RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 IP6K1Q92551 441 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 FEZ2Q9UHY8 353 aaPredicted RBP9.55□□□□□ -0.88
MECP2-209ENST00000486506 ROBO1Q9Y6N7 1651 aa9.54□□□□□ -0.88
MECP2-209ENST00000486506 NBPF10Q6P3W6 841 aaKnown RBP9.54□□□□□ -0.88
MECP2-209ENST00000486506 LRRC59Q96AG4 307 aaKnown RBP9.54□□□□□ -0.88
MECP2-209ENST00000486506 BSDC1Q9NW68 430 aaPredicted RBP9.54□□□□□ -0.88
MECP2-209ENST00000486506 MED1Q15648 1581 aaPredicted RBP9.54□□□□□ -0.88
MECP2-209ENST00000486506 NFAT5O94916 1531 aa9.54□□□□□ -0.88
MECP2-209ENST00000486506 SSR1P43307 286 aaKnown RBP9.54□□□□□ -0.88
MECP2-209ENST00000486506 RNF217Q8TC41 542 aa9.54□□□□□ -0.88
MECP2-209ENST00000486506 PHACTR3Q96KR7 559 aa9.54□□□□□ -0.88
MECP2-209ENST00000486506 PLEKHF1Q96S99 279 aa9.54□□□□□ -0.88
MECP2-209ENST00000486506 EYA1Q99502 592 aa9.54□□□□□ -0.88
MECP2-209ENST00000486506 OGFRQ9NZT2 677 aa9.54□□□□□ -0.88
MECP2-209ENST00000486506 ALS2Q96Q42 1657 aa9.54□□□□□ -0.88
MECP2-209ENST00000486506 KIF16BQ96L93 1317 aa9.53□□□□□ -0.88
MECP2-209ENST00000486506 KIF1CO43896 1103 aaKnown RBP9.53□□□□□ -0.88
MECP2-209ENST00000486506 FCHSD2O94868 740 aa9.53□□□□□ -0.88
MECP2-209ENST00000486506 NOP2P46087 812 aaKnown RBP9.53□□□□□ -0.88
MECP2-209ENST00000486506 RBM25P49756 843 aaKnown RBP9.53□□□□□ -0.88
MECP2-209ENST00000486506 CREBRFQ8IUR6 639 aa9.53□□□□□ -0.88
MECP2-209ENST00000486506 USHBP1Q8N6Y0 703 aa9.53□□□□□ -0.88
MECP2-209ENST00000486506 KIAA0232Q92628 1395 aa9.53□□□□□ -0.88
MECP2-209ENST00000486506 MAPK8IP3Q9UPT6 1336 aa9.53□□□□□ -0.88
MECP2-209ENST00000486506 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
MECP2-209ENST00000486506 SLFN14P0C7P3 912 aa9.52□□□□□ -0.88
MECP2-209ENST00000486506 OTUD6BQ8N6M0 293 aa9.52□□□□□ -0.88
MECP2-209ENST00000486506 DONSONQ9NYP3 566 aa9.52□□□□□ -0.88
MECP2-209ENST00000486506 SLIT3O75094 1523 aa9.52□□□□□ -0.88
MECP2-209ENST00000486506 PRDM11Q9NQV5 511 aa9.52□□□□□ -0.89
MECP2-209ENST00000486506 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
MECP2-209ENST00000486506 PDCL2Q8N4E4 241 aa9.52□□□□□ -0.89
MECP2-209ENST00000486506 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
MECP2-209ENST00000486506 UPF2Q9HAU5 1272 aaKnown RBP9.52□□□□□ -0.89
MECP2-209ENST00000486506 KIF24Q5T7B8 1368 aa9.51□□□□□ -0.89
MECP2-209ENST00000486506 ZKSCAN8Q15776 578 aaPredicted RBP9.51□□□□□ -0.89
MECP2-209ENST00000486506 ICE2Q659A1 982 aa9.51□□□□□ -0.89
MECP2-209ENST00000486506 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
MECP2-209ENST00000486506 ZKSCAN5Q9Y2L8 839 aa9.51□□□□□ -0.89
MECP2-209ENST00000486506 RAD50Q92878 1312 aa9.51□□□□□ -0.89
MECP2-209ENST00000486506 NASPP49321 788 aaPredicted RBP9.51□□□□□ -0.89
MECP2-209ENST00000486506 NBPF5PQ86XG9 351 aaPredicted RBP9.51□□□□□ -0.89
MECP2-209ENST00000486506 RTL1A6NKG5 1358 aa9.51□□□□□ -0.89
MECP2-209ENST00000486506 USP54Q70EL1 1684 aa9.51□□□□□ -0.89
MECP2-209ENST00000486506 NHSL1Q5SYE7 1610 aa9.5□□□□□ -0.89
MECP2-209ENST00000486506 TMPOP42166 694 aaKnown RBP9.5□□□□□ -0.89
MECP2-209ENST00000486506 MNS1Q8NEH6 495 aa9.5□□□□□ -0.89
MECP2-209ENST00000486506 IGSF1Q8N6C5 1336 aa9.5□□□□□ -0.89
MECP2-209ENST00000486506 GUCY2CP25092 1073 aa9.5□□□□□ -0.89
MECP2-209ENST00000486506 SKOR2Q2VWA4 1001 aaPredicted RBP9.5□□□□□ -0.89
MECP2-209ENST00000486506 ERBB3P21860 1342 aa9.5□□□□□ -0.89
MECP2-209ENST00000486506 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 CASC1Q6TDU7 716 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 MPNDQ8N594 471 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 LTN1O94822 1766 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
MECP2-209ENST00000486506 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
MECP2-209ENST00000486506 DHX16O60231 1041 aaKnown RBP9.49□□□□□ -0.89
MECP2-209ENST00000486506 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
MECP2-209ENST00000486506 THUMPD2Q9BTF0 503 aaKnown RBP9.49□□□□□ -0.89
MECP2-209ENST00000486506 BCL2L13Q9BXK5 485 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.49□□□□□ -0.89
MECP2-209ENST00000486506 CHMP5Q9NZZ3 219 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 FAM83GA6ND36 823 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 ADAMTS2O95450 1211 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 GAS2L3Q86XJ1 694 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 TBC1D2Q9BYX2 928 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 NLRP2Q9NX02 1062 aa9.49□□□□□ -0.89
MECP2-209ENST00000486506 ZNF521Q96K83 1311 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 ZNF853P0CG23 659 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 SGSM3Q96HU1 749 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 AHDC1Q5TGY3 1603 aaPredicted RBP9.48□□□□□ -0.89
MECP2-209ENST00000486506 GOLGA2Q08379 1002 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 TERF2Q15554 542 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 MED4Q9NPJ6 270 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 RSPH14Q9UHP6 348 aa9.48□□□□□ -0.89
MECP2-209ENST00000486506 CPDO75976 1380 aa9.47□□□□□ -0.89
MECP2-209ENST00000486506 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
MECP2-209ENST00000486506 HSP90AB1P08238 724 aaKnown RBP9.47□□□□□ -0.89
MECP2-209ENST00000486506 CALRP27797 417 aaKnown RBP9.47□□□□□ -0.89
MECP2-209ENST00000486506 TRIM35Q9UPQ4 493 aa9.47□□□□□ -0.89
MECP2-209ENST00000486506 SEC24BO95487 1268 aa9.47□□□□□ -0.89
MECP2-209ENST00000486506 TDO2P48775 406 aa9.47□□□□□ -0.89
MECP2-209ENST00000486506 GOLGB1Q14789 3259 aaKnown RBP9.47□□□□□ -0.89
MECP2-209ENST00000486506 PHRF1Q9P1Y6 1649 aaKnown RBP9.47□□□□□ -0.89
MECP2-209ENST00000486506 KDRP35968 1356 aa9.47□□□□□ -0.89
MECP2-209ENST00000486506 DCTN1Q14203 1278 aa9.46□□□□□ -0.89
MECP2-209ENST00000486506 NFE2L2Q16236 605 aa9.46□□□□□ -0.89
MECP2-209ENST00000486506 MTHFSDQ2M296 383 aaKnown RBP9.46□□□□□ -0.89
MECP2-209ENST00000486506 ZNF526Q8TF50 670 aaPredicted RBP9.46□□□□□ -0.89
MECP2-209ENST00000486506 PDLIM2Q96JY6 352 aa9.46□□□□□ -0.89
MECP2-209ENST00000486506 RASSF4Q9H2L5 321 aa9.46□□□□□ -0.89
MECP2-209ENST00000486506 ELL2O00472 640 aaPredicted RBP9.45□□□□□ -0.9
MECP2-209ENST00000486506 TSR2Q969E8 191 aaKnown RBP9.45□□□□□ -0.9
MECP2-209ENST00000486506 BTG4Q9NY30 223 aa9.45□□□□□ -0.9
MECP2-209ENST00000486506 HSPA1LP34931 641 aa9.45□□□□□ -0.9
MECP2-209ENST00000486506 TOM1L2Q6ZVM7 507 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms