RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TSPYL6Q8N831 410 aa18.62■□□□□ 0.57
POLR2J3-204ENST00000486319 ITGB4P16144 1822 aa18.62■□□□□ 0.57
POLR2J3-204ENST00000486319 ZBTB7AO95365 584 aa18.61■□□□□ 0.57
POLR2J3-204ENST00000486319 FTSJ3Q8IY81 847 aaKnown RBP18.61■□□□□ 0.57
POLR2J3-204ENST00000486319 DZIP1LQ8IYY4 767 aaKnown RBP18.61■□□□□ 0.57
POLR2J3-204ENST00000486319 C8orf58Q8NAV2 365 aa18.61■□□□□ 0.57
POLR2J3-204ENST00000486319 COG6Q9Y2V7 657 aa18.61■□□□□ 0.57
POLR2J3-204ENST00000486319 LY75O60449 1722 aa18.61■□□□□ 0.57
POLR2J3-204ENST00000486319 ATP6V1AP38606 617 aa18.6■□□□□ 0.57
POLR2J3-204ENST00000486319 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
POLR2J3-204ENST00000486319 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
POLR2J3-204ENST00000486319 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
POLR2J3-204ENST00000486319 NOB1Q9ULX3 412 aaKnown RBP18.6■□□□□ 0.57
POLR2J3-204ENST00000486319 PAPPAQ13219 1627 aa18.6■□□□□ 0.57
POLR2J3-204ENST00000486319 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
POLR2J3-204ENST00000486319 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
POLR2J3-204ENST00000486319 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
POLR2J3-204ENST00000486319 MRPL50Q8N5N7 158 aaKnown RBP18.59■□□□□ 0.57
POLR2J3-204ENST00000486319 ARHGAP45Q92619 1136 aa18.59■□□□□ 0.57
POLR2J3-204ENST00000486319 CACNA1FO60840 1977 aa18.58■□□□□ 0.57
POLR2J3-204ENST00000486319 CEMIPQ8WUJ3 1361 aa18.58■□□□□ 0.57
POLR2J3-204ENST00000486319 RLBP1P12271 317 aa18.58■□□□□ 0.56
POLR2J3-204ENST00000486319 TRIM27P14373 513 aa18.58■□□□□ 0.56
POLR2J3-204ENST00000486319 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.56
POLR2J3-204ENST00000486319 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.56
POLR2J3-204ENST00000486319 ATF5Q9Y2D1 282 aaPredicted RBP18.58■□□□□ 0.56
POLR2J3-204ENST00000486319 PNPLA7Q6ZV29 1317 aa18.58■□□□□ 0.56
POLR2J3-204ENST00000486319 PTCD1O75127 700 aaKnown RBP18.57■□□□□ 0.56
POLR2J3-204ENST00000486319 CLUAP1Q96AJ1 413 aa18.57■□□□□ 0.56
POLR2J3-204ENST00000486319 AK7Q96M32 723 aa18.57■□□□□ 0.56
POLR2J3-204ENST00000486319 MTFR1LQ9H019 292 aa18.57■□□□□ 0.56
POLR2J3-204ENST00000486319 LRP5O75197 1615 aa18.56■□□□□ 0.56
POLR2J3-204ENST00000486319 ITPK1Q13572 414 aa18.56■□□□□ 0.56
POLR2J3-204ENST00000486319 CENPQQ7L2Z9 268 aaPredicted RBP18.56■□□□□ 0.56
POLR2J3-204ENST00000486319 LINC00116Q8NCU8 138 aa18.56■□□□□ 0.56
POLR2J3-204ENST00000486319 PPP1R1BQ9UD71 204 aaPredicted RBP18.56■□□□□ 0.56
POLR2J3-204ENST00000486319 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
POLR2J3-204ENST00000486319 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
POLR2J3-204ENST00000486319 KDM3BQ7LBC6 1761 aa18.56■□□□□ 0.56
POLR2J3-204ENST00000486319 MSH5O43196 834 aa18.55■□□□□ 0.56
POLR2J3-204ENST00000486319 ADAMTS7Q9UKP4 1686 aa18.55■□□□□ 0.56
POLR2J3-204ENST00000486319 TEFQ10587 303 aa18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 SLC16A10Q8TF71 515 aa18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 SLC4A9Q96Q91 983 aa18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 SCN11AQ9UI33 1791 aa18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 KDM2BQ8NHM5 1336 aa18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 FLAD1Q8NFF5 587 aa18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
POLR2J3-204ENST00000486319 SIPA1L3O60292 1781 aaPredicted RBP18.53■□□□□ 0.56
POLR2J3-204ENST00000486319 SLC39A6Q13433 755 aa18.53■□□□□ 0.56
POLR2J3-204ENST00000486319 CASZ1Q86V15 1759 aa18.52■□□□□ 0.56
POLR2J3-204ENST00000486319 PTGER2P43116 358 aa18.52■□□□□ 0.56
POLR2J3-204ENST00000486319 KRT24Q2M2I5 525 aa18.52■□□□□ 0.56
POLR2J3-204ENST00000486319 API5Q9BZZ5 524 aaKnown RBP18.52■□□□□ 0.56
POLR2J3-204ENST00000486319 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.56
POLR2J3-204ENST00000486319 PHF14O94880 888 aa18.51■□□□□ 0.55
POLR2J3-204ENST00000486319 GNPATO15228 680 aa18.5■□□□□ 0.55
POLR2J3-204ENST00000486319 ITPRIPQ8IWB1 547 aa18.5■□□□□ 0.55
POLR2J3-204ENST00000486319 CHMP4BQ9H444 224 aaKnown RBP18.5■□□□□ 0.55
POLR2J3-204ENST00000486319 MRC1P22897 1456 aa18.5■□□□□ 0.55
POLR2J3-204ENST00000486319 C5P01031 1676 aa18.5■□□□□ 0.55
POLR2J3-204ENST00000486319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.49■□□□□ 0.55
POLR2J3-204ENST00000486319 SMIM5Q71RC9 77 aa18.49■□□□□ 0.55
POLR2J3-204ENST00000486319 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
POLR2J3-204ENST00000486319 TTC5Q8N0Z6 440 aa18.49■□□□□ 0.55
POLR2J3-204ENST00000486319 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
POLR2J3-204ENST00000486319 SSFA2P28290 1259 aa18.49■□□□□ 0.55
POLR2J3-204ENST00000486319 RC3H1Q5TC82 1133 aaKnown RBP18.49■□□□□ 0.55
POLR2J3-204ENST00000486319 SGIP1Q9BQI5 828 aa18.49■□□□□ 0.55
POLR2J3-204ENST00000486319 C4BP0C0L5 1744 aa18.48■□□□□ 0.55
POLR2J3-204ENST00000486319 ABCC4O15439 1325 aa18.48■□□□□ 0.55
POLR2J3-204ENST00000486319 PTPRCP08575 1304 aa18.48■□□□□ 0.55
POLR2J3-204ENST00000486319 TCERG1O14776 1098 aaKnown RBP18.48■□□□□ 0.55
POLR2J3-204ENST00000486319 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
POLR2J3-204ENST00000486319 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
POLR2J3-204ENST00000486319 BTBD11A6QL63 1104 aa18.47■□□□□ 0.55
POLR2J3-204ENST00000486319 POLD1P28340 1107 aa18.47■□□□□ 0.55
POLR2J3-204ENST00000486319 ZNF790Q6PG37 636 aa18.47■□□□□ 0.55
POLR2J3-204ENST00000486319 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
POLR2J3-204ENST00000486319 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
POLR2J3-204ENST00000486319 CCDC30Q5VVM6 783 aa18.46■□□□□ 0.55
POLR2J3-204ENST00000486319 ARXQ96QS3 562 aa18.46■□□□□ 0.55
POLR2J3-204ENST00000486319 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
POLR2J3-204ENST00000486319 HOXB7P09629 217 aa18.45■□□□□ 0.54
POLR2J3-204ENST00000486319 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
POLR2J3-204ENST00000486319 TRAPPC3LQ5T215 181 aa18.45■□□□□ 0.54
POLR2J3-204ENST00000486319 DNAJC10Q8IXB1 793 aa18.45■□□□□ 0.54
POLR2J3-204ENST00000486319 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
POLR2J3-204ENST00000486319 RPS6KA4O75676 772 aa18.44■□□□□ 0.54
POLR2J3-204ENST00000486319 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
POLR2J3-204ENST00000486319 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
POLR2J3-204ENST00000486319 QSER1Q2KHR3 1735 aa18.44■□□□□ 0.54
POLR2J3-204ENST00000486319 EIF4A1P60842 406 aaKnown RBP18.44■□□□□ 0.54
POLR2J3-204ENST00000486319 ZNF496Q96IT1 587 aaPredicted RBP18.44■□□□□ 0.54
POLR2J3-204ENST00000486319 RWDD1Q9H446 243 aaPredicted RBP18.44■□□□□ 0.54
POLR2J3-204ENST00000486319 IGHDP01880 384 aa18.43■□□□□ 0.54
POLR2J3-204ENST00000486319 ADRA2BP18089 450 aa18.43■□□□□ 0.54
POLR2J3-204ENST00000486319 ZBTB40Q9NUA8 1239 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms