3HDM1-217ENST00000486532 ATXN7O15265 892 aaPredicted RBP7.59□□□□□ -1.19
R3HDM1-217ENST00000486532 BNIP3LO60238 219 aa7.59□□□□□ -1.19
R3HDM1-217ENST00000486532 SKIP12755 728 aa7.59□□□□□ -1.19
R3HDM1-217ENST00000486532 ARSJQ5FYB0 599 aaPredicted RBP7.59□□□□□ -1.19
R3HDM1-217ENST00000486532 ZCCHC2Q9C0B9 1178 aaKnown RBP7.59□□□□□ -1.19
R3HDM1-217ENST00000486532 AVENQ9NQS1 362 aaPredicted RBP7.59□□□□□ -1.19
R3HDM1-217ENST00000486532 CABP1Q9NZU7 370 aa7.59□□□□□ -1.19
R3HDM1-217ENST00000486532 SERTAD1Q9UHV2 236 aa7.59□□□□□ -1.19
R3HDM1-217ENST00000486532 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
R3HDM1-217ENST00000486532 TRIM50Q86XT4 487 aa7.58□□□□□ -1.2
R3HDM1-217ENST00000486532 KRTAP4-8Q9BYQ9 185 aa7.58□□□□□ -1.2
R3HDM1-217ENST00000486532 A0A1W2PNR3 127 aa7.57□□□□□ -1.2
R3HDM1-217ENST00000486532 TMEM229AB2RXF0 380 aa7.57□□□□□ -1.2
R3HDM1-217ENST00000486532 STAU1O95793 577 aaKnown RBP7.57□□□□□ -1.2
R3HDM1-217ENST00000486532 GTF2IP78347 998 aa7.57□□□□□ -1.2
R3HDM1-217ENST00000486532 PSME1Q06323 249 aa7.57□□□□□ -1.2
R3HDM1-217ENST00000486532 PLA2G4EQ3MJ16 856 aa7.57□□□□□ -1.2
R3HDM1-217ENST00000486532 ALG2Q9H553 416 aa7.57□□□□□ -1.2
R3HDM1-217ENST00000486532 GPC6Q9Y625 555 aaPredicted RBP7.57□□□□□ -1.2
R3HDM1-217ENST00000486532 ATP4AP20648 1035 aa7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 ATP1A2P50993 1020 aa7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 LAMC2Q13753 1193 aa7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 BICDL1Q6ZP65 573 aa7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 SPOCK3Q9BQ16 436 aa7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 DNAAF2Q9NVR5 837 aaKnown RBP7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 NOP53Q9NZM5 478 aaKnown RBP7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 GGA1Q9UJY5 639 aa7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 PCDHGA11Q9Y5H2 935 aa7.56□□□□□ -1.2
R3HDM1-217ENST00000486532 SHISA8B8ZZ34 492 aa7.55□□□□□ -1.2
R3HDM1-217ENST00000486532 GNB5O14775 395 aa7.55□□□□□ -1.2
R3HDM1-217ENST00000486532 FAM157BP0CG42 384 aa7.55□□□□□ -1.2
R3HDM1-217ENST00000486532 ADH6P28332 368 aa7.55□□□□□ -1.2
R3HDM1-217ENST00000486532 CTBSQ01459 385 aa7.55□□□□□ -1.2
R3HDM1-217ENST00000486532 SAMD5Q5TGI4 173 aa7.55□□□□□ -1.2
R3HDM1-217ENST00000486532 NEUROD4Q9HD90 331 aa7.55□□□□□ -1.2
R3HDM1-217ENST00000486532 IQSEC3Q9UPP2 1182 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-217ENST00000486532 EPXP11678 715 aa7.54□□□□□ -1.2
R3HDM1-217ENST00000486532 UBTFP17480 764 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-217ENST00000486532 C2CD2LO14523 706 aa7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 KHNYNO15037 678 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 MAPTP10636 758 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 TNP2Q05952 138 aa7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 NCOA4Q13772 614 aa7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 ZIC5Q96T25 663 aa7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 SCHIP1Q9P0W5 487 aaPredicted RBP7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 PRR12Q9ULL5 1215 aa7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-217ENST00000486532 NEURL1BA8MQ27 555 aa7.52□□□□□ -1.21
R3HDM1-217ENST00000486532 USP17L5A8MUK1 530 aa7.52□□□□□ -1.21
R3HDM1-217ENST00000486532 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
R3HDM1-217ENST00000486532 TEAD4Q15561 434 aa7.52□□□□□ -1.21
R3HDM1-217ENST00000486532 PLEKHM2Q8IWE5 1019 aa7.52□□□□□ -1.21
R3HDM1-217ENST00000486532 BTBD6Q96KE9 485 aa7.52□□□□□ -1.21
R3HDM1-217ENST00000486532 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
R3HDM1-217ENST00000486532 DCDC2BA2VCK2 349 aa7.51□□□□□ -1.21
R3HDM1-217ENST00000486532 C1orf229Q6ZS94 237 aaPredicted RBP7.51□□□□□ -1.21
R3HDM1-217ENST00000486532 ZNF295-AS1Q8N0V1 137 aa7.51□□□□□ -1.21
R3HDM1-217ENST00000486532 ZNF358Q9NW07 568 aa7.51□□□□□ -1.21
R3HDM1-217ENST00000486532 PROCP04070 461 aa7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 NOS2P35228 1153 aa7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 NEUROD1Q13562 356 aa7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 GRIN2CQ14957 1233 aa7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 ZNF468Q5VIY5 522 aaPredicted RBP7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 L3MBTL2Q969R5 705 aa7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 ANKIB1Q9P2G1 1089 aa7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 ZNF232Q9UNY5 417 aa7.5□□□□□ -1.21
R3HDM1-217ENST00000486532 SERTM1A2A2V5 107 aa7.49□□□□□ -1.21
R3HDM1-217ENST00000486532 M0R2N6 131 aa7.49□□□□□ -1.21
R3HDM1-217ENST00000486532 ITGB2P05107 769 aa7.49□□□□□ -1.21
R3HDM1-217ENST00000486532 CD33P20138 364 aa7.49□□□□□ -1.21
R3HDM1-217ENST00000486532 ALAS2P22557 587 aa7.49□□□□□ -1.21
R3HDM1-217ENST00000486532 SPDYE3A6NKU9 549 aa7.48□□□□□ -1.21
R3HDM1-217ENST00000486532 K7ELQ4 463 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-217ENST00000486532 PSMA6P60900 246 aaKnown RBP7.48□□□□□ -1.21
R3HDM1-217ENST00000486532 LINC00114Q6XXX2 140 aa7.48□□□□□ -1.21
R3HDM1-217ENST00000486532 CHSY3Q70JA7 882 aa7.48□□□□□ -1.21
R3HDM1-217ENST00000486532 LARGE2Q8N3Y3 721 aa7.48□□□□□ -1.21
R3HDM1-217ENST00000486532 PALM3A6NDB9 673 aaPredicted RBP7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 EML1O00423 815 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 EFSO43281 561 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 ATP9BO43861 1147 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 DGKGP49619 791 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 HIF1AQ16665 826 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 C1orf53Q5VUE5 145 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 CCDC102BQ68D86 513 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 SLC9A9Q8IVB4 645 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 PSMG3-AS1Q96PY0 264 aa7.47□□□□□ -1.21
R3HDM1-217ENST00000486532 KRBA1A5PL33 1030 aa7.46□□□□□ -1.22
R3HDM1-217ENST00000486532 USP17L3A6NCW0 530 aa7.46□□□□□ -1.22
R3HDM1-217ENST00000486532 USP17L4A6NCW7 530 aa7.46□□□□□ -1.22
R3HDM1-217ENST00000486532 TXLNAP40222 546 aa7.46□□□□□ -1.22
R3HDM1-217ENST00000486532 EPHA4P54764 986 aa7.46□□□□□ -1.22
R3HDM1-217ENST00000486532 USP17L2Q6R6M4 530 aa7.46□□□□□ -1.22
R3HDM1-217ENST00000486532 USP17L1Q7RTZ2 530 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms